TMEM80 (transmembrane protein 80)

Gene: TMEM80 (transmembrane protein 80) Canis lupus familiaris

Analyze

Symbol:

TMEM80

Name:

transmembrane protein 80

RGD ID:

12193699

Description:

INVOLVED IN non-motile cilium assembly (inferred); ASSOCIATED WITH Chanarin-Dorfman syndrome (ortholog); delta beta-thalassemia (ortholog); developmental and epileptic encephalopathy (ortholog); FOUND IN cell projection (inferred); ciliary transition zone (inferred); membrane (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	25,733,400 - 25,739,682 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	25,404,577 - 25,410,565 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	26,340,253 - 26,346,243 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	18	25,849,767 - 25,855,754 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	25,494,808 - 25,500,795 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	26,107,109 - 26,113,097 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Chanarin-Dorfman syndrome (ISO)

delta beta-thalassemia (ISO)

developmental and epileptic encephalopathy (ISO)

early infantile epileptic encephalopathy (ISO)

genetic disease (ISO)

immunodeficiency 39 (ISO)

neuronal ceroid lipofuscinosis (ISO)

Segawa Syndrome, Autosomal Recessive (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

non-motile cilium assembly (IEA)

Cellular Component

cell projection (IEA)

ciliary transition zone (IEA)

membrane (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

TMEM80
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	25,733,400 - 25,739,682 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	25,404,577 - 25,410,565 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	26,340,253 - 26,346,243 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	18	25,849,767 - 25,855,754 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	25,494,808 - 25,500,795 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	26,107,109 - 26,113,097 (+)	NCBI		UU_Cfam_GSD_1.0

TMEM80
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	695,639 - 705,028 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	695,591 - 705,028 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	695,639 - 705,028 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	685,616 - 694,129 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	768,788 - 772,796 (+)	NCBI		Celera
Cytogenetic Map	11	p15.5	NCBI
HuRef	11	512,004 - 521,571 (+)	NCBI		HuRef
CHM1_1	11	694,513 - 703,947 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	746,506 - 756,028 (+)	NCBI		T2T-CHM13v2.0

Tmem80
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	140,908,046 - 140,917,069 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	140,907,652 - 140,917,069 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	141,328,130 - 141,337,156 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	141,327,739 - 141,337,156 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	148,514,029 - 148,523,054 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	141,179,450 - 141,188,131 (+)	NCBI		MGSCv36	mm8
Celera	7	141,121,879 - 141,130,933 (+)	NCBI		Celera
Cytogenetic Map	7	F5	NCBI
cM Map	7	86.65	NCBI

Tmem80
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	205,865,564 - 205,873,933 (+)	NCBI		GRCr8
mRatBN7.2	1	196,435,999 - 196,444,368 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	196,436,003 - 196,444,367 (+)	Ensembl		mRatBN7.2 Ensembl
mRatBN7.2 Ensembl	1	196,436,003 - 196,444,367 (+)	NCBI		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	204,781,356 - 204,789,707 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	211,908,238 - 211,916,595 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	204,582,376 - 204,590,733 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	214,317,300 - 214,326,293 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	214,317,682 - 214,326,294 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	221,234,413 - 221,243,406 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	201,524,983 - 201,533,592 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	201,679,693 - 201,688,303 (+)	NCBI
Celera	1	194,069,061 - 194,078,054 (+)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI

Tmem80
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955476	11,391,338 - 11,397,819 (-)	NCBI	ChiLan1.0	ChiLan1.0

TMEM80
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	3,089,486 - 3,098,681 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	2,301,773 - 2,310,693 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	709,907 - 719,140 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	754,160 - 764,697 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	754,169 - 763,695 (+)	Ensembl	panpan1.1		panPan2

Tmem80
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	501,046 - 504,469 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936888	501,801 - 504,378 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936888	501,065 - 504,465 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM80
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	428,303 - 433,528 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	428,297 - 433,533 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	240,545 - 245,782 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TMEM80
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	510,440 - 521,231 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666038	97,571,770 - 97,580,989 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmem80
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624766	21,792,819 - 21,795,091 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624766	21,792,724 - 21,798,806 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TMEM80
58 total Variants

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003639662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424046	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424048	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038453903	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038453904	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038453905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500402	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500403	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038562966	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038562967	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038562968	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038562969	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627087	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627090	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_003639662 ⟹ XP_003639710

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	25,733,400 - 25,739,682 (+)	NCBI
Dog10K_Boxer_Tasha	18	25,404,577 - 25,410,565 (+)	NCBI

