PCP2 (Purkinje cell protein 2) - Rat Genome Database

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Gene: PCP2 (Purkinje cell protein 2) Canis lupus familiaris
Analyze
Symbol: PCP2
Name: Purkinje cell protein 2
RGD ID: 12192689
Description: ENCODES a protein that exhibits GTPase regulator activity (inferred); guanyl-nucleotide exchange factor activity (inferred); INVOLVED IN rhodopsin mediated signaling pathway (ortholog); ASSOCIATED WITH familial hemophagocytic lymphohistiocytosis 5 (ortholog); genetic disease (ortholog); mucolipidosis type IV (ortholog); FOUND IN neuronal cell body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Purkinje cell protein 2 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12052,407,707 - 52,413,061 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2052,407,776 - 52,409,628 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2052,211,780 - 52,217,150 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02052,937,009 - 52,942,382 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2052,937,078 - 52,938,930 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12052,140,808 - 52,146,178 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02052,584,397 - 52,589,765 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02052,815,402 - 52,820,769 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PCP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12052,407,707 - 52,413,061 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2052,407,776 - 52,409,628 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2052,211,780 - 52,217,150 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02052,937,009 - 52,942,382 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2052,937,078 - 52,938,930 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12052,140,808 - 52,146,178 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02052,584,397 - 52,589,765 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02052,815,402 - 52,820,769 (-)NCBIUU_Cfam_GSD_1.0
PCP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38197,631,615 - 7,637,006 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl197,631,611 - 7,633,719 (-)EnsemblGRCh38hg38GRCh38
GRCh37197,696,501 - 7,698,605 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36197,602,507 - 7,604,570 (-)NCBINCBI36Build 36hg18NCBI36
Celera197,567,691 - 7,569,754 (-)NCBICelera
Cytogenetic Map19p13.2NCBI
HuRef197,366,217 - 7,368,354 (-)NCBIHuRef
CHM1_1197,696,252 - 7,698,385 (-)NCBICHM1_1
T2T-CHM13v2.0197,632,498 - 7,637,891 (-)NCBIT2T-CHM13v2.0
Pcp2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3983,673,369 - 3,675,547 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl83,673,371 - 3,675,545 (-)EnsemblGRCm39 Ensembl
GRCm3883,623,369 - 3,625,547 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl83,623,371 - 3,625,545 (-)EnsemblGRCm38mm10GRCm38
MGSCv3783,623,371 - 3,625,545 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3683,623,371 - 3,625,282 (-)NCBIMGSCv36mm8
Celera83,853,700 - 3,855,874 (-)NCBICelera
Cytogenetic Map8A1.1NCBI
cM Map81.92NCBI
Pcp2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8126,479,554 - 6,481,550 (-)NCBIGRCr8
mRatBN7.2121,681,659 - 1,683,899 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl121,681,659 - 1,683,899 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx122,348,255 - 2,350,030 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0122,971,828 - 2,973,603 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0121,742,787 - 1,744,561 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0122,172,378 - 2,174,674 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl122,172,378 - 2,174,131 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0124,334,710 - 4,337,006 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4122,529,953 - 2,531,706 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1122,529,954 - 2,531,703 (+)NCBI
Celera123,537,435 - 3,539,188 (-)NCBICelera
Cytogenetic Map12p12NCBI
Pcp2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555631,625,254 - 1,628,776 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555631,625,249 - 1,628,776 (+)NCBIChiLan1.0ChiLan1.0
PCP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22012,302,549 - 12,304,724 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11911,420,138 - 11,422,324 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0196,921,350 - 6,923,618 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1197,776,331 - 7,781,719 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl197,776,331 - 7,779,241 (-)Ensemblpanpan1.1panPan2
Pcp2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118213,151,379 - 213,153,225 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365884,680,060 - 4,683,381 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365884,681,559 - 4,683,443 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PCP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl271,471,417 - 71,519,421 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1271,471,071 - 71,519,394 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2271,913,237 - 71,915,643 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PCP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.167,118,091 - 7,123,489 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl67,116,214 - 7,119,967 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666081738,088 - 743,514 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pcp2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624828713,799 - 715,442 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624828713,796 - 719,287 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PCP2
59 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 1
Low 4 4 21 6 6 6 6 3 10 8 10 5
Below cutoff 1 1 2 2 1

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005632935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014122297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022407101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022407102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022407103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022407104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022407105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428775 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038455210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038455211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038455212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038455213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038504404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038504405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038504406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038504407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038504408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038504409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038504410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038504411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038504412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038504413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038567447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038567448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038567449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038567450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038567451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038567452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038567453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038567454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038567455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038567456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038631595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038631596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038631597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038631598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038631599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038631600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038631601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038631602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038631603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038631604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000029076   ⟹   ENSCAFP00000027036
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2052,407,776 - 52,409,628 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000081536   ⟹   ENSCAFP00000049807
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2052,407,776 - 52,409,121 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845048742   ⟹   ENSCAFP00845038243
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2052,937,078 - 52,938,930 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845048762   ⟹   ENSCAFP00845038257
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2052,937,078 - 52,938,423 (-)Ensembl
RefSeq Acc Id: XM_005632935   ⟹   XP_005632992
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12052,407,707 - 52,409,565 (-)NCBI
Dog10K_Boxer_Tasha2052,211,780 - 52,213,637 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014122297   ⟹   XP_013977772
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12052,407,707 - 52,409,569 (-)NCBI
Dog10K_Boxer_Tasha2052,211,780 - 52,213,640 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022407101   ⟹   XP_022262809
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12052,407,707 - 52,413,061 (-)NCBI
Dog10K_Boxer_Tasha2052,211,780 - 52,217,150 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022407102   ⟹   XP_022262810
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12052,407,707 - 52,412,302 (-)NCBI
Dog10K_Boxer_Tasha2052,211,780 - 52,217,150 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022407103   ⟹   XP_022262811
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12052,407,707 - 52,412,302 (-)NCBI
Dog10K_Boxer_Tasha2052,211,780 - 52,217,150 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022407104   ⟹   XP_022262812
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12052,407,707 - 52,412,302 (-)NCBI
Dog10K_Boxer_Tasha2052,211,780 - 52,217,149 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038428770   ⟹   XP_038284698
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02052,937,009 - 52,942,382 (-)NCBI
RefSeq Acc Id: XM_038428771   ⟹   XP_038284699
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02052,937,009 - 52,939,529 (-)NCBI
RefSeq Acc Id: XM_038428772   ⟹   XP_038284700
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02052,937,009 - 52,942,382 (-)NCBI
RefSeq Acc Id: XM_038428774   ⟹   XP_038284702
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02052,937,009 - 52,938,869 (-)NCBI
RefSeq Acc Id: XM_038428775   ⟹   XP_038284703
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02052,937,009 - 52,938,868 (-)NCBI
RefSeq Acc Id: XM_038428776   ⟹   XP_038284704
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02052,937,009 - 52,938,871 (-)NCBI
RefSeq Acc Id: XM_038428777   ⟹   XP_038284705
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02052,937,009 - 52,938,866 (-)NCBI
RefSeq Acc Id: XM_038455210   ⟹   XP_038311138
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2052,211,780 - 52,217,150 (-)NCBI
RefSeq Acc Id: XM_038455211   ⟹   XP_038311139
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2052,211,780 - 52,217,150 (-)NCBI
RefSeq Acc Id: XM_038455212   ⟹   XP_038311140
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2052,211,780 - 52,213,639 (-)NCBI
RefSeq Acc Id: XM_038455213   ⟹   XP_038311141
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2052,211,780 - 52,213,642 (-)NCBI
RefSeq Acc Id: XM_038504404   ⟹   XP_038360332
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12052,140,808 - 52,146,178 (-)NCBI
RefSeq Acc Id: XM_038504405   ⟹   XP_038360333
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12052,140,808 - 52,146,178 (-)NCBI
RefSeq Acc Id: XM_038504406   ⟹   XP_038360334
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12052,140,808 - 52,146,178 (-)NCBI
RefSeq Acc Id: XM_038504407   ⟹   XP_038360335
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12052,140,808 - 52,146,178 (-)NCBI
RefSeq Acc Id: XM_038504408   ⟹   XP_038360336
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12052,140,808 - 52,146,177 (-)NCBI
RefSeq Acc Id: XM_038504409   ⟹   XP_038360337
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12052,140,808 - 52,146,178 (-)NCBI
RefSeq Acc Id: XM_038504410   ⟹   XP_038360338
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12052,140,808 - 52,142,668 (-)NCBI
RefSeq Acc Id: XM_038504411   ⟹   XP_038360339
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12052,140,808 - 52,142,667 (-)NCBI
RefSeq Acc Id: XM_038504412   ⟹   XP_038360340
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12052,140,808 - 52,142,670 (-)NCBI
RefSeq Acc Id: XM_038504413   ⟹   XP_038360341
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12052,140,808 - 52,142,665 (-)NCBI
RefSeq Acc Id: XM_038567447   ⟹   XP_038423375
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02052,815,402 - 52,820,769 (-)NCBI
RefSeq Acc Id: XM_038567448   ⟹   XP_038423376
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02052,815,402 - 52,820,769 (-)NCBI
RefSeq Acc Id: XM_038567449   ⟹   XP_038423377
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02052,815,402 - 52,820,769 (-)NCBI
RefSeq Acc Id: XM_038567450   ⟹   XP_038423378
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02052,815,402 - 52,820,769 (-)NCBI
RefSeq Acc Id: XM_038567451   ⟹   XP_038423379
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02052,815,402 - 52,820,768 (-)NCBI
RefSeq Acc Id: XM_038567452   ⟹   XP_038423380
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02052,815,402 - 52,820,769 (-)NCBI
RefSeq Acc Id: XM_038567453   ⟹   XP_038423381
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02052,815,402 - 52,817,262 (-)NCBI
RefSeq Acc Id: XM_038567454   ⟹   XP_038423382
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02052,815,402 - 52,817,261 (-)NCBI
RefSeq Acc Id: XM_038567455   ⟹   XP_038423383
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02052,815,402 - 52,817,264 (-)NCBI
RefSeq Acc Id: XM_038567456   ⟹   XP_038423384
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02052,815,402 - 52,817,259 (-)NCBI
RefSeq Acc Id: XM_038631595   ⟹   XP_038487523
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02052,584,397 - 52,589,765 (-)NCBI
RefSeq Acc Id: XM_038631596   ⟹   XP_038487524
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02052,584,397 - 52,589,765 (-)NCBI
RefSeq Acc Id: XM_038631597   ⟹   XP_038487525
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02052,584,397 - 52,589,765 (-)NCBI
RefSeq Acc Id: XM_038631598   ⟹   XP_038487526
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02052,584,397 - 52,589,765 (-)NCBI
RefSeq Acc Id: XM_038631599   ⟹   XP_038487527
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02052,584,397 - 52,589,764 (-)NCBI
RefSeq Acc Id: XM_038631600   ⟹   XP_038487528
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02052,584,397 - 52,589,765 (-)NCBI
RefSeq Acc Id: XM_038631601   ⟹   XP_038487529
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02052,584,397 - 52,586,257 (-)NCBI
RefSeq Acc Id: XM_038631602   ⟹   XP_038487530
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02052,584,397 - 52,586,256 (-)NCBI
RefSeq Acc Id: XM_038631603   ⟹   XP_038487531
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02052,584,397 - 52,586,259 (-)NCBI
RefSeq Acc Id: XM_038631604   ⟹   XP_038487532
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02052,584,397 - 52,586,254 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005632992 (Get FASTA)   NCBI Sequence Viewer  
  XP_013977772 (Get FASTA)   NCBI Sequence Viewer  
  XP_022262809 (Get FASTA)   NCBI Sequence Viewer  
  XP_022262810 (Get FASTA)   NCBI Sequence Viewer  
  XP_022262811 (Get FASTA)   NCBI Sequence Viewer  
  XP_022262812 (Get FASTA)   NCBI Sequence Viewer  
  XP_038284698 (Get FASTA)   NCBI Sequence Viewer  
  XP_038284699 (Get FASTA)   NCBI Sequence Viewer  
  XP_038284700 (Get FASTA)   NCBI Sequence Viewer  
  XP_038284702 (Get FASTA)   NCBI Sequence Viewer  
  XP_038284703 (Get FASTA)   NCBI Sequence Viewer  
  XP_038284704 (Get FASTA)   NCBI Sequence Viewer  
  XP_038284705 (Get FASTA)   NCBI Sequence Viewer  
  XP_038311138 (Get FASTA)   NCBI Sequence Viewer  
  XP_038311139 (Get FASTA)   NCBI Sequence Viewer  
  XP_038311140 (Get FASTA)   NCBI Sequence Viewer  
  XP_038311141 (Get FASTA)   NCBI Sequence Viewer  
  XP_038360332 (Get FASTA)   NCBI Sequence Viewer  
  XP_038360333 (Get FASTA)   NCBI Sequence Viewer  
  XP_038360334 (Get FASTA)   NCBI Sequence Viewer  
  XP_038360335 (Get FASTA)   NCBI Sequence Viewer  
  XP_038360336 (Get FASTA)   NCBI Sequence Viewer  
  XP_038360337 (Get FASTA)   NCBI Sequence Viewer  
  XP_038360338 (Get FASTA)   NCBI Sequence Viewer  
  XP_038360339 (Get FASTA)   NCBI Sequence Viewer  
  XP_038360340 (Get FASTA)   NCBI Sequence Viewer  
  XP_038360341 (Get FASTA)   NCBI Sequence Viewer  
  XP_038423375 (Get FASTA)   NCBI Sequence Viewer  
  XP_038423376 (Get FASTA)   NCBI Sequence Viewer  
  XP_038423377 (Get FASTA)   NCBI Sequence Viewer  
  XP_038423378 (Get FASTA)   NCBI Sequence Viewer  
  XP_038423379 (Get FASTA)   NCBI Sequence Viewer  
  XP_038423380 (Get FASTA)   NCBI Sequence Viewer  
  XP_038423381 (Get FASTA)   NCBI Sequence Viewer  
  XP_038423382 (Get FASTA)   NCBI Sequence Viewer  
  XP_038423383 (Get FASTA)   NCBI Sequence Viewer  
  XP_038423384 (Get FASTA)   NCBI Sequence Viewer  
  XP_038487523 (Get FASTA)   NCBI Sequence Viewer  
  XP_038487524 (Get FASTA)   NCBI Sequence Viewer  
  XP_038487525 (Get FASTA)   NCBI Sequence Viewer  
  XP_038487526 (Get FASTA)   NCBI Sequence Viewer  
  XP_038487527 (Get FASTA)   NCBI Sequence Viewer  
  XP_038487528 (Get FASTA)   NCBI Sequence Viewer  
  XP_038487529 (Get FASTA)   NCBI Sequence Viewer  
  XP_038487530 (Get FASTA)   NCBI Sequence Viewer  
  XP_038487531 (Get FASTA)   NCBI Sequence Viewer  
  XP_038487532 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000027036.3
  ENSCAFP00000049807.1
  ENSCAFP00030040262.1
  ENSCAFP00030040275.1
  ENSCAFP00040031047.1
  ENSCAFP00040031073.1
  ENSCAFP00845038243
  ENSCAFP00845038243.1
  ENSCAFP00845038257
  ENSCAFP00845038257.1
RefSeq Acc Id: XP_013977772   ⟸   XM_014122297
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005632992   ⟸   XM_005632935
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PHC1 (UniProtKB/TrEMBL),   A0A8I3Q1P2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022262809   ⟸   XM_022407101
- Peptide Label: isoform X20
- Sequence:
RefSeq Acc Id: XP_022262812   ⟸   XM_022407104
- Peptide Label: isoform X23
- Sequence:
RefSeq Acc Id: XP_022262811   ⟸   XM_022407103
- Peptide Label: isoform X22
- Sequence:
RefSeq Acc Id: XP_022262810   ⟸   XM_022407102
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: ENSCAFP00000027036   ⟸   ENSCAFT00000029076
RefSeq Acc Id: ENSCAFP00000049807   ⟸   ENSCAFT00000081536
RefSeq Acc Id: XP_038360333   ⟸   XM_038504405
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038360335   ⟸   XM_038504407
