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Gene: GABRR2 (gamma-aminobutyric acid type A receptor subunit rho2) Canis lupus familiaris

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Symbol:

GABRR2 (Ensembl: GABRR1)

Name:

gamma-aminobutyric acid type A receptor subunit rho2

RGD ID:

12209268

Description:

ENCODES a protein that exhibits GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN eye photoreceptor cell development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); liver disease (ortholog); sensorineural hearing loss (ortholog); FOUND IN GABA-ergic synapse (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

gamma-aminobutyric acid (GABA) receptor, rho 2; gamma-aminobutyric acid receptor subunit rho-2; gamma-aminobutyric acid type A receptor rho2 subunit

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	48,492,607 - 48,537,961 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	48,431,379 - 48,538,037 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	48,298,970 - 48,344,788 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	49,300,885 - 49,346,708 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	49,236,816 - 49,346,733 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	48,616,699 - 48,663,008 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	48,515,291 - 48,561,811 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	48,708,571 - 48,754,457 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autistic disorder (ISO)

liver disease (ISO)

sensorineural hearing loss (ISO)

toxic encephalopathy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chloride transmembrane transport (IBA,IEA)

chloride transport (IEA)

eye photoreceptor cell development (ISO)

gamma-aminobutyric acid signaling pathway (IEA)

monoatomic ion transmembrane transport (IEA)

monoatomic ion transport (IEA)

visual perception (IEA)

Cellular Component

chloride channel complex (IEA)

GABA-A receptor complex (IBA)

GABA-ergic synapse (ISO)

intracellular vesicle (IEA)

membrane (IEA)

plasma membrane (IEA)

postsynaptic membrane (IEA)

synapse (IEA)

Molecular Function

chloride channel activity (IBA,IEA)

extracellular ligand-gated monoatomic ion channel activity (IEA)

GABA-A receptor activity (IBA,IEA,ISO)

GABA-gated chloride ion channel activity (ISO)

monoatomic ion channel activity (IEA)

protein binding (ISO)

protein domain specific binding (ISO)

transmembrane signaling receptor activity (IEA)

transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

GABRR2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	48,492,607 - 48,537,961 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	48,431,379 - 48,538,037 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	48,298,970 - 48,344,788 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	49,300,885 - 49,346,708 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	49,236,816 - 49,346,733 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	48,616,699 - 48,663,008 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	48,515,291 - 48,561,811 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	48,708,571 - 48,754,457 (-)	NCBI		UU_Cfam_GSD_1.0

GABRR2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	89,254,464 - 89,315,299 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	89,254,464 - 89,315,299 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	89,964,183 - 90,025,018 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	90,023,958 - 90,081,686 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	90,023,957 - 90,081,673	NCBI
Celera	6	90,385,736 - 90,443,478 (-)	NCBI		Celera
Cytogenetic Map	6	q15	ENTREZGENE
HuRef	6	87,183,652 - 87,241,843 (-)	NCBI		HuRef
CHM1_1	6	90,064,781 - 90,122,809 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	90,463,740 - 90,524,560 (-)	NCBI		T2T-CHM13v2.0

Gabrr2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	33,057,715 - 33,095,865 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	33,062,999 - 33,095,865 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	33,057,712 - 33,095,865 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	33,062,999 - 33,095,865 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	33,150,087 - 33,182,840 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	33,391,725 - 33,424,478 (+)	NCBI		MGSCv36	mm8
Celera	4	32,803,825 - 32,840,866 (+)	NCBI		Celera
Cytogenetic Map	4	A5	NCBI
cM Map	4	14.64	NCBI

Gabrr2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	52,242,564 - 52,286,255 (+)	NCBI		GRCr8
mRatBN7.2	5	47,445,280 - 47,489,929 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	47,452,150 - 47,489,809 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	49,598,143 - 49,635,800 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	51,197,326 - 51,234,977 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	51,140,749 - 51,178,468 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	48,303,366 - 48,341,571 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	48,303,366 - 48,341,642 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	52,888,136 - 52,924,364 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	49,349,963 - 49,387,218 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	49,350,141 - 49,387,397 (+)	NCBI
Celera	5	46,209,552 - 46,246,823 (+)	NCBI		Celera
Cytogenetic Map	5	q21	NCBI

