HAUS6 (HAUS augmin like complex subunit 6) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: HAUS6 (HAUS augmin like complex subunit 6) Canis lupus familiaris
Analyze
Symbol: HAUS6
Name: HAUS augmin like complex subunit 6
RGD ID: 12199733
Description: ENCODES a protein that exhibits microtubule binding (inferred); INVOLVED IN centrosome cycle (inferred); microtubule cytoskeleton organization (inferred); spindle assembly (inferred); ASSOCIATED WITH Familial Prostate Cancer (ortholog); genetic disease (ortholog); Ovarian Neoplasms (ortholog); FOUND IN HAUS complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: HAUS augmin-like complex subunit 6
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11138,889,977 - 38,935,396 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1138,893,544 - 38,935,136 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1137,548,733 - 37,594,172 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01139,823,027 - 39,868,531 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1139,826,096 - 39,868,502 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11138,516,301 - 38,561,685 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01138,311,200 - 38,356,613 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01138,948,287 - 38,993,811 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
HAUS6
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11138,889,977 - 38,935,396 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1138,893,544 - 38,935,136 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1137,548,733 - 37,594,172 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01139,823,027 - 39,868,531 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1139,826,096 - 39,868,502 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11138,516,301 - 38,561,685 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01138,311,200 - 38,356,613 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01138,948,287 - 38,993,811 (-)NCBIUU_Cfam_GSD_1.0
HAUS6
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38919,053,141 - 19,102,904 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl919,053,141 - 19,102,904 (-)EnsemblGRCh38hg38GRCh38
GRCh37919,053,139 - 19,102,902 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36919,043,141 - 19,092,902 (-)NCBINCBI36Build 36hg18NCBI36
Build 34919,043,141 - 19,092,902NCBI
Celera918,979,336 - 19,029,095 (-)NCBICelera
Cytogenetic Map9p22.1NCBI
HuRef919,014,740 - 19,064,601 (-)NCBIHuRef
CHM1_1919,053,124 - 19,102,944 (-)NCBICHM1_1
T2T-CHM13v2.0919,066,006 - 19,115,757 (-)NCBIT2T-CHM13v2.0
Haus6
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39486,497,092 - 86,530,317 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl486,497,092 - 86,530,292 (-)EnsemblGRCm39 Ensembl
GRCm38486,578,855 - 86,612,075 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl486,578,855 - 86,612,055 (-)EnsemblGRCm38mm10GRCm38
MGSCv37486,227,188 - 86,257,926 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36486,052,515 - 86,083,253 (-)NCBIMGSCv36mm8
Celera485,096,066 - 85,126,798 (-)NCBICelera
Cytogenetic Map4C4NCBI
cM Map440.69NCBI
Haus6
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85106,162,526 - 106,201,503 (-)NCBIGRCr8
mRatBN7.25101,116,532 - 101,156,396 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5101,119,300 - 101,153,124 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.05104,944,258 - 104,981,330 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5104,947,427 - 104,980,641 (-)EnsemblRnor6.0rn6Rnor6.0
Celera599,601,274 - 99,638,394 (-)NCBICelera
Cytogenetic Map5q31-q32NCBI
Haus6
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543421,515,274 - 21,557,641 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543421,516,668 - 21,557,565 (-)NCBIChiLan1.0ChiLan1.0
HAUS6
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v211105,431,411 - 105,481,593 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan19105,437,388 - 105,487,537 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0918,874,901 - 18,923,393 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1919,366,079 - 19,417,229 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl919,369,286 - 19,416,766 (-)Ensemblpanpan1.1panPan2
Haus6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947153,326,159 - 153,367,232 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936652994,919 - 1,036,796 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936652995,667 - 1,036,766 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HAUS6
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1203,720,264 - 203,771,138 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11203,720,253 - 203,771,222 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21227,367,363 - 227,415,912 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103219402
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11260,614,681 - 60,667,712 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1260,614,974 - 60,667,850 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366659920,628 - 51,706 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Haus6
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473623,055,561 - 23,098,701 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473623,055,064 - 23,098,976 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in HAUS6
445 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 8
Low 5 5 22 6 6 6 6 6 12 10 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003639358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038681831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038681832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038681833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038681834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038681835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000002503   ⟹   ENSCAFP00000002322
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1138,893,544 - 38,935,136 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845025411   ⟹   ENSCAFP00845020002
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1139,826,096 - 39,868,502 (-)Ensembl
RefSeq Acc Id: XM_003639358   ⟹   XP_003639406
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11138,889,977 - 38,935,396 (-)NCBI
Dog10K_Boxer_Tasha1137,548,733 - 37,594,172 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022425471   ⟹   XP_022281179
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11138,889,977 - 38,932,897 (-)NCBI
Dog10K_Boxer_Tasha1137,548,733 - 37,591,653 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022425472   ⟹   XP_022281180
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11138,889,977 - 38,933,914 (-)NCBI
Dog10K_Boxer_Tasha1137,548,733 - 37,592,693 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038490383   ⟹   XP_038346311
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11138,516,301 - 38,561,685 (-)NCBI
RefSeq Acc Id: XM_038490384   ⟹   XP_038346312
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11138,516,301 - 38,559,171 (-)NCBI
RefSeq Acc Id: XM_038490385   ⟹   XP_038346313
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11138,516,301 - 38,560,213 (-)NCBI
RefSeq Acc Id: XM_038552486   ⟹   XP_038408414
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01138,948,287 - 38,993,811 (-)NCBI
RefSeq Acc Id: XM_038552487   ⟹   XP_038408415
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01138,948,287 - 38,991,294 (-)NCBI
RefSeq Acc Id: XM_038552488   ⟹   XP_038408416
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01138,948,287 - 38,992,338 (-)NCBI
RefSeq Acc Id: XM_038552489   ⟹   XP_038408417
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01138,948,287 - 38,993,236 (-)NCBI
RefSeq Acc Id: XM_038552490   ⟹   XP_038408418
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01138,948,287 - 38,993,236 (-)NCBI
RefSeq Acc Id: XM_038616349   ⟹   XP_038472277
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01138,311,200 - 38,356,613 (-)NCBI
RefSeq Acc Id: XM_038616350   ⟹   XP_038472278
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01138,311,200 - 38,354,113 (-)NCBI
RefSeq Acc Id: XM_038616351   ⟹   XP_038472279
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01138,311,200 - 38,355,153 (-)NCBI
RefSeq Acc Id: XM_038616352   ⟹   XP_038472280
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01138,311,200 - 38,356,032 (-)NCBI
RefSeq Acc Id: XM_038681831   ⟹   XP_038537759
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01139,823,027 - 39,868,531 (-)NCBI
RefSeq Acc Id: XM_038681832   ⟹   XP_038537760
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01139,823,027 - 39,865,922 (-)NCBI
RefSeq Acc Id: XM_038681833   ⟹   XP_038537761
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01139,823,027 - 39,866,965 (-)NCBI
RefSeq Acc Id: XM_038681834   ⟹   XP_038537762
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01139,823,027 - 39,867,956 (-)NCBI
RefSeq Acc Id: XM_038681835   ⟹   XP_038537763
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01139,823,027 - 39,867,956 (-)NCBI
RefSeq Acc Id: XP_003639406   ⟸   XM_003639358
- Peptide Label: isoform X3
- UniProtKB: A0A8C0MNQ7 (UniProtKB/TrEMBL),   A0A8I3NV93 (UniProtKB/TrEMBL),   A0A8C0KFU2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022281180   ⟸   XM_022425472
- Peptide Label: isoform X5
- UniProtKB: A0A8C0KFU2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022281179   ⟸   XM_022425471
- Peptide Label: isoform X4
- UniProtKB: A0A8C0KFU2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000002322   ⟸   ENSCAFT00000002503
RefSeq Acc Id: XP_038346311   ⟸   XM_038490383
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038346313   ⟸   XM_038490385
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038346312   ⟸   XM_038490384
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038472277   ⟸   XM_038616349
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038472280   ⟸   XM_038616352
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038472279   ⟸   XM_038616351
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038472278   ⟸   XM_038616350
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038537759   ⟸   XM_038681831
- Peptide Label: isoform X3
- UniProtKB: A0A8C0MNQ7 (UniProtKB/TrEMBL),   A0A8I3NV93 (UniProtKB/TrEMBL),   A0A8C0KFU2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038537763   ⟸   XM_038681835
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KFU2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038537762   ⟸   XM_038681834
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KFU2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038537761   ⟸   XM_038681833
- Peptide Label: isoform X5
- UniProtKB: A0A8C0KFU2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038537760   ⟸   XM_038681832
- Peptide Label: isoform X4
- UniProtKB: A0A8C0KFU2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408414   ⟸   XM_038552486
- Peptide Label: isoform X3
- UniProtKB: A0A8C0KFU2 (UniProtKB/TrEMBL),   A0A8C0MNQ7 (UniProtKB/TrEMBL),   A0A8I3NV93 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408418   ⟸   XM_038552490
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KFU2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408417   ⟸   XM_038552489
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KFU2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408416   ⟸   XM_038552488
- Peptide Label: isoform X5
- UniProtKB: A0A8C0KFU2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408415   ⟸   XM_038552487
- Peptide Label: isoform X4
- UniProtKB: A0A8C0KFU2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845020002   ⟸   ENSCAFT00845025411

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000001598 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030005883 UniProtKB/TrEMBL
  ENSCAFG00040019094 UniProtKB/TrEMBL
  ENSCAFG00845014208 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000002503.5 UniProtKB/TrEMBL
  ENSCAFT00030010917.1 UniProtKB/TrEMBL
  ENSCAFT00040035460.1 UniProtKB/TrEMBL
  ENSCAFT00845025411 ENTREZGENE
  ENSCAFT00845025411.1 UniProtKB/TrEMBL
InterPro HAUS_6 UniProtKB/TrEMBL
  HAUS_6_N UniProtKB/TrEMBL
KEGG Report cfa:100856608 UniProtKB/TrEMBL
NCBI Gene HAUS6 ENTREZGENE
PANTHER HAUS AUGMIN-LIKE COMPLEX SUBUNIT 6 UniProtKB/TrEMBL
  PTHR16151 UniProtKB/TrEMBL
Pfam HAUS6_N UniProtKB/TrEMBL
UniProt A0A8C0KFU2 ENTREZGENE
  A0A8C0MNQ7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NV93 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:41606 ENTREZGENE