TOP3B (DNA topoisomerase III beta) - Rat Genome Database

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Gene: TOP3B (DNA topoisomerase III beta) Canis lupus familiaris
Analyze
Symbol: TOP3B
Name: DNA topoisomerase III beta
RGD ID: 12189258
Description: ENCODES a protein that exhibits DNA binding (inferred); DNA topoisomerase activity (inferred); DNA topoisomerase type I (single strand cut, ATP-independent) activity (inferred); INVOLVED IN chromosome segregation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); chromosome 22q11.2 deletion syndrome, distal (ortholog); DiGeorge syndrome (ortholog); FOUND IN condensed chromosome (ortholog); DNA topoisomerase III-beta-TDRD3 complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: DNA topoisomerase 3-beta-1; topoisomerase (DNA) III beta
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12631,198,371 - 31,223,133 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2631,198,382 - 31,215,134 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2631,154,388 - 31,178,817 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02632,604,302 - 32,628,806 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2632,604,310 - 32,628,701 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12630,652,585 - 30,677,122 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02630,276,606 - 30,301,211 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02631,367,160 - 31,391,836 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
TOP3B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12631,198,371 - 31,223,133 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2631,198,382 - 31,215,134 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2631,154,388 - 31,178,817 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02632,604,302 - 32,628,806 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2632,604,310 - 32,628,701 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12630,652,585 - 30,677,122 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02630,276,606 - 30,301,211 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02631,367,160 - 31,391,836 (-)NCBIUU_Cfam_GSD_1.0
TOP3B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382221,957,025 - 21,982,787 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2221,957,025 - 21,982,813 (-)EnsemblGRCh38hg38GRCh38
GRCh372222,311,397 - 22,337,184 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362220,641,403 - 20,667,147 (-)NCBINCBI36Build 36hg18NCBI36
Build 342220,635,957 - 20,661,701NCBI
Celera226,128,944 - 6,154,663 (-)NCBICelera
Cytogenetic Map22q11.22NCBI
HuRef225,268,479 - 5,294,196 (-)NCBIHuRef
CHM1_12222,311,501 - 22,337,220 (-)NCBICHM1_1
T2T-CHM13v2.02222,370,556 - 22,396,320 (-)NCBIT2T-CHM13v2.0
Top3b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391616,688,587 - 16,710,850 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1616,688,600 - 16,710,854 (+)EnsemblGRCm39 Ensembl
GRCm381616,870,722 - 16,892,986 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1616,870,736 - 16,892,990 (+)EnsemblGRCm38mm10GRCm38
MGSCv371616,870,984 - 16,893,079 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361616,784,454 - 16,806,549 (+)NCBIMGSCv36mm8
Celera1617,442,801 - 17,464,977 (+)NCBICelera
Cytogenetic Map16A3NCBI
cM Map1610.46NCBI
Top3b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81197,601,223 - 97,629,678 (-)NCBIGRCr8
mRatBN7.21184,097,018 - 84,125,474 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1184,097,026 - 84,125,392 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1192,821,137 - 92,849,383 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01185,482,270 - 85,510,510 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01184,535,862 - 84,564,108 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01188,346,305 - 88,374,896 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1188,346,313 - 88,374,679 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01191,401,389 - 91,429,964 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41186,116,936 - 86,145,314 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11186,157,538 - 86,185,850 (-)NCBI
Celera1182,851,647 - 82,880,025 (-)NCBICelera
Cytogenetic Map11q23NCBI
Top3b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544217,200,453 - 17,225,335 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544217,201,079 - 17,223,824 (+)NCBIChiLan1.0ChiLan1.0
TOP3B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22331,498,751 - 31,524,557 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12234,047,630 - 34,073,423 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0224,076,295 - 4,102,086 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12220,557,248 - 20,583,307 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2220,557,248 - 20,583,464 (-)Ensemblpanpan1.1panPan2
Top3b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118140,971,807 - 140,997,296 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366191,756,791 - 1,785,953 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366191,756,829 - 1,782,063 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TOP3B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1450,020,509 - 50,037,856 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11450,020,412 - 50,037,854 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21453,462,935 - 53,480,381 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TOP3B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1194,137,823 - 4,163,860 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl194,137,862 - 4,166,436 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660852,836,805 - 2,865,520 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Top3b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247471,446,412 - 1,473,600 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247471,450,236 - 1,473,467 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TOP3B
488 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 3 5 18 2 2 2 6 6 12 8 10 6
Low 2 4 4 4 4
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005636633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005636634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014108221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038437647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038459151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038512510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038512511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038512512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038512513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038512514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038576004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038576005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038576006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038576007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038576008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038640218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_534771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000024557   ⟹   ENSCAFP00000022795
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2631,198,382 - 31,215,134 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000071362   ⟹   ENSCAFP00000063550
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2631,198,382 - 31,215,134 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845046997   ⟹   ENSCAFP00845036878
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2632,604,310 - 32,628,701 (-)Ensembl
RefSeq Acc Id: XM_005636633   ⟹   XP_005636690
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12631,198,371 - 31,222,885 (-)NCBI
Dog10K_Boxer_Tasha2631,154,388 - 31,178,555 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005636634   ⟹   XP_005636691
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12631,198,371 - 31,222,887 (-)NCBI
Dog10K_Boxer_Tasha2631,154,388 - 31,178,556 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014108221   ⟹   XP_013963696
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12631,198,461 - 31,213,836 (-)NCBI
Dog10K_Boxer_Tasha2631,154,478 - 31,169,498 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038437643   ⟹   XP_038293571
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02632,604,392 - 32,628,760 (-)NCBI
RefSeq Acc Id: XM_038437644   ⟹   XP_038293572
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02632,604,392 - 32,628,806 (-)NCBI
RefSeq Acc Id: XM_038437645   ⟹   XP_038293573
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02632,604,302 - 32,628,544 (-)NCBI
RefSeq Acc Id: XM_038437646   ⟹   XP_038293574
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02632,604,302 - 32,628,546 (-)NCBI
RefSeq Acc Id: XM_038437647   ⟹   XP_038293575
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02632,604,392 - 32,619,509 (-)NCBI
RefSeq Acc Id: XM_038459151   ⟹   XP_038315079
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2631,154,478 - 31,178,771 (-)NCBI
RefSeq Acc Id: XM_038512510   ⟹   XP_038368438
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12630,652,675 - 30,677,076 (-)NCBI
RefSeq Acc Id: XM_038512511   ⟹   XP_038368439
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12630,652,675 - 30,677,122 (-)NCBI
RefSeq Acc Id: XM_038512512   ⟹   XP_038368440
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12630,652,585 - 30,676,860 (-)NCBI
RefSeq Acc Id: XM_038512513   ⟹   XP_038368441
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12630,652,585 - 30,676,861 (-)NCBI
RefSeq Acc Id: XM_038512514   ⟹   XP_038368442
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12630,652,675 - 30,667,803 (-)NCBI
RefSeq Acc Id: XM_038576004   ⟹   XP_038431932
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02631,367,250 - 31,391,790 (-)NCBI
RefSeq Acc Id: XM_038576005   ⟹   XP_038431933
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02631,367,250 - 31,391,836 (-)NCBI
RefSeq Acc Id: XM_038576006   ⟹   XP_038431934
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02631,367,160 - 31,391,573 (-)NCBI
RefSeq Acc Id: XM_038576007   ⟹   XP_038431935
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02631,367,160 - 31,391,575 (-)NCBI
RefSeq Acc Id: XM_038576008   ⟹   XP_038431936
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02631,367,250 - 31,382,316 (-)NCBI
RefSeq Acc Id: XM_038640214   ⟹   XP_038496142
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02630,276,696 - 30,301,165 (-)NCBI
RefSeq Acc Id: XM_038640215   ⟹   XP_038496143
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02630,276,696 - 30,301,211 (-)NCBI
RefSeq Acc Id: XM_038640216   ⟹   XP_038496144
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02630,276,606 - 30,300,948 (-)NCBI
RefSeq Acc Id: XM_038640217   ⟹   XP_038496145
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02630,276,606 - 30,300,950 (-)NCBI
RefSeq Acc Id: XM_038640218   ⟹   XP_038496146
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02630,276,696 - 30,291,713 (-)NCBI
RefSeq Acc Id: XM_534771   ⟹   XP_534771
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12631,198,461 - 31,223,133 (-)NCBI
Dog10K_Boxer_Tasha2631,154,478 - 31,178,817 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005636690 (Get FASTA)   NCBI Sequence Viewer  
  XP_005636691 (Get FASTA)   NCBI Sequence Viewer  
  XP_013963696 (Get FASTA)   NCBI Sequence Viewer  
  XP_038293571 (Get FASTA)   NCBI Sequence Viewer  
  XP_038293572 (Get FASTA)   NCBI Sequence Viewer  
  XP_038293573 (Get FASTA)   NCBI Sequence Viewer  
  XP_038293574 (Get FASTA)   NCBI Sequence Viewer  
  XP_038293575 (Get FASTA)   NCBI Sequence Viewer  
  XP_038315079 (Get FASTA)   NCBI Sequence Viewer  
  XP_038368438 (Get FASTA)   NCBI Sequence Viewer  
  XP_038368439 (Get FASTA)   NCBI Sequence Viewer  
  XP_038368440 (Get FASTA)   NCBI Sequence Viewer  
  XP_038368441 (Get FASTA)   NCBI Sequence Viewer  
  XP_038368442 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431932 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431933 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431934 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431935 (Get FASTA)   NCBI Sequence Viewer  
  XP_038431936 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496142 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496143 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496144 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496145 (Get FASTA)   NCBI Sequence Viewer  
  XP_038496146 (Get FASTA)   NCBI Sequence Viewer  
  XP_534771 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000022795.3
  ENSCAFP00030041239.1
  ENSCAFP00040036425.1
  ENSCAFP00040036472.1
  ENSCAFP00845036878
  ENSCAFP00845036878.1
RefSeq Acc Id: XP_534771   ⟸   XM_534771
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KQJ5 (UniProtKB/TrEMBL),   A0A8C0TLE8 (UniProtKB/TrEMBL),   A0A8I3PSZ4 (UniProtKB/TrEMBL),   A0A8C0TFI5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005636691   ⟸   XM_005636634
- Peptide Label: isoform X2
- UniProtKB: A0A8C0TFI5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005636690   ⟸   XM_005636633
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KQJ5 (UniProtKB/TrEMBL),   A0A8C0TLE8 (UniProtKB/TrEMBL),   A0A8I3PSZ4 (UniProtKB/TrEMBL),   A0A8C0TFI5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013963696   ⟸   XM_014108221
- Peptide Label: isoform X3
- UniProtKB: A0A8C0TFI5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000022795   ⟸   ENSCAFT00000024557
RefSeq Acc Id: ENSCAFP00000063550   ⟸   ENSCAFT00000071362
RefSeq Acc Id: XP_038368441   ⟸   XM_038512513
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038368440   ⟸   XM_038512512
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038368439   ⟸   XM_038512511
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038368438   ⟸   XM_038512510
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038368442   ⟸   XM_038512514
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038496145   ⟸   XM_038640217
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038496144   ⟸   XM_038640216
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038496143   ⟸   XM_038640215
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038496142   ⟸   XM_038640214
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038496146   ⟸   XM_038640218
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038293574   ⟸   XM_038437646
- Peptide Label: isoform X2
- UniProtKB: A0A8C0TFI5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038293573   ⟸   XM_038437645
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KQJ5 (UniProtKB/TrEMBL),   A0A8C0TLE8 (UniProtKB/TrEMBL),   A0A8I3PSZ4 (UniProtKB/TrEMBL),   A0A8C0TFI5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038293572   ⟸   XM_038437644
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KQJ5 (UniProtKB/TrEMBL),   A0A8C0TLE8 (UniProtKB/TrEMBL),   A0A8I3PSZ4 (UniProtKB/TrEMBL),   A0A8C0TFI5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038293571   ⟸   XM_038437643
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KQJ5 (UniProtKB/TrEMBL),   A0A8C0TLE8 (UniProtKB/TrEMBL),   A0A8I3PSZ4 (UniProtKB/TrEMBL),   A0A8C0TFI5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038293575   ⟸   XM_038437647
- Peptide Label: isoform X3
- UniProtKB: A0A8C0TFI5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038315079   ⟸   XM_038459151
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KQJ5 (UniProtKB/TrEMBL),   A0A8C0TLE8 (UniProtKB/TrEMBL),   A0A8I3PSZ4 (UniProtKB/TrEMBL),   A0A8C0TFI5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431935   ⟸   XM_038576007
- Peptide Label: isoform X2
- UniProtKB: A0A8C0TFI5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431934   ⟸   XM_038576006
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KQJ5 (UniProtKB/TrEMBL),   A0A8C0TFI5 (UniProtKB/TrEMBL),   A0A8C0TLE8 (UniProtKB/TrEMBL),   A0A8I3PSZ4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431933   ⟸   XM_038576005
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KQJ5 (UniProtKB/TrEMBL),   A0A8C0TFI5 (UniProtKB/TrEMBL),   A0A8C0TLE8 (UniProtKB/TrEMBL),   A0A8I3PSZ4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431932   ⟸   XM_038576004
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KQJ5 (UniProtKB/TrEMBL),   A0A8C0TFI5 (UniProtKB/TrEMBL),   A0A8C0TLE8 (UniProtKB/TrEMBL),   A0A8I3PSZ4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038431936   ⟸   XM_038576008
- Peptide Label: isoform X3
- UniProtKB: A0A8C0TFI5 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845036878   ⟸   ENSCAFT00845046997
Protein Domains
Toprim


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000015482 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030025517 UniProtKB/TrEMBL
  ENSCAFG00040022493 UniProtKB/TrEMBL
  ENSCAFG00845026653 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000024557.5 UniProtKB/TrEMBL
  ENSCAFT00030047169.1 UniProtKB/TrEMBL
  ENSCAFT00040041755.1 UniProtKB/TrEMBL
  ENSCAFT00040041806.1 UniProtKB/TrEMBL
  ENSCAFT00845046997 ENTREZGENE
  ENSCAFT00845046997.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.290.10 UniProtKB/TrEMBL
  1.10.460.10 UniProtKB/TrEMBL
  2.70.20.10 UniProtKB/TrEMBL
  3.40.50.140 UniProtKB/TrEMBL
InterPro Topo_IA UniProtKB/TrEMBL
  Topo_IA_2 UniProtKB/TrEMBL
  Topo_IA_AS UniProtKB/TrEMBL
  Topo_IA_cen UniProtKB/TrEMBL
  Topo_IA_cen_sub1 UniProtKB/TrEMBL
  Topo_IA_cen_sub2 UniProtKB/TrEMBL
  Topo_IA_cen_sub3 UniProtKB/TrEMBL
  Topo_IA_core_domain UniProtKB/TrEMBL
  Topo_IA_DNA-bd_dom UniProtKB/TrEMBL
  TOPRIM_domain UniProtKB/TrEMBL
  TOPRIM_TopoIII UniProtKB/TrEMBL
KEGG Report cfa:477576 UniProtKB/TrEMBL
NCBI Gene TOP3B ENTREZGENE
PANTHER DNA TOPOISOMERASE 3-BETA-1 UniProtKB/TrEMBL
  PTHR11390 UniProtKB/TrEMBL
Pfam Topoisom_bac UniProtKB/TrEMBL
  Toprim UniProtKB/TrEMBL
PRINTS PRTPISMRASEI UniProtKB/TrEMBL
PROSITE TOPOISOMERASE_I_PROK UniProtKB/TrEMBL
  TOPRIM UniProtKB/TrEMBL
SMART TOP1Ac UniProtKB/TrEMBL
  TOP1Bc UniProtKB/TrEMBL
  TOPRIM UniProtKB/TrEMBL
Superfamily-SCOP SSF56712 UniProtKB/TrEMBL
UniProt A0A8C0KQJ5 ENTREZGENE
  A0A8C0TFI5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TLE8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PSZ4 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:49634 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-08-08 TOP3B  DNA topoisomerase III beta    topoisomerase (DNA) III beta  Symbol and/or name change 5135510 APPROVED