COL13A1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 4 | 20,838,163 - 20,987,412 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 4 | 20,837,650 - 20,986,962 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 4 | 20,971,110 - 21,119,964 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 4 | 21,113,705 - 21,262,719 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 4 | 21,113,238 - 21,262,795 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 4 | 21,012,409 - 21,161,238 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 4 | 21,216,918 - 21,365,710 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 4 | 21,561,379 - 21,710,027 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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COL13A1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 10 | 69,801,906 - 69,959,144 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 10 | 69,801,880 - 69,964,275 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 10 | 71,561,662 - 71,718,900 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 10 | 71,231,650 - 71,388,909 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 10 | 64,838,564 - 64,996,131 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q22.1 | NCBI | | | | | HuRef | 10 | 65,553,122 - 65,710,673 (+) | NCBI | | HuRef | | | CHM1_1 | 10 | 71,843,392 - 72,000,665 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 10 | 70,670,103 - 70,827,646 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Col13a1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 10 | 61,674,013 - 61,814,985 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 61,674,015 - 61,814,887 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 61,838,234 - 61,979,206 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 61,838,236 - 61,979,108 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 61,301,246 - 61,441,856 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 61,233,855 - 61,374,465 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 62,940,611 - 63,081,159 (-) | NCBI | | Celera | | | Cytogenetic Map | 10 | B4 | NCBI | | | | | cM Map | 10 | 32.29 | NCBI | | | | |
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Col13a1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 20 | 30,326,744 - 30,466,800 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 20 | 29,783,965 - 29,924,116 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 20 | 29,783,965 - 29,924,032 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 20 | 30,794,932 - 30,934,985 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 20 | 30,185,849 - 30,325,902 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 20 | 30,928,630 - 31,068,686 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 20 | 31,456,502 - 31,598,360 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 20 | 31,456,852 - 31,598,118 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 20 | 33,254,962 - 33,395,070 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 20 | 29,208,654 - 29,348,751 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 20 | 31,209,120 - 31,348,066 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | q11 | NCBI | | | | |
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Col13a1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955437 | 21,256,636 - 21,392,814 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955437 | 21,256,410 - 21,393,385 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LOC100973165 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 8 | 82,027,140 - 82,114,312 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 10 | 82,032,461 - 82,119,416 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 10 | 66,277,302 - 66,434,410 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 10 | 68,806,841 - 68,964,088 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 10 | 68,807,425 - 68,963,642 (+) | Ensembl | panpan1.1 | | panPan2 | |
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Col13a1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024407213 | 60,100,636 - 60,239,816 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936521 | 8,588,809 - 8,732,002 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936521 | 8,588,568 - 8,643,786 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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COL13A1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 14 | 72,787,303 - 72,953,095 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 72,786,780 - 72,953,093 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 78,706,033 - 78,871,075 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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COL13A1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 9 | 61,342,482 - 61,500,072 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 9 | 61,344,481 - 61,499,539 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 22,080,101 - 22,237,649 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Col13a1 (Heterocephalus glaber - naked mole-rat) |
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