GABRR2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	109,328,376 - 109,390,399 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	107,228,568 - 107,290,403 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	87,123,527 - 87,185,547 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	90,398,602 - 90,459,596 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	90,401,811 - 90,459,468 (-)	Ensembl	panpan1.1		panPan2

Gabrr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	83,520,034 - 83,579,800 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936510	2,891,101 - 2,951,071 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936510	2,891,136 - 2,949,428 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GABRR2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	57,286,705 - 57,332,720 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	57,287,265 - 57,332,342 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	64,065,021 - 64,110,481 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GABRR2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	14,015,862 - 14,074,742 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	14,016,672 - 14,073,757 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	190,333,419 - 190,400,995 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gabrr2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624799	4,841,898 - 4,900,172 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624799	4,841,856 - 4,900,704 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in GABRR2
709 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
4	4	4	19	17	13	3	6	3	6	23	16	10	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022426349	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492426	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492427	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038554722	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038554723	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038618592	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038618593	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684151	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684152	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_539039	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000004969 ⟹ ENSCAFP00000004607

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	12	48,431,379 - 48,538,037 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000004973 ⟹ ENSCAFP00000004611

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	12	48,494,612 - 48,538,037 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000044087 ⟹ ENSCAFP00000039258

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	12	48,431,379 - 48,465,463 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845011820 ⟹ ENSCAFP00845009222

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	12	49,236,816 - 49,346,733 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845011881 ⟹ ENSCAFP00845009271

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	12	49,236,816 - 49,271,880 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845011907 ⟹ ENSCAFP00845009289

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	12	49,301,351 - 49,346,733 (-)	Ensembl

RefSeq Acc Id:

XM_022426349 ⟹ XP_022282057

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	12	48,492,607 - 48,527,554 (-)	NCBI
Dog10K_Boxer_Tasha	12	48,298,970 - 48,335,664 (-)	NCBI

Sequence:

show sequence

AGGAGGAATTTTATGAAAACAAAGTTTTCCTGAATAAGCAGCTTGAAGAAAATAGCTGTATCTG
CTCCAGGAGGTCTAAATGCGACATCCTCTCAGCAGGAAGCTCCACGTTGCTTCTCCCTGGAGTG
TCCGGCCCTGCTATCCCGGTGGGCGTGGACGTGCAGGTGGAGAGCCTGGACAGCATCTCGGAGG
TGGACATGGACTTCACCATGACCCTGTACCTGCGGCATTACTGGAAGGATGAGAGGCTGGCCTT
TCCCAGCACGAGCAACAAGAGCATGACCTTCGATGGTCGGCTGGTAAAGAAGATCTGGGTCCCC
GACGTCTTCTTTGTTCACTCCAAAAGGTCTTTCACTCATGACACCACCACTGATAACATCATGC
TGAGGGTGTTTCCGGATGGGCACGTGCTATACAGCATGAGGATTACGGTGACTGCCATGTGCAA
CATGGACTTCAGCCACTTTCCCCTGGACTCCCAGACCTGCTCTTTGGAGCTGGAAAGCTATGCA
TATACAGATGAAGATCTGATGCTGTATTGGAAGAATGGGGACGAATCCTTGAAAACTGATGAGA
AGATCTCCTTGTCCCAGTTTCTGATTCAGAAATTTCACACCACTTCCAGACTGGCCTTCTACAG
CAGCACTGGCTGGTACAACCGTCTGTACATTAACTTCACGTTGCGACGCCACATCTTCTTCTTC
CTCCTCCAAACCTACTTCCCTGCCACCCTGATGGTCATGCTGTCCTGGGTGTCCTTCTGGATCG
ACCGCAGAGCTGTGCCCGCCAGAGTTTCACTGGGTATCACCACGGTGCTGACCATGTCCACCAT
CATCACGGGCGTGAACGCCTCCATGCCCCGCGTCTCCTACATCAAGGCGGTGGACATCTACCTG
TGGGTCAGCTTCGTGTTCGTGTTCCTCTCGGTGCTGGAGTACGCGGCCGTCAACTACCTGACCA
CCGTGCAGGAGCGCAAGGAGCGGAAGCTGCGGGACAAGTTCCCGTGCATGTGTGGAATGCTTCA
CTCGAGAACCATGATGCTGGATGGAAGCTACAGTGAGTCTGAGGCCAACAGTCTGGCTGGATAC
CCAAGAAGCCATATTCTGACAGAAGAAGAAAGACAAGACAAAATAGTGGTCCACCTGGCTCTGA
GCAATGACTCCAACTCCTCCAGGAAGAAGGGGCTTCTGAGGGGCCACATGGGTCTTCGCATCTT
CCAGAACACCCACGCCATTGACAAATACTCCAGGTTGATATTTCCTGCCTCCTACATATTTTTC
AACTTAATTTATTGGTCAGTGTTTTCCTAGGGGTCCGGAGGCTATGACTGGGAAAGGACATGCC
TGGCCAGCTGTCTGCACATGGACCTGCCGACCATGCCCCCCCTCACCAGATAGAGCAACAGCTC
CTGGACCACCATGGCAATGCCCCCCTCACCGGGAGCCCTCCAGCTGCCCTGTCCCTTATCTCAT
GGGTTTGCTCTTCATTAATGCTGTGTTCTGTGTCCTACTTCACGCCTCTTTGGGACTGTCTTCT
TCTGTTCTTGTGTGTAAACCAGTTCACAAGAGCCCCCCCCCCCTATAAAAAATGACTCGAATGC
CTCCTAGATAATCTGAGACCCTAATGAAGCCTAGGATTCAGTTTTGAAGGGACACAGAAGAATA
AAGGGCAAGACTAGGGGCTTTCTGGATAGGAGATGGAAAATAGGATTCAAAATAGGAATAAAAA
AATCTGCAACCCATGCAACTAGATTAAGTGCCTACCTAGGAAGAAAAAAAAAGCTCTTATCCCA
GATAGGAAATGATTTGACCTGTGTGAGTCTGACAACTTGCATGATTTTGCAATCCATTCAACCA
CTCATTAAATATTGAGTACCCACTCTGTGCCTGGTCCTGTGGAAATGAACAAATAGAGGTCTCT
CAGAGAACTTCTCTAAGCCTGCACTCATTCTACATATGGCAGTAGTGCTGCTCTTCTGCCTCCC
TCCAACCCCCACTGACTCCACAGATCCATTCTGTTTGCTGGTGCTTTTACTCCTAGGTCTGTCT
AGGAAAGCATCTCCAGTCTCCTATGAGACCCTTGTGAAGGCAGCTTAAAAACTTCTCTTCTAGA
ATCTCCACGCAGGACAAGTCTAGTGCTGGGGAGAGGGCCAAGGACTTGGTCTTGGGGAGGAAGG
AGCCATGGATCTGCTGTGGAAATGTGTTCCATATTCCAGCCTACTTCTCTTTCTGGGCTTCTCC
CCTATCAGACAGGTGTCCTTAATAATCCTTGTGTCCAAGCCTGGTCCCCACCCCTGGGACTCTA
CCTGACCAGAAATACCCTGCACCTTGAAATGATTTCTCCCTTCCACAAGGTAGTGACTTTCTCT
AATGTGGCTAAACTAAGGTTAGGAAAACAATCTGATTAATGGAATCTACAATAAATCATGAATA
ACCATTTCTCTTATCCGTAATTTAGATCTTTGCTAGTTAACTCAAGTGAACCTCTAATCAGTAG
TATTCGTGGAAATATAAAGAACACAATTTTGAGAAGGGTACCTCCTCTTTCAATTACAGCATGT
GGAATCAGAGGGCTGTTCTGGGAAGTAGAGAAAGAATGCCCAGTTTAGATTTCTTGCTTAATAA
AAGAAATTGTTCTGCTCTTTCTTCCTACCTACAACCCCTTCCACCTTCCTGCTCAGGGTCTGGG
TATCTGGTCCTTTGGTCATGAGTGTACAAATGGTATAGCAAAAGAGAGGATGACCAAATGGTGC
AGCAAAAGAGAGGATGACCCTGCCTTAAGTCAGGCGAGTGCTGGCTTGTGGCGTCTGCTCCACA
GGGGCAGGCAGAGATTTTTAGTTCCTGAGGATTAGAGCTCAGGTGGGTGCCAGAGCCTACTGAA
GTTTATTTTTTTTATTTTTTATTTTTTTTCCTACTGAAGTTTAAAGTCAGGGGCCAGTAGATCC
CTGATCCTCTCCTCCCTCACCACAACTGCCACTTAGCTGCCCTATGCATTCCAGCTTCTCCTCT
CCTTCCTCTTGTCGGTCCCTCATCCATTTCCTCTGGCCTCAGACCAGATTGTGCAACAATCTTA
CTCAGTTGTTTATTGTAATGTTGGTTGCTGTGCTACTATTATAGATTCATGAAACCAACCCTAA
CCCTAATCCTCCCAGCACTGGGATGTCCAGGATATACGAATATCTATAAGTTAAAAAGTGTTAA
GTGGTTCAAAATGTAATGGGAATTCTGAGGAAAGAAAGAATGATTTCCACTGGAAAGACTAGAT
CTAATGGAGAAAACGGCCCCTGAGGTGACCCTTGAAGATTGGAGATTTCGAGAAGCTTTACATG
CTAAATGCACATGTAGAAAAGTACATGCTATCCCACTCTTCATTTAGCTCATGAACTCAGGGTC
ATGAGATGGAGCCCTGAATCAGGCTCT