Sequence:

show sequence

AGGCCGCACGAGGCCTTCCGAGCGGCCCCGCGCTATCCCGCCTCAGCGCCTCGGAGGCCTGCGC
GCCCCGTTTCCCCGCAGCGCGGCCGCCGTCTGCGGGGCGGGATCTCGCCGGCCTCCGACGCAGC
GCGGCCGGGCCCGGAGACCCTCTCGCTCAGGCTCCGCCCGCCCCGCCGCGAGCGGGAGCCGAGT
CCGTCCGAGCGGAGCCGAGCGGAGCCGAGCGGCCCCGAGCCCGGGACCCCGAGCCTCGGCTCTC
CGCCTCCTCTTCTACGGAGGCGCCCGAGCGCTGCCGGACGCGCTGAACGGGCCTCGGCCGCGGA
TCGGAATCGACTCCCGAAGCGCGGCAGCCCCTTCGCGAGCAGAGGCGAAAATGGCCGAAGGGTC
GCGAAGAGCGCGGAGCCGAGAGGCTGTCGGGATCGCGGCGGACCCCGGGCGGGGCCGGGCGGCA
AGATGGCTGCCGCGCGGCGAGGGAGAGCATCGTCCACGATGCTCTCGTCCGTGTCTCTGCAAAT
GCTGCTCTGCCTGAGTGGGGCGTATGATGCCCTGTATTTCCTGGCCACGCTGCTCCTGATCATA
TATAAAAGTCAGGTTTTCACTTATCCTTATCCTTACCTGGTGCTCGACCTGAGTCTGCTGCTCC
TCACGGGGATTCTGGAAGTGGCTCGGTTATATCTTGGCACCAAGGGCAACCTGACGGAGGCGGA
GGTGCCGCTGGCCATCAGCCTGGTCCTTACCGCGGGGGGCGCCCTGCTGTCCACCCACTTCCTG
CTCTGGCAGACCCTGGTGCTGCAGGCCGACTCCATCCTCGGTGCCACGCGCCTGGCGCTGCACG
GCCTGGAGGCCGCCCTGCAGCTGGTGGCCATTGCCGCCTTCGTCAGCTAGGCCGCCGGTGCCCG
GCCCCCCCGGATGGCTCCGGACGGAGCCCCCGGTTGCTCGGCTGTGTGCGCTGGCTCCCTTGGG
CGGCCGGGCTGCTGGCCGCGGCCAGGCAGGCTCCGGTGGTGCACGGTGTCGTCGGTGCCGCGCA
GTCTCTCACAACTGCTGGCATCCGCGCTTTCCACACTGGTGCGCGGGGAGCCGGGGCCCCACGG
CTCACGACAGGCCAAGTCCCGCGGGACGTGCACTCGGCTTTGCAGCAGAAAGACAAGAACTGCG
AGCTGTGTGTGTGCTGGGGGGTCCCCGGTCCCCGGGGCTTCTGCAGGAGGCATTCTGGAACCCG
CCACTGCCCGGCCGCGGGCTACCTGTGCGGAGGCACCCTGTCCTGCAGGGCTCCGGGCTCCCAG
CGGCTTCCGTCCGTGTGTCTGTCGCGCACTGTCTGTGTTAGGAGTTGCGTATCCAGGTGTTTTC
TCTGCCCCATATTGTCGAAATAAATGTTTCTACCCCCCCGGATTTCTCCCAGCTAAGGA

hide sequence

RefSeq Acc Id:

XM_038424045 ⟹ XP_038279973

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	26,340,253 - 26,344,800 (+)	NCBI

RefSeq Acc Id:

XM_038424046 ⟹ XP_038279974

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	26,341,248 - 26,344,800 (+)	NCBI

RefSeq Acc Id:

XM_038424047 ⟹ XP_038279975

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	26,340,537 - 26,344,800 (+)	NCBI

RefSeq Acc Id:

XM_038424048 ⟹ XP_038279976

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	26,340,253 - 26,346,243 (+)	NCBI

RefSeq Acc Id:

XM_038453903 ⟹ XP_038309831

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	18	25,404,577 - 25,409,126 (+)	NCBI

RefSeq Acc Id:

XM_038453904 ⟹ XP_038309832

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	18	25,405,572 - 25,409,126 (+)	NCBI

RefSeq Acc Id:

XM_038453905 ⟹ XP_038309833

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	18	25,404,861 - 25,409,126 (+)	NCBI

RefSeq Acc Id:

XM_038500402 ⟹ XP_038356330

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	25,849,767 - 25,854,311 (+)	NCBI

RefSeq Acc Id:

XM_038500403 ⟹ XP_038356331

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	25,850,056 - 25,854,311 (+)	NCBI

RefSeq Acc Id:

XM_038500404 ⟹ XP_038356332

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	25,850,055 - 25,854,311 (+)	NCBI

RefSeq Acc Id:

XM_038500405 ⟹ XP_038356333

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	25,849,767 - 25,855,754 (+)	NCBI

RefSeq Acc Id:

XM_038562966 ⟹ XP_038418894

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	26,107,109 - 26,111,658 (+)	NCBI

RefSeq Acc Id:

XM_038562967 ⟹ XP_038418895

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	26,108,104 - 26,111,658 (+)	NCBI

RefSeq Acc Id:

XM_038562968 ⟹ XP_038418896

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	26,107,393 - 26,111,658 (+)	NCBI

RefSeq Acc Id:

XM_038562969 ⟹ XP_038418897

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	26,107,109 - 26,113,097 (+)	NCBI

RefSeq Acc Id:

XM_038627087 ⟹ XP_038483015

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	25,494,808 - 25,499,352 (+)	NCBI

