CELF1 (CUGBP Elav-like family member 1) - Rat Genome Database

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Gene: CELF1 (CUGBP Elav-like family member 1) Canis lupus familiaris
Analyze
Symbol: CELF1
Name: CUGBP Elav-like family member 1
RGD ID: 12193478
Description: ENCODES a protein that exhibits BRE binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN cellular response to polyamine macromolecule (ortholog); cerebral cortex development (ortholog); mRNA destabilization (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIc (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasmic stress granule (ortholog); perinucleolar compartment (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: CUG triplet repeat, RNA binding protein 1; CUGBP, Elav-like family member 1; CUGBP1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11842,105,316 - 42,199,017 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1842,105,324 - 42,179,161 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1840,836,673 - 40,929,905 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01842,761,777 - 42,855,073 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1842,761,776 - 42,837,373 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11842,248,478 - 42,341,677 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01841,803,324 - 41,896,565 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01842,532,815 - 42,626,091 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
CELF1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11842,105,316 - 42,199,017 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1842,105,324 - 42,179,161 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1840,836,673 - 40,929,905 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01842,761,777 - 42,855,073 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1842,761,776 - 42,837,373 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11842,248,478 - 42,341,677 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01841,803,324 - 41,896,565 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01842,532,815 - 42,626,091 (+)NCBIUU_Cfam_GSD_1.0
CELF1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381147,465,937 - 47,565,539 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1147,465,933 - 47,565,569 (-)EnsemblGRCh38hg38GRCh38
GRCh371147,487,489 - 47,587,091 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361147,446,521 - 47,531,264 (-)NCBINCBI36Build 36hg18NCBI36
Build 341147,446,521 - 47,472,649NCBI
Celera1147,629,224 - 47,716,566 (-)NCBICelera
Cytogenetic Map11p11.2NCBI
HuRef1147,187,464 - 47,274,966 (-)NCBIHuRef
CHM1_11147,486,759 - 47,574,018 (-)NCBICHM1_1
T2T-CHM13v2.01147,625,789 - 47,725,965 (-)NCBIT2T-CHM13v2.0
Celf1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39290,770,604 - 90,849,842 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl290,770,727 - 90,849,842 (+)EnsemblGRCm39 Ensembl
GRCm38290,940,259 - 91,019,497 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl290,940,382 - 91,019,497 (+)EnsemblGRCm38mm10GRCm38
MGSCv37290,780,615 - 90,857,212 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36290,741,297 - 90,817,894 (+)NCBIMGSCv36mm8
Celera292,325,145 - 92,401,546 (+)NCBICelera
Cytogenetic Map2E1NCBI
cM Map250.44NCBI
Celf1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8397,380,407 - 97,455,253 (+)NCBIGRCr8
mRatBN7.2376,924,591 - 76,999,429 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl376,924,613 - 76,999,426 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx380,456,901 - 80,474,495 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0389,055,917 - 89,073,511 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0386,906,772 - 86,924,389 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0379,768,900 - 79,844,548 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl379,823,945 - 79,842,082 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0386,477,670 - 86,553,301 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4375,360,927 - 75,378,582 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1375,257,298 - 75,274,950 (+)NCBI
Celera376,188,178 - 76,205,831 (+)NCBICelera
Cytogenetic Map3q24NCBI
Celf1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955422742,017 - 817,647 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955422742,017 - 817,649 (+)NCBIChiLan1.0ChiLan1.0
CELF1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2949,670,341 - 49,769,748 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11149,690,101 - 49,789,615 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01147,415,600 - 47,515,254 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11147,967,831 - 48,054,437 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1147,967,831 - 48,008,487 (-)Ensemblpanpan1.1panPan2
Celf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494719,577,453 - 19,673,643 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365621,753,088 - 1,785,310 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365621,699,774 - 1,785,285 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CELF1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl215,066,510 - 15,154,386 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1215,066,518 - 15,161,478 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2216,311,078 - 16,328,018 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CELF1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1117,764,915 - 17,852,974 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl117,817,422 - 17,853,783 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666038115,056,967 - 115,148,559 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Celf1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247671,263,231 - 1,344,896 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CELF1
970 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 20 4 6 4 6 5 12 10 6
Low 2 2 2 1 8
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014121083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014121084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022405448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038424369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038453999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500696 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500699 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038500710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563290 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038563301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627415 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038627423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000013438   ⟹   ENSCAFP00000012432
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1842,147,106 - 42,179,161 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000068071   ⟹   ENSCAFP00000047830
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1842,152,346 - 42,179,161 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000089806   ⟹   ENSCAFP00000056809
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1842,105,324 - 42,179,161 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845036395   ⟹   ENSCAFP00845028489
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1842,761,776 - 42,837,373 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845036503   ⟹   ENSCAFP00845028567
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1842,807,704 - 42,837,365 (+)Ensembl
RefSeq Acc Id: XM_014121083   ⟹   XP_013976558
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11842,152,592 - 42,182,986 (+)NCBI
Dog10K_Boxer_Tasha1840,883,444 - 40,916,670 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014121084   ⟹   XP_013976559
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11842,152,592 - 42,199,017 (+)NCBI
Dog10K_Boxer_Tasha1840,883,944 - 40,929,905 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022405440   ⟹   XP_022261148
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11842,105,316 - 42,182,986 (+)NCBI
Dog10K_Boxer_Tasha1840,883,944 - 40,916,670 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038424353   ⟹   XP_038280281
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,809,102 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424354   ⟹   XP_038280282
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,809,102 - 42,855,073 (+)NCBI
RefSeq Acc Id: XM_038424355   ⟹   XP_038280283
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,809,102 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424356   ⟹   XP_038280284
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,809,102 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424357   ⟹   XP_038280285
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,809,102 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424358   ⟹   XP_038280286
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,798,227 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424359   ⟹   XP_038280287
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,761,790 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424360   ⟹   XP_038280288
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,779,479 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424361   ⟹   XP_038280289
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,787,791 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424362   ⟹   XP_038280290
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,808,604 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424363   ⟹   XP_038280291
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,761,793 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424364   ⟹   XP_038280292
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,787,794 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424365   ⟹   XP_038280293
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,761,790 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424366   ⟹   XP_038280294
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,761,777 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424367   ⟹   XP_038280295
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,779,470 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424368   ⟹   XP_038280296
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,779,439 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038424369   ⟹   XP_038280297
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01842,779,471 - 42,841,843 (+)NCBI
RefSeq Acc Id: XM_038453999   ⟹   XP_038309927
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,883,944 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038454000   ⟹   XP_038309928
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,883,944 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038454001   ⟹   XP_038309929
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,883,944 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038454002   ⟹   XP_038309930
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,873,082 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038454003   ⟹   XP_038309931
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,836,686 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038454004   ⟹   XP_038309932
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,854,369 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038454005   ⟹   XP_038309933
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,862,673 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038454006   ⟹   XP_038309934
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,836,689 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038454007   ⟹   XP_038309935
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,862,676 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038454008   ⟹   XP_038309936
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,836,686 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038454009   ⟹   XP_038309937
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,836,673 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038454010   ⟹   XP_038309938
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,854,360 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038454011   ⟹   XP_038309939
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,854,329 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038454012   ⟹   XP_038309940
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1840,854,361 - 40,916,670 (+)NCBI
RefSeq Acc Id: XM_038500694   ⟹   XP_038356622
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,295,735 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500695   ⟹   XP_038356623
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,295,735 - 42,341,677 (+)NCBI
RefSeq Acc Id: XM_038500696   ⟹   XP_038356624
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,295,735 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500697   ⟹   XP_038356625
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,295,735 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500698   ⟹   XP_038356626
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,295,735 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500699   ⟹   XP_038356627
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,284,889 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500700   ⟹   XP_038356628
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,248,491 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500701   ⟹   XP_038356629
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,266,178 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500702   ⟹   XP_038356630
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,274,478 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500703   ⟹   XP_038356631
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,295,242 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500704   ⟹   XP_038356632
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,248,494 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500705   ⟹   XP_038356633
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,274,481 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500706   ⟹   XP_038356634
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,248,491 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500707   ⟹   XP_038356635
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,248,478 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500708   ⟹   XP_038356636
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,266,169 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500709   ⟹   XP_038356637
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,266,138 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038500710   ⟹   XP_038356638
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11842,266,170 - 42,328,447 (+)NCBI
RefSeq Acc Id: XM_038563285   ⟹   XP_038419213
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,580,108 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563286   ⟹   XP_038419214
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,580,108 - 42,626,091 (+)NCBI
RefSeq Acc Id: XM_038563287   ⟹   XP_038419215
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,580,108 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563288   ⟹   XP_038419216
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,580,108 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563289   ⟹   XP_038419217
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,580,108 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563290   ⟹   XP_038419218
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,569,245 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563291   ⟹   XP_038419219
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,532,828 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563292   ⟹   XP_038419220
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,550,524 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563293   ⟹   XP_038419221
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,558,836 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563294   ⟹   XP_038419222
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,579,607 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563295   ⟹   XP_038419223
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,532,831 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563296   ⟹   XP_038419224
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,558,839 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563297   ⟹   XP_038419225
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,532,828 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563298   ⟹   XP_038419226
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,532,815 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563299   ⟹   XP_038419227
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,550,515 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563300   ⟹   XP_038419228
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,550,484 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038563301   ⟹   XP_038419229
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01842,550,516 - 42,612,848 (+)NCBI
RefSeq Acc Id: XM_038627406   ⟹   XP_038483334
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,850,583 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627408   ⟹   XP_038483336
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,850,583 - 41,896,565 (+)NCBI
RefSeq Acc Id: XM_038627409   ⟹   XP_038483337
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,850,583 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627410   ⟹   XP_038483338
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,850,583 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627411   ⟹   XP_038483339
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,850,583 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627412   ⟹   XP_038483340
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,839,732 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627413   ⟹   XP_038483341
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,803,337 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627414   ⟹   XP_038483342
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,821,011 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627415   ⟹   XP_038483343
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,829,309 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627416   ⟹   XP_038483344
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,850,097 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627417   ⟹   XP_038483345
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,803,340 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627418   ⟹   XP_038483346
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,829,312 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627419   ⟹   XP_038483347
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,803,337 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627420   ⟹   XP_038483348
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,803,324 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627421   ⟹   XP_038483349
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,821,002 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627422   ⟹   XP_038483350
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,820,971 - 41,883,311 (+)NCBI
RefSeq Acc Id: XM_038627423   ⟹   XP_038483351
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01841,821,003 - 41,883,311 (+)NCBI
Protein Sequences
Protein RefSeqs XP_013976558 (Get FASTA)   NCBI Sequence Viewer  
  XP_013976559 (Get FASTA)   NCBI Sequence Viewer  
  XP_022261148 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280281 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280282 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280283 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280284 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280285 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280286 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280287 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280288 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280289 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280290 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280291 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280292 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280293 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280294 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280295 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280296 (Get FASTA)   NCBI Sequence Viewer  
  XP_038280297 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309927 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309928 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309929 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309930 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309931 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309932 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309933 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309934 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309935 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309936 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309937 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309938 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309939 (Get FASTA)   NCBI Sequence Viewer  
  XP_038309940 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356622 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356623 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356624 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356625 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356626 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356627 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356628 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356629 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356630 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356631 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356632 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356633 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356634 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356635 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356636 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356637 (Get FASTA)   NCBI Sequence Viewer  
  XP_038356638 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419213 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419214 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419215 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419216 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419217 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419218 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419219 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419220 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419221 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419222 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419223 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419224 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419225 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419226 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419227 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419228 (Get FASTA)   NCBI Sequence Viewer  
  XP_038419229 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483334 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483336 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483337 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483338 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483339 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483340 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483341 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483342 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483343 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483344 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483345 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483346 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483347 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483348 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483349 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483350 (Get FASTA)   NCBI Sequence Viewer  
  XP_038483351 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000047830.1
  ENSCAFP00000056809.2
  ENSCAFP00030007165.1
  ENSCAFP00030007198.1
  ENSCAFP00040025256.1
  ENSCAFP00040025355.1
  ENSCAFP00040025399.1
  ENSCAFP00845028489
  ENSCAFP00845028489.1
  ENSCAFP00845028567
  ENSCAFP00845028567.1
RefSeq Acc Id: XP_013976559   ⟸   XM_014121084
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013976558   ⟸   XM_014121083
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022261148   ⟸   XM_022405440
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000047830   ⟸   ENSCAFT00000068071
RefSeq Acc Id: ENSCAFP00000012432   ⟸   ENSCAFT00000013438
RefSeq Acc Id: ENSCAFP00000056809   ⟸   ENSCAFT00000089806
RefSeq Acc Id: XP_038356635   ⟸   XM_038500707
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038356628   ⟸   XM_038500700
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038356634   ⟸   XM_038500706
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038356632   ⟸   XM_038500704
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038356637   ⟸   XM_038500709
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038356636   ⟸   XM_038500708
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038356638   ⟸   XM_038500710
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038356629   ⟸   XM_038500701
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038356630   ⟸   XM_038500702
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038356633   ⟸   XM_038500705
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038356627   ⟸   XM_038500699
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038356631   ⟸   XM_038500703
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038356623   ⟸   XM_038500695
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038356622   ⟸   XM_038500694
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038356625   ⟸   XM_038500697
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038356624   ⟸   XM_038500696
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038356626   ⟸   XM_038500698
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038483348   ⟸   XM_038627420
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038483341   ⟸   XM_038627413
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038483347   ⟸   XM_038627419
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038483345   ⟸   XM_038627417
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038483350   ⟸   XM_038627422
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038483349   ⟸   XM_038627421
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038483351   ⟸   XM_038627423
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038483342   ⟸   XM_038627414
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038483343   ⟸   XM_038627415
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038483346   ⟸   XM_038627418
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038483340   ⟸   XM_038627412
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038483344   ⟸   XM_038627416
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038483336   ⟸   XM_038627408
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038483334   ⟸   XM_038627406
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038483338   ⟸   XM_038627410
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038483337   ⟸   XM_038627409
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038483339   ⟸   XM_038627411
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038280294   ⟸   XM_038424366
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280287   ⟸   XM_038424359
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280293   ⟸   XM_038424365
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280291   ⟸   XM_038424363
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280296   ⟸   XM_038424368
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280295   ⟸   XM_038424367
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280297   ⟸   XM_038424369
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280288   ⟸   XM_038424360
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280289   ⟸   XM_038424361
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280292   ⟸   XM_038424364
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280286   ⟸   XM_038424358
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280290   ⟸   XM_038424362
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280282   ⟸   XM_038424354
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280281   ⟸   XM_038424353
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280284   ⟸   XM_038424356
- Peptide Label: isoform X3
- UniProtKB: A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280283   ⟸   XM_038424355
- Peptide Label: isoform X2
- UniProtKB: A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038280285   ⟸   XM_038424357
- Peptide Label: isoform X4
- UniProtKB: A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309937   ⟸   XM_038454009
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309931   ⟸   XM_038454003
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309936   ⟸   XM_038454008
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309934   ⟸   XM_038454006
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309939   ⟸   XM_038454011
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309938   ⟸   XM_038454010
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309940   ⟸   XM_038454012
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309932   ⟸   XM_038454004
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309933   ⟸   XM_038454005
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309935   ⟸   XM_038454007
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309930   ⟸   XM_038454002
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309928   ⟸   XM_038454000
- Peptide Label: isoform X3
- UniProtKB: A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309927   ⟸   XM_038453999
- Peptide Label: isoform X2
- UniProtKB: A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038309929   ⟸   XM_038454001
- Peptide Label: isoform X4
- UniProtKB: A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419226   ⟸   XM_038563298
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419219   ⟸   XM_038563291
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419225   ⟸   XM_038563297
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419223   ⟸   XM_038563295
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419228   ⟸   XM_038563300
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419227   ⟸   XM_038563299
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419229   ⟸   XM_038563301
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SQP7 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419220   ⟸   XM_038563292
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419221   ⟸   XM_038563293
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419224   ⟸   XM_038563296
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419218   ⟸   XM_038563290
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419222   ⟸   XM_038563294
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419214   ⟸   XM_038563286
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419213   ⟸   XM_038563285
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R7W5 (UniProtKB/TrEMBL),   A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419216   ⟸   XM_038563288
- Peptide Label: isoform X3
- UniProtKB: A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419215   ⟸   XM_038563287
- Peptide Label: isoform X2
- UniProtKB: A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038419217   ⟸   XM_038563289
- Peptide Label: isoform X4
- UniProtKB: A0A8I3PEA4 (UniProtKB/TrEMBL),   A0A8P0T8Y8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845028567   ⟸   ENSCAFT00845036503
RefSeq Acc Id: ENSCAFP00845028489   ⟸   ENSCAFT00845036395
Protein Domains
Post-SET   RRM


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000008452 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030004404 UniProtKB/TrEMBL
  ENSCAFG00040015798 UniProtKB/TrEMBL
  ENSCAFG00845020631 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000068071.2 UniProtKB/TrEMBL
  ENSCAFT00000089806.2 UniProtKB/TrEMBL
  ENSCAFT00030008158.1 UniProtKB/TrEMBL
  ENSCAFT00030008196.1 UniProtKB/TrEMBL
  ENSCAFT00040029069.1 UniProtKB/TrEMBL
  ENSCAFT00040029179.1 UniProtKB/TrEMBL
  ENSCAFT00040029225.1 UniProtKB/TrEMBL
  ENSCAFT00845036395 ENTREZGENE
  ENSCAFT00845036395.1 UniProtKB/TrEMBL
  ENSCAFT00845036503 ENTREZGENE
  ENSCAFT00845036503.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/TrEMBL
InterPro CELF1/2_RRM1 UniProtKB/TrEMBL
  CELF1/2_RRM2 UniProtKB/TrEMBL
  CELF1/2_RRM3 UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/TrEMBL
  Post-SET_dom UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/TrEMBL
  RRM_dom UniProtKB/TrEMBL
NCBI Gene CELF1 ENTREZGENE
PANTHER CUGBP ELAV-LIKE FAMILY MEMBER 1 UniProtKB/TrEMBL
  RNA BINDING PROTEIN UniProtKB/TrEMBL
Pfam RRM_1 UniProtKB/TrEMBL
PROSITE POST_SET UniProtKB/TrEMBL
  RRM UniProtKB/TrEMBL
SMART RRM UniProtKB/TrEMBL
Superfamily-SCOP SSF54928 UniProtKB/TrEMBL
UniProt A0A8C0MBP8_CANLF UniProtKB/TrEMBL
  A0A8C0R7W5 ENTREZGENE
  A0A8C0SQP7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SQQ7_CANLF UniProtKB/TrEMBL
  A0A8I3PD83_CANLF UniProtKB/TrEMBL
  A0A8I3PEA4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0T8Y8 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:39093 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-02-01 CELF1  CUGBP Elav-like family member 1    CUGBP, Elav-like family member 1  Symbol and/or name change 5135510 APPROVED