hide sequence

RefSeq Acc Id:

XM_038492426 ⟹ XP_038348354

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	12	48,616,699 - 48,663,008 (-)	NCBI

RefSeq Acc Id:

XM_038492427 ⟹ XP_038348355

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	12	48,616,699 - 48,653,924 (-)	NCBI

RefSeq Acc Id:

XM_038554722 ⟹ XP_038410650

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	12	48,708,571 - 48,754,457 (-)	NCBI

RefSeq Acc Id:

XM_038554723 ⟹ XP_038410651

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	12	48,708,571 - 48,745,334 (-)	NCBI

RefSeq Acc Id:

XM_038618592 ⟹ XP_038474520

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	12	48,515,291 - 48,561,811 (-)	NCBI

RefSeq Acc Id:

XM_038618593 ⟹ XP_038474521

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	12	48,515,291 - 48,552,686 (-)	NCBI

RefSeq Acc Id:

XM_038684151 ⟹ XP_038540079

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	12	49,300,885 - 49,346,708 (-)	NCBI

RefSeq Acc Id:

XM_038684152 ⟹ XP_038540080

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	12	49,300,885 - 49,337,587 (-)	NCBI

RefSeq Acc Id:

XM_539039 ⟹ XP_539039

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	12	48,492,607 - 48,537,961 (-)	NCBI
Dog10K_Boxer_Tasha	12	48,298,970 - 48,344,788 (-)	NCBI

Sequence:

show sequence

TTTAATCGCAAAAATCCATCTGGCCAGTCATGCTCTTGCAGCCCCTTGGAGAAGCACCGTCACA
AAGCGACAGACTGAATCCATGGTTCAGCCCAGGGGGGTCAGCCCCGCTGCAGGTCACTGGAGAG
CAGCTTGTGGCATCAAAGACGTTCACAGAATGCCTTATTTCACAAGACTCATTTTGTTCTTGTT
TTGCCTGACGGCTCTTGTGGAAAGCAGAAAACCCAAGAGGAAGAGATGGACAGGGCAGCTGGAA
ATGCCCAAGCCAAGTCACCTATATAAGAAGAACCTTGATGTGACCAAAATCCGCAAGGGAAAGC
CTCAGCCACTTCTCAGAGTGGAGGACCACGATTTCTCCATGAGGCCCGCCTTTGGAGGCCCTGC
TATCCCGGTGGGCGTGGACGTGCAGGTGGAGAGCCTGGACAGCATCTCGGAGGTGGACATGGAC
TTCACCATGACCCTGTACCTGCGGCATTACTGGAAGGATGAGAGGCTGGCCTTTCCCAGCACGA
GCAACAAGAGCATGACCTTCGATGGTCGGCTGGTAAAGAAGATCTGGGTCCCCGACGTCTTCTT
TGTTCACTCCAAAAGGTCTTTCACTCATGACACCACCACTGATAACATCATGCTGAGGGTGTTT
CCGGATGGGCACGTGCTATACAGCATGAGGATTACGGTGACTGCCATGTGCAACATGGACTTCA
GCCACTTTCCCCTGGACTCCCAGACCTGCTCTTTGGAGCTGGAAAGCTATGCATATACAGATGA
AGATCTGATGCTGTATTGGAAGAATGGGGACGAATCCTTGAAAACTGATGAGAAGATCTCCTTG
TCCCAGTTTCTGATTCAGAAATTTCACACCACTTCCAGACTGGCCTTCTACAGCAGCACTGGCT
GGTACAACCGTCTGTACATTAACTTCACGTTGCGACGCCACATCTTCTTCTTCCTCCTCCAAAC
CTACTTCCCTGCCACCCTGATGGTCATGCTGTCCTGGGTGTCCTTCTGGATCGACCGCAGAGCT
GTGCCCGCCAGAGTTTCACTGGGTATCACCACGGTGCTGACCATGTCCACCATCATCACGGGCG
TGAACGCCTCCATGCCCCGCGTCTCCTACATCAAGGCGGTGGACATCTACCTGTGGGTCAGCTT
CGTGTTCGTGTTCCTCTCGGTGCTGGAGTACGCGGCCGTCAACTACCTGACCACCGTGCAGGAG
CGCAAGGAGCGGAAGCTGCGGGACAAGTTCCCGTGCATGTGTGGAATGCTTCACTCGAGAACCA
TGATGCTGGATGGAAGCTACAGTGAGTCTGAGGCCAACAGTCTGGCTGGATACCCAAGAAGCCA
TATTCTGACAGAAGAAGAAAGACAAGACAAAATAGTGGTCCACCTGGCTCTGAGCAATGACTCC
AACTCCTCCAGGAAGAAGGGGCTTCTGAGGGGCCACATGGGTCTTCGCATCTTCCAGAACACCC
ACGCCATTGACAAATACTCCAGGTTGATATTTCCTGCCTCCTACATATTTTTCAACTTAATTTA
TTGGTCAGTGTTTTCCTAGGGGTCCGGAGGCTATGACTGGGAAAGGACATGCCTGGCCAGCTGT
CTGCACATGGACCTGCCGACCATGCCCCCCCTCACCAGATAGAGCAACAGCTCCTGGACCACCA
TGGCAATGCCCCCCTCACCGGGAGCCCTCCAGCTGCCCTGTCCCTTATCTCATGGGTTTGCTCT
TCATTAATGCTGTGTTCTGTGTCCTACTTCACGCCTCTTTGGGACTGTCTTCTTCTGTTCTTGT
GTGTAAACCAGTTCACAAGAGCCCCCCCCCCCTATAAAAAATGACTCGAATGCCTCCTAGATAA
TCTGAGACCCTAATGAAGCCTAGGATTCAGTTTTGAAGGGACACAGAAGAATAAAGGGCAAGAC
TAGGGGCTTTCTGGATAGGAGATGGAAAATAGGATTCAAAATAGGAATAAAAAAATCTGCAACC
CATGCAACTAGATTAAGTGCCTACCTAGGAAGAAAAAAAAAGCTCTTATCCCAGATAGGAAATG
ATTTGACCTGTGTGAGTCTGACAACTTGCATGATTTTGCAATCCATTCAACCACTCATTAAATA
TTGAGTACCCACTCTGTGCCTGGTCCTGTGGAAATGAACAAATAGAGGTCTCTCAGAGAACTTC
TCTAAGCCTGCACTCATTCTACATATGGCAGTAGTGCTGCTCTTCTGCCTCCCTCCAACCCCCA
CTGACTCCACAGATCCATTCTGTTTGCTGGTGCTTTTACTCCTAGGTCTGTCTAGGAAAGCATC
TCCAGTCTCCTATGAGACCCTTGTGAAGGCAGCTTAAAAACTTCTCTTCTAGAATCTCCACGCA
GGACAAGTCTAGTGCTGGGGAGAGGGCCAAGGACTTGGTCTTGGGGAGGAAGGAGCCATGGATC
TGCTGTGGAAATGTGTTCCATATTCCAGCCTACTTCTCTTTCTGGGCTTCTCCCCTATCAGACA
GGTGTCCTTAATAATCCTTGTGTCCAAGCCTGGTCCCCACCCCTGGGACTCTACCTGACCAGAA
ATACCCTGCACCTTGAAATGATTTCTCCCTTCCACAAGGTAGTGACTTTCTCTAATGTGGCTAA
ACTAAGGTTAGGAAAACAATCTGATTAATGGAATCTACAATAAATCATGAATAACCATTTCTCT
TATCCGTAATTTAGATCTTTGCTAGTTAACTCAAGTGAACCTCTAATCAGTAGTATTCGTGGAA
ATATAAAGAACACAATTTTGAGAAGGGTACCTCCTCTTTCAATTACAGCATGTGGAATCAGAGG
GCTGTTCTGGGAAGTAGAGAAAGAATGCCCAGTTTAGATTTCTTGCTTAATAAAAGAAATTGTT
CTGCTCTTTCTTCCTACCTACAACCCCTTCCACCTTCCTGCTCAGGGTCTGGGTATCTGGTCCT
TTGGTCATGAGTGTACAAATGGTATAGCAAAAGAGAGGATGACCAAATGGTGCAGCAAAAGAGA
GGATGACCCTGCCTTAAGTCAGGCGAGTGCTGGCTTGTGGCGTCTGCTCCACAGGGGCAGGCAG
AGATTTTTAGTTCCTGAGGATTAGAGCTCAGGTGGGTGCCAGAGCCTACTGAAGTTTATTTTTT
TTATTTTTTATTTTTTTTCCTACTGAAGTTTAAAGTCAGGGGCCAGTAGATCCCTGATCCTCTC
CTCCCTCACCACAACTGCCACTTAGCTGCCCTATGCATTCCAGCTTCTCCTCTCCTTCCTCTTG
TCGGTCCCTCATCCATTTCCTCTGGCCTCAGACCAGATTGTGCAACAATCTTACTCAGTTGTTT
ATTGTAATGTTGGTTGCTGTGCTACTATTATAGATTCATGAAACCAACCCTAACCCTAATCCTC
CCAGCACTGGGATGTCCAGGATATACGAATATCTATAAGTTAAAAAGTGTTAAGTGGTTCAAAA
TGTAATGGGAATTCTGAGGAAAGAAAGAATGATTTCCACTGGAAAGACTAGATCTAATGGAGAA
AACGGCCCCTGAGGTGACCCTTGAAGATTGGAGATTTCGAGAAGCTTTACATGCTAAATGCACA
TGTAGAAAAGTACATGCTATCCCACTCTTCATTTAGCTCATGAACTCAGGGTCATGAGATGGAG
CCCTGAATCAGGCTCT

hide sequence

Protein Sequences


Protein RefSeqs	XP_022282057	(Get FASTA)	NCBI Sequence Viewer
	XP_038348354	(Get FASTA)	NCBI Sequence Viewer
	XP_038348355	(Get FASTA)	NCBI Sequence Viewer
	XP_038410650	(Get FASTA)	NCBI Sequence Viewer
	XP_038410651	(Get FASTA)	NCBI Sequence Viewer
	XP_038474520	(Get FASTA)	NCBI Sequence Viewer
	XP_038474521	(Get FASTA)	NCBI Sequence Viewer
	XP_038540079	(Get FASTA)	NCBI Sequence Viewer
	XP_038540080	(Get FASTA)	NCBI Sequence Viewer
	XP_539039	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000004611.4
	ENSCAFP00030019469.1
	ENSCAFP00040017671.1
	ENSCAFP00845009222.1
	ENSCAFP00845009289
	ENSCAFP00845009289.1

RefSeq Acc Id:	XP_539039 ⟸ XM_539039
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0N069 (UniProtKB/TrEMBL), A0A8P0N610 (UniProtKB/TrEMBL)
- Sequence:	show sequence MVQPRGVSPAAGHWRAACGIKDVHRMPYFTRLILFLFCLTALVESRKPKRKRWTGQLEMPKPSH LYKKNLDVTKIRKGKPQPLLRVEDHDFSMRPAFGGPAIPVGVDVQVESLDSISEVDMDFTMTLY LRHYWKDERLAFPSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLRVFPDGHVL YSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKISLSQFLIQ KFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVS LGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVQERKERKL RDKFPCMCGMLHSRTMMLDGSYSESEANSLAGYPRSHILTEEERQDKIVVHLALSNDSNSSRKK GLLRGHMGLRIFQNTHAIDKYSRLIFPASYIFFNLIYWSVFS hide sequence

RefSeq Acc Id:

XP_022282057 ⟸ XM_022426349

- Peptide Label:

isoform X2

- Sequence:

show sequence

MDFTMTLYLRHYWKDERLAFPSTSNKSMTFDGRLVKKIWVPDVFFVHSKRSFTHDTTTDNIMLR
VFPDGHVLYSMRITVTAMCNMDFSHFPLDSQTCSLELESYAYTDEDLMLYWKNGDESLKTDEKI
SLSQFLIQKFHTTSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDR
RAVPARVSLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTV
QERKERKLRDKFPCMCGMLHSRTMMLDGSYSESEANSLAGYPRSHILTEEERQDKIVVHLALSN
DSNSSRKKGLLRGHMGLRIFQNTHAIDKYSRLIFPASYIFFNLIYWSVFS

hide sequence

Ensembl Acc Id:

ENSCAFP00000004611 ⟸ ENSCAFT00000004973

Ensembl Acc Id:

ENSCAFP00000004607 ⟸ ENSCAFT00000004969

Ensembl Acc Id:

ENSCAFP00000039258 ⟸ ENSCAFT00000044087

RefSeq Acc Id:	XP_038348354 ⟸ XM_038492426
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038348355 ⟸ XM_038492427
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038474520 ⟸ XM_038618592
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038474521 ⟸ XM_038618593
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038540079 ⟸ XM_038684151
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3MT74 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038540080 ⟸ XM_038684152
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038410650 ⟸ XM_038554722
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3MT74 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038410651 ⟸ XM_038554723
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSCAFP00845009289 ⟸ ENSCAFT00845011907

Ensembl Acc Id:

ENSCAFP00845009222 ⟸ ENSCAFT00845011820

Ensembl Acc Id:

ENSCAFP00845009271 ⟸ ENSCAFT00845011881

Protein Domains

Neurotransmitter-gated ion-channel ligand-binding Neurotransmitter-gated ion-channel transmembrane

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000003099	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030012008	UniProtKB/TrEMBL
	ENSCAFG00040011012	UniProtKB/TrEMBL
	ENSCAFG00845006659	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000004973.5	UniProtKB/TrEMBL
	ENSCAFT00030022319.1	UniProtKB/TrEMBL
	ENSCAFT00040020366.1	UniProtKB/TrEMBL
	ENSCAFT00845011820.1	UniProtKB/TrEMBL
	ENSCAFT00845011907	ENTREZGENE
	ENSCAFT00845011907.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.58.390	UniProtKB/TrEMBL
	2.70.170.10	UniProtKB/TrEMBL
InterPro	GABAA/Glycine_rcpt	UniProtKB/TrEMBL
	GABAAa_rho2_rcpt	UniProtKB/TrEMBL
	GABAAa_rho_rcpt	UniProtKB/TrEMBL
	Neur_chan_lig-bd	UniProtKB/TrEMBL
	Neur_chan_lig-bd_sf	UniProtKB/TrEMBL
	Neur_channel	UniProtKB/TrEMBL
	Neuro-gated_channel_TM_sf	UniProtKB/TrEMBL
	Neuro_actylchol_rec	UniProtKB/TrEMBL
	Neurotrans-gated_channel_TM	UniProtKB/TrEMBL
	Neurotransmitter_ion_chnl_CS	UniProtKB/TrEMBL
NCBI Gene	GABRR2	ENTREZGENE
PANTHER	PTHR18945	UniProtKB/TrEMBL
Pfam	Neur_chan_LBD	UniProtKB/TrEMBL
	Neur_chan_memb	UniProtKB/TrEMBL
PRINTS	GABAARECEPTR	UniProtKB/TrEMBL
	GABAARRHO	UniProtKB/TrEMBL
	GABAARRHO2	UniProtKB/TrEMBL
	NRIONCHANNEL	UniProtKB/TrEMBL
PROSITE	NEUROTR_ION_CHANNEL	UniProtKB/TrEMBL
Superfamily-SCOP	SSF63712	UniProtKB/TrEMBL
	SSF90112	UniProtKB/TrEMBL
UniProt	A0A8C0N069	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MT74	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NEZ0_CANLF	UniProtKB/TrEMBL
	A0A8P0N610	ENTREZGENE
UniProt Secondary	A0A8P0N610	UniProtKB/TrEMBL
VGNC ID	VGNC:57240	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-05-11	GABRR2	gamma-aminobutyric acid type A receptor subunit rho2	GABRR2	gamma-aminobutyric acid type A receptor rho2 subunit	Symbol and/or name change	19259463	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD