VIPR2 (vasoactive intestinal peptide receptor 2) - Rat Genome Database

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Gene: VIPR2 (vasoactive intestinal peptide receptor 2) Canis lupus familiaris
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Symbol: VIPR2
Name: vasoactive intestinal peptide receptor 2
RGD ID: 12191875
Description: ENCODES a protein that exhibits vasoactive intestinal polypeptide receptor activity (ortholog); INVOLVED IN activation of adenylate cyclase activity (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); colitis (ortholog); schizophrenia (ortholog); FOUND IN integral component of membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOW QUALITY PROTEIN: vasoactive intestinal polypeptide receptor 2; vasoactive intestinal polypeptide receptor 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11620,925,032 - 20,987,513 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1620,927,991 - 20,987,785 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1621,432,331 - 21,491,528 (-)NCBI
ROS_Cfam_1.01622,660,335 - 22,719,946 (-)NCBI
UMICH_Zoey_3.11621,028,013 - 21,087,077 (-)NCBI
UNSW_CanFamBas_1.01621,611,058 - 21,670,421 (-)NCBI
UU_Cfam_GSD_1.01621,665,914 - 21,725,151 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
VIPR2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11620,925,032 - 20,987,513 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1620,927,991 - 20,987,785 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1621,432,331 - 21,491,528 (-)NCBI
ROS_Cfam_1.01622,660,335 - 22,719,946 (-)NCBI
UMICH_Zoey_3.11621,028,013 - 21,087,077 (-)NCBI
UNSW_CanFamBas_1.01621,611,058 - 21,670,421 (-)NCBI
UU_Cfam_GSD_1.01621,665,914 - 21,725,151 (-)NCBI
VIPR2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl7159,028,175 - 159,144,867 (-)EnsemblGRCh38hg38GRCh38
GRCh387159,028,175 - 159,144,957 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh377158,820,866 - 158,937,559 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 367158,513,627 - 158,630,410 (-)NCBINCBI36hg18NCBI36
Build 347158,320,342 - 158,437,125NCBI
Celera7153,254,268 - 153,370,389 (-)NCBI
Cytogenetic Map7q36.3NCBI
HuRef7152,560,564 - 152,677,411 (-)NCBIHuRef
CHM1_17158,828,828 - 158,945,965 (-)NCBICHM1_1
CRA_TCAGchr7v27158,024,240 - 158,139,944 (-)NCBI
Vipr2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3912116,041,040 - 116,117,842 (+)NCBIGRCm39mm39
GRCm39 Ensembl12116,041,346 - 116,109,881 (+)Ensembl
GRCm3812116,077,420 - 116,148,637 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl12116,077,726 - 116,146,261 (+)EnsemblGRCm38mm10GRCm38
MGSCv3712117,316,196 - 117,384,734 (+)NCBIGRCm37mm9NCBIm37
MGSCv3612116,519,807 - 116,587,384 (+)NCBImm8
MGSCv3612110,280,083 - 110,347,578 (+)NCBImm8
Cytogenetic Map12F2NCBI
cM Map1262.59NCBI
Vipr2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.26136,996,664 - 137,070,599 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl6137,001,511 - 137,070,597 (+)Ensembl
Rnor_6.06143,932,960 - 144,009,476 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6143,938,040 - 144,008,072 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06152,871,204 - 152,945,276 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46143,347,748 - 143,416,680 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16143,353,934 - 143,422,867 (+)NCBI
Celera6134,667,982 - 134,736,986 (+)NCBICelera
Cytogenetic Map6q33NCBI
Vipr2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555791,160,620 - 1,209,848 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555791,160,620 - 1,212,711 (-)NCBIChiLan1.0ChiLan1.0
VIPR2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.17162,306,477 - 162,425,860 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7162,306,477 - 162,422,788 (-)Ensemblpanpan1.1panPan2
Vipr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118328,956 - 410,359 (+)NCBI
SpeTri2.0NW_004936856859,009 - 866,239 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
VIPR2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl18396,263 - 518,102 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.118396,379 - 466,408 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.218663,352 - 732,192 (+)NCBISscrofa10.2Sscrofa10.2susScr3
VIPR2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121126,917,862 - 127,022,834 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl21126,917,880 - 127,022,758 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607223,466,663 - 23,573,079 (-)NCBIVero_WHO_p1.0
Vipr2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624800125,732 - 188,200 (+)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 4
Low 5 5 20 4 6 4 3 12 6 3
Below cutoff 2 2 2 6 3 8 3

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022403935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022403936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022403937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038559854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038623876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038623877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038623878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038689641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038689642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_849361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002614602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000008482   ⟹   ENSCAFP00000007863
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1620,927,991 - 20,987,785 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000066614   ⟹   ENSCAFP00000057970
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1620,928,387 - 20,965,549 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000070561   ⟹   ENSCAFP00000056959
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1620,927,991 - 20,984,771 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000081166   ⟹   ENSCAFP00000054391
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1620,941,197 - 20,987,785 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000083690   ⟹   ENSCAFP00000043518
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1620,938,790 - 20,987,785 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000089773   ⟹   ENSCAFP00000064486
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1620,928,387 - 20,984,816 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000091192   ⟹   ENSCAFP00000048527
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1620,928,387 - 20,984,816 (-)Ensembl
RefSeq Acc Id: XM_022403936   ⟹   XP_022259644
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11620,925,032 - 20,984,750 (-)NCBI
Dog10K_Boxer_Tasha1621,432,331 - 21,488,876 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038497427   ⟹   XP_038353355
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11621,028,013 - 21,087,077 (-)NCBI
RefSeq Acc Id: XM_038559854   ⟹   XP_038415782
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01621,665,914 - 21,725,151 (-)NCBI
RefSeq Acc Id: XM_038623876   ⟹   XP_038479804
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01621,611,058 - 21,670,421 (-)NCBI
RefSeq Acc Id: XM_038623877   ⟹   XP_038479805
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01621,611,058 - 21,667,745 (-)NCBI
RefSeq Acc Id: XM_038623878   ⟹   XP_038479806
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01621,611,058 - 21,670,421 (-)NCBI
RefSeq Acc Id: XM_038689641   ⟹   XP_038545569
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01622,660,335 - 22,719,946 (-)NCBI
RefSeq Acc Id: XM_038689642   ⟹   XP_038545570
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01622,660,335 - 22,717,274 (-)NCBI
RefSeq Acc Id: XM_849361   ⟹   XP_854454
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11620,925,032 - 20,987,512 (-)NCBI
Dog10K_Boxer_Tasha1621,432,331 - 21,491,528 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_854454   ⟸   XM_849361
- Peptide Label: isoform X1
- UniProtKB: F1P7Q6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022259644   ⟸   XM_022403936
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSCAFP00000056959   ⟸   ENSCAFT00000070561
RefSeq Acc Id: ENSCAFP00000043518   ⟸   ENSCAFT00000083690
RefSeq Acc Id: ENSCAFP00000057970   ⟸   ENSCAFT00000066614
RefSeq Acc Id: ENSCAFP00000007863   ⟸   ENSCAFT00000008482
RefSeq Acc Id: ENSCAFP00000064486   ⟸   ENSCAFT00000089773
RefSeq Acc Id: ENSCAFP00000054391   ⟸   ENSCAFT00000081166
RefSeq Acc Id: ENSCAFP00000048527   ⟸   ENSCAFT00000091192
RefSeq Acc Id: XP_038353355   ⟸   XM_038497427
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038479806   ⟸   XM_038623878
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038479804   ⟸   XM_038623876
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038479805   ⟸   XM_038623877
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038545569   ⟸   XM_038689641
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038545570   ⟸   XM_038689642
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038415782   ⟸   XM_038559854
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000005255 Ensembl
NCBI Gene VIPR2 ENTREZGENE
UniProt F1P7Q6 ENTREZGENE
VGNC ID VGNC:48266 ENTREZGENE