HAUS7 (HAUS augmin like complex subunit 7) - Rat Genome Database

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Gene: HAUS7 (HAUS augmin like complex subunit 7) Canis lupus familiaris
Analyze
Symbol: HAUS7
Name: HAUS augmin like complex subunit 7
RGD ID: 12189038
Description: ENCODES a protein that exhibits thioesterase binding (ortholog); INVOLVED IN centrosome cycle (inferred); spindle assembly (inferred); ASSOCIATED WITH adrenoleukodystrophy (ortholog); autistic disorder (ortholog); Barth syndrome (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: HAUS augmin-like complex subunit 7; UCHL5 interacting protein; UCHL5IP
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X121,264,824 - 121,296,712 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX121,266,584 - 121,297,076 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX106,597,285 - 106,627,487 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X123,524,855 - 123,550,859 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1X120,178,899 - 120,209,102 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X122,694,013 - 122,724,221 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X122,456,069 - 122,486,247 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
HAUS7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X121,264,824 - 121,296,712 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX121,266,584 - 121,297,076 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX106,597,285 - 106,627,487 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X123,524,855 - 123,550,859 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1X120,178,899 - 120,209,102 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X122,694,013 - 122,724,221 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X122,456,069 - 122,486,247 (-)NCBIUU_Cfam_GSD_1.0
HAUS7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X153,447,668 - 153,495,465 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX153,447,668 - 153,495,516 (-)EnsemblGRCh38hg38GRCh38
GRCh37X152,713,126 - 152,760,923 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X152,366,318 - 152,389,283 (-)NCBINCBI36Build 36hg18NCBI36
CeleraX152,946,833 - 152,970,312 (-)NCBICelera
Cytogenetic MapXq28NCBI
HuRefX141,372,261 - 141,419,460 (-)NCBIHuRef
CHM1_1X152,587,548 - 152,635,492 (-)NCBICHM1_1
T2T-CHM13v2.0X151,721,251 - 151,769,038 (-)NCBIT2T-CHM13v2.0
Haus7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X72,480,921 - 72,502,635 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX72,480,921 - 72,502,650 (-)EnsemblGRCm39 Ensembl
GRCm38X73,437,315 - 73,459,029 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX73,437,315 - 73,459,044 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X70,682,654 - 70,704,368 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X69,690,035 - 69,711,749 (-)NCBIMGSCv36mm8
CeleraX64,691,155 - 64,712,939 (-)NCBICelera
Cytogenetic MapXA7.3NCBI
cM MapX37.32NCBI
Haus7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X156,306,320 - 156,331,940 (-)NCBIGRCr8
mRatBN7.2X151,154,979 - 151,174,441 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX151,154,979 - 151,180,577 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX153,296,141 - 153,315,224 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X156,859,352 - 156,878,435 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X154,531,185 - 154,550,268 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X157,347,222 - 157,372,796 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX157,353,577 - 157,372,809 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01153,095,311 - 153,120,880 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X159,337,591 - 159,356,655 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1136,715,537 - 136,734,620 (+)NCBICelera
Cytogenetic MapXq37NCBI
Haus7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955580210,820 - 230,734 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955580210,799 - 230,450 (-)NCBIChiLan1.0ChiLan1.0
HAUS7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X153,484,903 - 153,524,280 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X153,488,507 - 153,514,688 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X142,998,240 - 143,032,602 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X152,884,656 - 152,907,620 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX152,881,714 - 152,907,620 (-)Ensemblpanpan1.1panPan2
Haus7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X118,584,145 - 118,612,356 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936809321,497 - 350,110 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936809321,906 - 350,105 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HAUS7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX124,234,736 - 124,258,098 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X124,234,735 - 124,258,133 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X141,801,317 - 141,821,536 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HAUS7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X127,882,121 - 127,930,089 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX127,878,900 - 127,902,344 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606565,743,859 - 65,788,401 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Haus7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624946190,127 - 210,497 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624946190,065 - 210,003 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in HAUS7
223 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 3 1
Low 5 3 16 3 6 3 5 12 8 10 6
Below cutoff 2 3 3 3 6

Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00000030456   ⟹   ENSCAFP00000028296
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX121,266,584 - 121,297,076 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000090304   ⟹   ENSCAFP00000054383
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX121,271,679 - 121,297,076 (-)Ensembl
RefSeq Acc Id: XM_005641990   ⟹   XP_005642047
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X121,264,824 - 121,296,712 (-)NCBI
Dog10K_Boxer_TashaX106,597,285 - 106,627,487 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038451197   ⟹   XP_038307125
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X123,524,855 - 123,550,859 (+)NCBI
RefSeq Acc Id: XM_038524676   ⟹   XP_038380604
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X120,178,899 - 120,209,102 (-)NCBI
RefSeq Acc Id: XM_038588641   ⟹   XP_038444569
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X122,456,069 - 122,486,247 (-)NCBI
RefSeq Acc Id: XM_038653162   ⟹   XP_038509090
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X122,694,013 - 122,724,221 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_005642047   ⟸   XM_005641990
- Peptide Label: isoform X5
- UniProtKB: A0A8C0LF22 (UniProtKB/TrEMBL),   A0A8C0SYK5 (UniProtKB/TrEMBL),   A0A8P0SN73 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000028296   ⟸   ENSCAFT00000030456
RefSeq Acc Id: ENSCAFP00000054383   ⟸   ENSCAFT00000090304
RefSeq Acc Id: XP_038380604   ⟸   XM_038524676
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038509090   ⟸   XM_038653162
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038307125   ⟸   XM_038451197
- Peptide Label: isoform X1
- UniProtKB: A0A8I3PBB7 (UniProtKB/TrEMBL),   A0A8C0SYK5 (UniProtKB/TrEMBL),   A0A8P0SN73 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038444569   ⟸   XM_038588641
- Peptide Label: isoform X4
- UniProtKB: A0A8C0SYK5 (UniProtKB/TrEMBL),   A0A8P0SN73 (UniProtKB/TrEMBL)

Promoters
RGD ID:13689459
Promoter ID:EPDNEW_C7526
Type:initiation region
Name:HAUS7_1
Description:HAUS augmin like complex subunit 7
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X121,296,725 - 121,296,785EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000019186 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040016802 UniProtKB/TrEMBL
  ENSCAFG00845022483 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000030456.5 UniProtKB/TrEMBL
  ENSCAFT00040031019.1 UniProtKB/TrEMBL
  ENSCAFT00845039699 ENTREZGENE
  ENSCAFT00845039699.1 UniProtKB/TrEMBL
InterPro Haus7-like UniProtKB/TrEMBL
NCBI Gene HAUS7 ENTREZGENE
PANTHER HAUS AUGMIN-LIKE COMPLEX SUBUNIT 7 UniProtKB/TrEMBL
  PTHR14352 UniProtKB/TrEMBL
UniProt A0A8C0LF22 ENTREZGENE
  A0A8C0SYK5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PBB7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SN73 ENTREZGENE
UniProt Secondary A0A8P0SN73 UniProtKB/TrEMBL
VGNC ID VGNC:41607 ENTREZGENE