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038360334   ⟸   XM_038504406
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038360332   ⟸   XM_038504404
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038360337   ⟸   XM_038504409
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038360336   ⟸   XM_038504408
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038360340   ⟸   XM_038504412
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038360338   ⟸   XM_038504410
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038360339   ⟸   XM_038504411
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038360341   ⟸   XM_038504413
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038487524   ⟸   XM_038631596
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038487526   ⟸   XM_038631598
- Peptide Label: isoform X14
RefSeq Acc Id: XP_038487525   ⟸   XM_038631597
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038487523   ⟸   XM_038631595
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038487528   ⟸   XM_038631600
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038487527   ⟸   XM_038631599
- Peptide Label: isoform X15
RefSeq Acc Id: XP_038487531   ⟸   XM_038631603
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038487529   ⟸   XM_038631601
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038487530   ⟸   XM_038631602
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038487532   ⟸   XM_038631604
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038284698   ⟸   XM_038428770
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038284700   ⟸   XM_038428772
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038284699   ⟸   XM_038428771
- Peptide Label: isoform X7
- UniProtKB: A0A8C0T5I4 (UniProtKB/TrEMBL),   A0A8I3PYB5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038284704   ⟸   XM_038428776
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038284702   ⟸   XM_038428774
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038284703   ⟸   XM_038428775
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038284705   ⟸   XM_038428777
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PHC1 (UniProtKB/TrEMBL),   A0A8I3Q1P2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038311138   ⟸   XM_038455210
- Peptide Label: isoform X20
RefSeq Acc Id: XP_038311139   ⟸   XM_038455211
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038311141   ⟸   XM_038455213
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038311140   ⟸   XM_038455212
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038423376   ⟸   XM_038567448
- Peptide Label: isoform X16
RefSeq Acc Id: XP_038423378   ⟸   XM_038567450
- Peptide Label: isoform X18
RefSeq Acc Id: XP_038423377   ⟸   XM_038567449
- Peptide Label: isoform X17
RefSeq Acc Id: XP_038423375   ⟸   XM_038567447
- Peptide Label: isoform X16
RefSeq Acc Id: XP_038423380   ⟸   XM_038567452
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038423379   ⟸   XM_038567451
- Peptide Label: isoform X19
RefSeq Acc Id: XP_038423383   ⟸   XM_038567455
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038423381   ⟸   XM_038567453
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038423382   ⟸   XM_038567454
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038423384   ⟸   XM_038567456
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PHC1 (UniProtKB/TrEMBL),   A0A8I3Q1P2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845038257   ⟸   ENSCAFT00845048762
RefSeq Acc Id: ENSCAFP00845038243   ⟸   ENSCAFT00845048742


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000018302 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030024991 UniProtKB/TrEMBL
  ENSCAFG00040019244 UniProtKB/TrEMBL
  ENSCAFG00845027633 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000029076.5 UniProtKB/TrEMBL
  ENSCAFT00000081536.2 UniProtKB/TrEMBL
  ENSCAFT00030046094.1 UniProtKB/TrEMBL
  ENSCAFT00030046105.1 UniProtKB/TrEMBL
  ENSCAFT00040035656.1 UniProtKB/TrEMBL
  ENSCAFT00040035684.1 UniProtKB/TrEMBL
  ENSCAFT00845048742 ENTREZGENE
  ENSCAFT00845048742.1 UniProtKB/TrEMBL
  ENSCAFT00845048762 ENTREZGENE
  ENSCAFT00845048762.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.10 UniProtKB/TrEMBL
InterPro GoLoco_motif UniProtKB/TrEMBL
  Pcp2 UniProtKB/TrEMBL
  TPR-like_helical_dom_sf UniProtKB/TrEMBL
KEGG Report cfa:484996 UniProtKB/TrEMBL
NCBI Gene PCP2 ENTREZGENE
PANTHER PTHR47503 UniProtKB/TrEMBL
  PURKINJE CELL PROTEIN 2 HOMOLOG UniProtKB/TrEMBL
Pfam GoLoco UniProtKB/TrEMBL
PROSITE GOLOCO UniProtKB/TrEMBL
SMART GoLoco UniProtKB/TrEMBL
UniProt A0A8C0PHC1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0T5I4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PYB5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3Q1P2 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:44318 ENTREZGENE