CNR1 (cannabinoid receptor 1) - Rat Genome Database

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Pathways
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Gene: CNR1 (cannabinoid receptor 1) Canis lupus familiaris
Analyze
Symbol: CNR1
Name: cannabinoid receptor 1
RGD ID: 12185817
Description: ENCODES a protein that exhibits cannabinoid receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); axonal fasciculation (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH Alcohol Withdrawal Delirium (ortholog); Animal Disease Models (ortholog); anxiety disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: CB1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11247,537,240 - 47,560,723 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1247,509,583 - 47,560,983 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1247,344,588 - 47,368,064 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01248,342,012 - 48,365,459 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11247,639,694 - 47,663,171 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01247,561,070 - 47,584,546 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01247,752,753 - 47,776,234 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
adenylate cyclase-modulating G protein-coupled receptor signaling pathway  (ISO)
axonal fasciculation  (ISO)
cannabinoid signaling pathway  (IEA)
G protein-coupled receptor signaling pathway  (IEA,ISO)
glucose homeostasis  (ISO)
learning or memory  (ISO)
maternal process involved in female pregnancy  (ISO)
memory  (ISO)
negative regulation of action potential  (ISO)
negative regulation of blood pressure  (ISO)
negative regulation of dopamine secretion  (ISO)
negative regulation of fatty acid beta-oxidation  (ISO)
negative regulation of mast cell activation  (ISO)
negative regulation of monoatomic ion transport  (ISO)
negative regulation of nitric-oxide synthase activity  (ISO)
negative regulation of serotonin secretion  (ISO)
positive regulation of acute inflammatory response to antigenic stimulus  (ISO)
positive regulation of apoptotic process  (ISO)
positive regulation of blood pressure  (ISO)
positive regulation of fever generation  (ISO)
positive regulation of neuron projection development  (ISO)
regulation of feeding behavior  (ISO)
regulation of insulin secretion  (ISO)
regulation of lipid metabolic process  (ISO)
regulation of penile erection  (ISO)
regulation of presynaptic cytosolic calcium ion concentration  (ISO)
regulation of synaptic transmission, GABAergic  (ISO)
regulation of synaptic transmission, glutamatergic  (ISO)
response to cocaine  (ISO)
response to ethanol  (ISO)
response to lipopolysaccharide  (ISO)
response to nicotine  (ISO)
response to nutrient  (ISO)
retrograde trans-synaptic signaling by endocannabinoid  (ISO)
signal transduction  (IEA)
spermatogenesis  (ISO)
trans-synaptic signaling by endocannabinoid, modulating synaptic transmission  (ISO)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:11214319   PMID:20437096   PMID:21414652  


Genomics

Comparative Map Data
CNR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11247,537,240 - 47,560,723 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1247,509,583 - 47,560,983 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1247,344,588 - 47,368,064 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01248,342,012 - 48,365,459 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11247,639,694 - 47,663,171 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01247,561,070 - 47,584,546 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01247,752,753 - 47,776,234 (-)NCBIUU_Cfam_GSD_1.0
CNR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38688,139,864 - 88,167,349 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl688,139,864 - 88,166,347 (-)EnsemblGRCh38hg38GRCh38
GRCh37688,849,583 - 88,877,068 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36688,906,302 - 88,911,775 (-)NCBINCBI36Build 36hg18NCBI36
Build 34688,906,301 - 88,911,775NCBI
Celera689,267,475 - 89,293,659 (-)NCBICelera
Cytogenetic Map6q15NCBI
HuRef686,064,928 - 86,090,983 (-)NCBIHuRef
CHM1_1688,947,341 - 88,973,526 (-)NCBICHM1_1
T2T-CHM13v2.0689,348,358 - 89,375,841 (-)NCBIT2T-CHM13v2.0
Cnr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39433,923,171 - 33,948,831 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl433,924,593 - 33,948,831 (+)EnsemblGRCm39 Ensembl
GRCm38433,923,171 - 33,948,831 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl433,924,593 - 33,948,831 (+)EnsemblGRCm38mm10GRCm38
MGSCv37434,011,607 - 34,035,806 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36434,253,245 - 34,277,444 (+)NCBIMGSCv36mm8
Celera433,679,304 - 33,703,476 (+)NCBICelera
Cytogenetic Map4A5NCBI
cM Map416.28NCBI
Cnr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2548,408,543 - 48,436,099 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl548,408,574 - 48,435,099 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx550,575,033 - 50,597,155 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0552,174,251 - 52,196,375 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0552,110,881 - 52,132,920 (+)NCBIRnor_WKY
Rnor_6.0549,307,584 - 49,333,064 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl549,311,030 - 49,333,056 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0553,878,619 - 53,904,013 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4550,427,173 - 50,445,471 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1550,427,351 - 50,445,650 (+)NCBI
Celera547,168,709 - 47,190,724 (+)NCBICelera
Cytogenetic Map5q21NCBI
Cnr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541115,052,163 - 15,077,320 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541115,052,151 - 15,077,320 (-)NCBIChiLan1.0ChiLan1.0
CNR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan16106,115,872 - 106,143,699 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0686,017,141 - 86,044,889 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1689,289,102 - 89,315,174 (-)NCBIpanpan1.1PanPan1.1panPan2
Cnr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494682,664,248 - 82,691,073 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365103,781,210 - 3,802,693 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049365103,779,930 - 3,806,615 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CNR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl156,467,835 - 56,492,602 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1156,466,022 - 56,493,275 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2163,201,796 - 63,224,939 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CNR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11312,626,259 - 12,653,253 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1312,630,270 - 12,631,688 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040188,875,655 - 188,902,692 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cnr1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247996,101,728 - 6,126,520 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247996,100,709 - 6,126,530 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CNR1
192 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 6
Low 6 5 6 8
Below cutoff 5 5 15 5 1 5 6 4 10 6

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005627618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005627619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005627620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038492408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038492409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038492410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038492411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038492412 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038492413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554702 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554704 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038554707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038618578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682159 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038684136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY011618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000004948   ⟹   ENSCAFP00000004587
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1247,509,583 - 47,560,983 (-)Ensembl
RefSeq Acc Id: XM_005627618   ⟹   XP_005627675
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11247,537,240 - 47,560,723 (-)NCBI
Dog10K_Boxer_Tasha1247,344,588 - 47,368,063 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005627619   ⟹   XP_005627676
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11247,537,240 - 47,560,723 (-)NCBI
Dog10K_Boxer_Tasha1247,344,588 - 47,368,063 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005627620   ⟹   XP_005627677
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11247,537,240 - 47,555,404 (-)NCBI
Dog10K_Boxer_Tasha1247,344,588 - 47,359,496 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038492408   ⟹   XP_038348336
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11247,639,694 - 47,663,170 (-)NCBI
RefSeq Acc Id: XM_038492409   ⟹   XP_038348337
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11247,639,694 - 47,663,170 (-)NCBI
RefSeq Acc Id: XM_038492410   ⟹   XP_038348338
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11247,639,694 - 47,654,604 (-)NCBI
RefSeq Acc Id: XM_038492411   ⟹   XP_038348339
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11247,639,694 - 47,663,170 (-)NCBI
RefSeq Acc Id: XM_038492412   ⟹   XP_038348340
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11247,639,694 - 47,663,171 (-)NCBI
RefSeq Acc Id: XM_038492413   ⟹   XP_038348341
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11247,639,694 - 47,654,607 (-)NCBI
RefSeq Acc Id: XM_038554702   ⟹   XP_038410630
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01247,752,753 - 47,776,233 (-)NCBI
RefSeq Acc Id: XM_038554703   ⟹   XP_038410631
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01247,752,753 - 47,776,233 (-)NCBI
RefSeq Acc Id: XM_038554704   ⟹   XP_038410632
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01247,752,753 - 47,767,664 (-)NCBI
RefSeq Acc Id: XM_038554705   ⟹   XP_038410633
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01247,752,753 - 47,776,233 (-)NCBI
RefSeq Acc Id: XM_038554706   ⟹   XP_038410634
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01247,752,753 - 47,776,234 (-)NCBI
RefSeq Acc Id: XM_038554707   ⟹   XP_038410635
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01247,752,753 - 47,767,667 (-)NCBI
RefSeq Acc Id: XM_038618573   ⟹   XP_038474501
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01247,561,070 - 47,584,545 (-)NCBI
RefSeq Acc Id: XM_038618574   ⟹   XP_038474502
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01247,561,070 - 47,584,545 (-)NCBI
RefSeq Acc Id: XM_038618575   ⟹   XP_038474503
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01247,561,070 - 47,575,979 (-)NCBI
RefSeq Acc Id: XM_038618576   ⟹   XP_038474504
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01247,561,070 - 47,584,545 (-)NCBI
RefSeq Acc Id: XM_038618577   ⟹   XP_038474505
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01247,561,070 - 47,584,546 (-)NCBI
RefSeq Acc Id: XM_038618578   ⟹   XP_038474506
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01247,561,070 - 47,575,982 (-)NCBI
RefSeq Acc Id: XM_038682140   ⟹   XP_038538068
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1247,344,588 - 47,368,063 (-)NCBI
RefSeq Acc Id: XM_038682149   ⟹   XP_038538077
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1247,344,588 - 47,368,064 (-)NCBI
RefSeq Acc Id: XM_038682159   ⟹   XP_038538087
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1247,344,588 - 47,359,499 (-)NCBI
RefSeq Acc Id: XM_038684131   ⟹   XP_038540059
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01248,342,012 - 48,365,458 (-)NCBI
RefSeq Acc Id: XM_038684132   ⟹   XP_038540060
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01248,342,012 - 48,365,458 (-)NCBI
RefSeq Acc Id: XM_038684133   ⟹   XP_038540061
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01248,342,012 - 48,356,904 (-)NCBI
RefSeq Acc Id: XM_038684134   ⟹   XP_038540062
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01248,342,012 - 48,365,458 (-)NCBI
RefSeq Acc Id: XM_038684135   ⟹   XP_038540063
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01248,342,012 - 48,365,459 (-)NCBI
RefSeq Acc Id: XM_038684136   ⟹   XP_038540064
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01248,342,012 - 48,356,907 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005627675 (Get FASTA)   NCBI Sequence Viewer  
  XP_005627676 (Get FASTA)   NCBI Sequence Viewer  
  XP_005627677 (Get FASTA)   NCBI Sequence Viewer  
  XP_038348336 (Get FASTA)   NCBI Sequence Viewer  
  XP_038348337 (Get FASTA)   NCBI Sequence Viewer  
  XP_038348338 (Get FASTA)   NCBI Sequence Viewer  
  XP_038348339 (Get FASTA)   NCBI Sequence Viewer  
  XP_038348340 (Get FASTA)   NCBI Sequence Viewer  
  XP_038348341 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410630 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410631 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410632 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410633 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410634 (Get FASTA)   NCBI Sequence Viewer  
  XP_038410635 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474501 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474502 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474503 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474504 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474505 (Get FASTA)   NCBI Sequence Viewer  
  XP_038474506 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538068 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538077 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538087 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540059 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540060 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540061 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540062 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540063 (Get FASTA)   NCBI Sequence Viewer  
  XP_038540064 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAG37782 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005627675   ⟸   XM_005627618
- Peptide Label: isoform X1
- UniProtKB: F1Q345 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005627676   ⟸   XM_005627619
- Peptide Label: isoform X1
- UniProtKB: F1Q345 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005627677   ⟸   XM_005627620
- Peptide Label: isoform X1
- UniProtKB: F1Q345 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000004587   ⟸   ENSCAFT00000004948
RefSeq Acc Id: XP_038348340   ⟸   XM_038492412
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038348339   ⟸   XM_038492411
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038348336   ⟸   XM_038492408
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038348337   ⟸   XM_038492409
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038348341   ⟸   XM_038492413
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038348338   ⟸   XM_038492410
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038474505   ⟸   XM_038618577
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038474504   ⟸   XM_038618576
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038474501   ⟸   XM_038618573
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038474502   ⟸   XM_038618574
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038474506   ⟸   XM_038618578
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038474503   ⟸   XM_038618575
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038540063   ⟸   XM_038684135
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038540062   ⟸   XM_038684134
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038540059   ⟸   XM_038684131
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038540060   ⟸   XM_038684132
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038540064   ⟸   XM_038684136
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038540061   ⟸   XM_038684133
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038538077   ⟸   XM_038682149
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038538068   ⟸   XM_038682140
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038538087   ⟸   XM_038682159
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038410634   ⟸   XM_038554706
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038410633   ⟸   XM_038554705
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038410630   ⟸   XM_038554702
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038410631   ⟸   XM_038554703
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038410635   ⟸   XM_038554707
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038410632   ⟸   XM_038554704
- Peptide Label: isoform X1
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000003085 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00845006099 UniProtKB/TrEMBL
Ensembl Protein ENSCAFP00000004587.4 UniProtKB/TrEMBL
  ENSCAFP00845008438.1 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000004948.4 UniProtKB/TrEMBL
  ENSCAFT00845010813.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro Canbinoid_rcpt_1 UniProtKB/TrEMBL
  Cnbnoid_rcpt UniProtKB/TrEMBL
  GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
NCBI Gene CNR1 ENTREZGENE
PANTHER G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
  PTHR22750:SF47 UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS CANABINOID1R UniProtKB/TrEMBL
  CANNABINOIDR UniProtKB/TrEMBL
  GPCRRHODOPSN UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8I3MR82_CANLF UniProtKB/TrEMBL
  F1Q345 ENTREZGENE
  Q9BFC5_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:39426 ENTREZGENE