RefSeq Acc Id:

XM_038627088 ⟹ XP_038483016

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	25,495,803 - 25,499,352 (+)	NCBI

RefSeq Acc Id:

XM_038627089 ⟹ XP_038483017

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	25,495,092 - 25,499,352 (+)	NCBI

RefSeq Acc Id:

XM_038627090 ⟹ XP_038483018

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	25,494,808 - 25,500,795 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_003639710	(Get FASTA)	NCBI Sequence Viewer
	XP_038279973	(Get FASTA)	NCBI Sequence Viewer
	XP_038279974	(Get FASTA)	NCBI Sequence Viewer
	XP_038279975	(Get FASTA)	NCBI Sequence Viewer
	XP_038279976	(Get FASTA)	NCBI Sequence Viewer
	XP_038309831	(Get FASTA)	NCBI Sequence Viewer
	XP_038309832	(Get FASTA)	NCBI Sequence Viewer
	XP_038309833	(Get FASTA)	NCBI Sequence Viewer
	XP_038356330	(Get FASTA)	NCBI Sequence Viewer
	XP_038356331	(Get FASTA)	NCBI Sequence Viewer
	XP_038356332	(Get FASTA)	NCBI Sequence Viewer
	XP_038356333	(Get FASTA)	NCBI Sequence Viewer
	XP_038418894	(Get FASTA)	NCBI Sequence Viewer
	XP_038418895	(Get FASTA)	NCBI Sequence Viewer
	XP_038418896	(Get FASTA)	NCBI Sequence Viewer
	XP_038418897	(Get FASTA)	NCBI Sequence Viewer
	XP_038483015	(Get FASTA)	NCBI Sequence Viewer
	XP_038483016	(Get FASTA)	NCBI Sequence Viewer
	XP_038483017	(Get FASTA)	NCBI Sequence Viewer
	XP_038483018	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000073767.1
	ENSCAFP00040020233.1
	ENSCAFP00845024482.1
	ENSCAFP00845024535.1

RefSeq Acc Id:	XP_003639710 ⟸ XM_003639662
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0YWX0 (UniProtKB/TrEMBL), A0A8I3P4X2 (UniProtKB/TrEMBL)
- Sequence:	show sequence RPHEAFRAAPRYPASAPRRPARPVSPQRGRRLRGGISPASDAARPGPETLSLRLRPPRREREPS PSERSRAEPSGPEPGTPSLGSPPPLLRRRPSAAGRAERASAADRNRLPKRGSPFASRGENGRRV AKSAEPRGCRDRGGPRAGPGGKMAAARRGRASSTMLSSVSLQMLLCLSGAYDALYFLATLLLII YKSQVFTYPYPYLVLDLSLLLLTGILEVARLYLGTKGNLTEAEVPLAISLVLTAGGALLSTHFL LWQTLVLQADSILGATRLALHGLEAALQLVAIAAFVS hide sequence

RefSeq Acc Id:	XP_038356333 ⟸ XM_038500405
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038356330 ⟸ XM_038500402
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038356332 ⟸ XM_038500404
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038356331 ⟸ XM_038500403
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038483018 ⟸ XM_038627090
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038483015 ⟸ XM_038627087
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038483017 ⟸ XM_038627089
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038483016 ⟸ XM_038627088
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038279976 ⟸ XM_038424048
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0YWX0 (UniProtKB/TrEMBL), A0A8I3P4X2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038279973 ⟸ XM_038424045
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038279975 ⟸ XM_038424047
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038279974 ⟸ XM_038424046
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038309831 ⟸ XM_038453903
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038309833 ⟸ XM_038453905
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038309832 ⟸ XM_038453904
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038418897 ⟸ XM_038562969
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0YWX0 (UniProtKB/TrEMBL), A0A8I3P4X2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038418894 ⟸ XM_038562966
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038418896 ⟸ XM_038562968
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038418895 ⟸ XM_038562967
- Peptide Label:	isoform X2

Promoters

RGD ID:

13686467

Promoter ID:

EPDNEW_C4536

Type:

initiation region

Name:

TMEM80_1

Description:

transmembrane protein 80

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	25,733,788 - 25,733,848	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000051547	UniProtKB/TrEMBL
	ENSCAFG00040012640	UniProtKB/TrEMBL
	ENSCAFG00845017667	UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000097746.1	UniProtKB/TrEMBL
	ENSCAFT00040023322.1	UniProtKB/TrEMBL
	ENSCAFT00845031277.1	UniProtKB/TrEMBL
	ENSCAFT00845031339.1	UniProtKB/TrEMBL
InterPro	Uncharacterised_TM-17	UniProtKB/TrEMBL
NCBI Gene	TMEM80	ENTREZGENE
PANTHER	PTHR13531	UniProtKB/TrEMBL
	TRANSMEMBRANE PROTEIN 80	UniProtKB/TrEMBL
Pfam	Transmemb_17	UniProtKB/TrEMBL
UniProt	A0A8C0YWX0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3P492_CANLF	UniProtKB/TrEMBL
	A0A8I3P4X2	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:52053	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar