Gene: MAB21L4 (mab-21 like 4) Canis lupus familiaris
Analyze
Symbol:
MAB21L4
Name:
mab-21 like 4
RGD ID:
12184897
Description:
ASSOCIATED WITH Bethlem Myopathy 1A (ortholog); chromosome 2q37 deletion syndrome (ortholog); D-2-hydroxyglutaric aciduria 1 (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
C25H2orf54; chromosome 25 open reading frame, human C2orf54; LOC100855821; LOC609000; uncharacterized protein C2orf54; uncharacterized protein C2orf54 homolog; uncharacterized protein C2orf54-like
RGD Orthologs
Alliance Orthologs
More Info
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More Info
Species
Gene symbol and name
Data Source
Assertion derived from
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Orthologs 1
Homo sapiens (human):
MAB21L4 (mab-21 like 4)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):
Mab21l4 (mab-21-like 4)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):
Mab21l4 (mab-21 like 4)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Mab21l4 (mab-21 like 4)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
MAB21L4 (mab-21 like 4)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Mab21l4 (mab-21 like 4)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
MAB21L4 (mab-21 like 4)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
MAB21L4 (mab-21 like 4)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Mab21l4 (mab-21 like 4)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Latest Assembly:
CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 25 50,731,528 - 50,738,661 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 25 51,195,414 - 51,230,786 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 25 51,177,278 - 51,212,387 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 25 51,177,283 - 51,183,962 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 25 51,018,276 - 51,025,673 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 25 50,764,682 - 50,799,949 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 25 51,040,504 - 51,075,966 (-) NCBI UU_Cfam_GSD_1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Imported Disease Annotations - ClinVar
References
Genomics
Comparative Map Data
MAB21L4 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 25 50,731,528 - 50,738,661 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 25 51,195,414 - 51,230,786 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 25 51,177,278 - 51,212,387 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 25 51,177,283 - 51,183,962 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 25 51,018,276 - 51,025,673 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 25 50,764,682 - 50,799,949 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 25 51,040,504 - 51,075,966 (-) NCBI UU_Cfam_GSD_1.0
MAB21L4 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 2 240,886,048 - 240,896,839 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 2 240,886,048 - 240,896,889 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 2 241,825,465 - 241,835,573 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 2 241,474,138 - 241,484,246 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 2 235,498,112 - 235,508,356 (-) NCBI Celera Cytogenetic Map 2 q37.3 NCBI HuRef 2 233,586,038 - 233,596,152 (-) NCBI HuRef CHM1_1 2 241,831,514 - 241,841,622 (-) NCBI CHM1_1 T2T-CHM13v2.0 2 241,385,221 - 241,396,155 (-) NCBI T2T-CHM13v2.0
Mab21l4 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 1 93,079,076 - 93,088,679 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 1 93,079,071 - 93,088,670 (-) Ensembl GRCm39 Ensembl GRCm38 1 93,151,354 - 93,160,956 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 1 93,151,349 - 93,160,948 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 1 95,047,932 - 95,057,525 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 1 94,981,762 - 94,991,354 (-) NCBI MGSCv36 mm8 Celera 1 96,096,009 - 96,105,603 (-) NCBI Celera Cytogenetic Map 1 D NCBI cM Map 1 47.03 NCBI
Mab21l4 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 9 101,138,408 - 101,148,516 (-) NCBI GRCr8 mRatBN7.2 9 93,690,455 - 93,701,267 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 9 93,690,999 - 93,700,506 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 9 102,126,555 - 102,136,062 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 9 107,262,484 - 107,271,990 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 9 105,618,634 - 105,628,140 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 9 100,296,780 - 100,307,415 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 9 100,296,781 - 100,306,829 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 9 99,954,885 - 99,965,505 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 9 92,427,931 - 92,437,438 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 9 91,226,354 - 91,235,861 (-) NCBI Celera Cytogenetic Map 9 q36 NCBI
Mab21l4 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955542 701,633 - 709,315 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955542 699,717 - 708,760 (+) NCBI ChiLan1.0 ChiLan1.0
MAB21L4 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 13 143,574,547 - 143,584,700 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 2B 143,589,512 - 143,599,665 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 2B 128,144,248 - 128,154,670 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 2B 246,946,812 - 246,956,949 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 2B 246,946,812 - 246,956,949 (-) Ensembl panpan1.1 panPan2
Mab21l4 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
MAB21L4 (Sus scrofa - pig)
MAB21L4 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 10 126,952,353 - 126,964,319 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 10 126,949,416 - 126,962,277 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666040 72,426,311 - 72,435,657 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Mab21l4 (Heterocephalus glaber - naked mole-rat)
Expression
RNA-SEQ Expression
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
2
5
1
17
19
16
6
1
6
6
15
4
9
14
10
Too many to show, limit is 500. Download them if you would like to view them all.
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RGD:{{ data.value }}
Sequence
Ensembl Acc Id:
ENSCAFT00845036724 ⟹ ENSCAFP00845028751
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 Ensembl 25 51,177,283 - 51,183,962 (-) Ensembl
RefSeq Acc Id:
XM_038436001 ⟹ XP_038291929
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 25 51,177,278 - 51,184,594 (-) NCBI
RefSeq Acc Id:
XM_038436002 ⟹ XP_038291930
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 25 51,177,278 - 51,212,387 (-) NCBI
RefSeq Acc Id:
XM_038458793 ⟹ XP_038314721
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source Dog10K_Boxer_Tasha 25 51,195,414 - 51,230,786 (-) NCBI
RefSeq Acc Id:
XM_038510920 ⟹ XP_038366848
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UMICH_Zoey_3.1 25 51,018,276 - 51,025,673 (-) NCBI
RefSeq Acc Id:
XM_038574424 ⟹ XP_038430352
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UU_Cfam_GSD_1.0 25 51,040,504 - 51,047,824 (-) NCBI
RefSeq Acc Id:
XM_038574425 ⟹ XP_038430353
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UU_Cfam_GSD_1.0 25 51,040,504 - 51,075,966 (-) NCBI
RefSeq Acc Id:
XM_038638649 ⟹ XP_038494577
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UNSW_CanFamBas_1.0 25 50,764,682 - 50,771,999 (-) NCBI
RefSeq Acc Id:
XM_038638650 ⟹ XP_038494578
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UNSW_CanFamBas_1.0 25 50,764,682 - 50,799,949 (-) NCBI
RefSeq Acc Id:
XM_846178 ⟹ XP_851271
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 25 50,731,528 - 50,738,661 (-) NCBI Dog10K_Boxer_Tasha 25 51,195,414 - 51,202,711 (-) NCBI
Sequence:
GGGGACCGGGCACTAGGCCCCCACCCCAGGACGGCGCAGGGGAGGTGGCCGGGCCCCGGGAGGG GCGGAGTCGGGGTGACAGGAGGGAGGAGCCCCACCCCGCCCCGGGCTCCCAGTGACATTCCTGG CTGCTGGCGACTGACTCGGCCCCACCTGAGAGGCCAGGGCCGGGCCTGGCTATTTAACCGGGTG GCGGTGGCGGTGGCGGTGGCTCTGTGCTCGGGGATCCTGCTCCGCGGAGCTGGGCCCCACCTGG AGGGCAGGTGCGTCCCCCCGGCCCGCCGGCCTCAGTGTGGCCCTCGCAGGCTGCCCTGCCCCGG GCCCAGCCATGGCGGTGCAGGTGCCCCTGTGGCACCACTACCTGCGGGCCATCCGCTCCAGGGG GGCGCCGCGGGCGCGGGACTACCAGCGTGCCGAGGACGTGCTGCTCACCGTCCTGGAGCGCGTG CACGACCTGGACCCGCGCTTCCTCGTGGACTACTCCCGTGACCTGGAGGCCTTCCAGTTCGCCC TGCGCTCCTCTGAGGACCCCCTGGACATGGAGGTGCCCCTGTGCGTGGACGCCGAGGCCCTCCT GGTGGAAGAGGTGGGGGCCGCCGAGGCAGGGGACGGCCCCGCGTCCTGCCGCCTGGGGGTGTCC CGGGAAGGGCCCCGGCCCGAGCAGTGGACGGCCGACGACGTCTTCAACGTCTCCTCGGACGGGA GCACCAAGTGCTTCGGCCACATCGTGCCCAGCAAGGTCCTGCGCGTCCTCAAGGACCTTCTGGT GGCGGCCATCGTGCACTGCAGGCACCAGAGCCTCATCGCGCCAGGTTCCCTGAACGCGGACAGC CTGAGGGAGGAGGAGCTGCACCTGTCCCTGCTGGTGTCCAGCGGCTGGAGGACGGTCCGCTTCC ACGTCGTGCCCGTGGTTCGCAGAAAGCACCGGGTGCCCGCCCTGGAGGGGGCCCAGCTGATGCG TGCGTTTCCTGGGGGCAGCTTGAGAAGGATCGTCGGCCAGGAGGTGGCCCTGGTGCCGGCCGGC GCCCAGCTCTGGAGGGTCTCCACCGACCACCTGCTCACCCGGCTGCTCGGTGCGCTGGGCTCCT TCCGGGGCCACCGCCTGGACAGCCTCTCCATCCTGGACCGGGTCAACCACGAGAGCTGGCGTGA CAGCGGCCAGAGCCCCGGCCTGACCTACGGCCACCTGAAGACCGTGCTGCTGTGGGCCTCGGTG CTCTTCCCCGCGCCCGAGGACTGGGCGGAGCTGCAGGGCGCCGTGTACCGGCTGCTGGTGGTGC TGCTCTGCTGTCTGGCCACCAGGAACCTGCCGCACTTCCTCTACCCCGGCTGCAACCTGCTGCG GGACACCGGCCTGGACCTCAACGCCCTGTACCAGCGGGTGGAGCACTTCGCCAGCCAACCTGAG GCGTCCCTGCGTATCCACGTCACCCACCTGGGCCGCAGCCCCCCACCGCGCATCGGCAACGGGG TCAAGGCGCTCCTGCAGCTGCCCGCCAGCAACCCTGCCTACTGGGCCACCGCCTACTTCGACGT CCTGCTGGACAAGTTCCAGGTCTTCAACATCCAGGATAAGGAACGGATCTCCGCCATGCAGAGC ATCTTCCAGAAGACCAAGACCCTGGACAGCGAGGAGTGCTGAGCTGGCTTCCCCCGACTCAGTC TTTACCGCCCACGGCCTGGCTGCTCTGCCCCACAGAGGATCCCAGGACACTTGGGGGAGAGTGG GCTTCTCCTGAGGGGGGCGGTGGGTGGTAGGGACGTCCACAGGGCCACCGCAGACTGTCAGGAT GGCCTCGTGGGAGCCTGAGCGTGCCGGGCAGCAGGCCTCTGGGAGCAGCTGCCCAAACGCCGGG CCTGGGATGAGGTGCCTTGGGTTTCACAAGATGCGTGTTGACCCATTCTGTGTGATGTCATCAG ACTCTCAAAACCAAGCGTCTGCATGACACCTGGAGCCCCAGCGCTTGTCCCCACCTGCGTCACG AGCCACTCTGTGGTGACAAATACTGTCTATCTGATCTCGAATAAACTCGCGCACTGGATATACA
hide sequence
RefSeq Acc Id:
XP_851271 ⟸ XM_846178
- Peptide Label:
isoform X1
- UniProtKB:
A0A8P0NQ94 (UniProtKB/TrEMBL), A0A8C0Z5F8 (UniProtKB/TrEMBL)
- Sequence:
MAVQVPLWHHYLRAIRSRGAPRARDYQRAEDVLLTVLERVHDLDPRFLVDYSRDLEAFQFALRS SEDPLDMEVPLCVDAEALLVEEVGAAEAGDGPASCRLGVSREGPRPEQWTADDVFNVSSDGSTK CFGHIVPSKVLRVLKDLLVAAIVHCRHQSLIAPGSLNADSLREEELHLSLLVSSGWRTVRFHVV PVVRRKHRVPALEGAQLMRAFPGGSLRRIVGQEVALVPAGAQLWRVSTDHLLTRLLGALGSFRG HRLDSLSILDRVNHESWRDSGQSPGLTYGHLKTVLLWASVLFPAPEDWAELQGAVYRLLVVLLC CLATRNLPHFLYPGCNLLRDTGLDLNALYQRVEHFASQPEASLRIHVTHLGRSPPPRIGNGVKA LLQLPASNPAYWATAYFDVLLDKFQVFNIQDKERISAMQSIFQKTKTLDSEEC
hide sequence
RefSeq Acc Id:
XP_038366848 ⟸ XM_038510920
- Peptide Label:
isoform X1
RefSeq Acc Id:
XP_038494578 ⟸ XM_038638650
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_038494577 ⟸ XM_038638649
- Peptide Label:
isoform X1
RefSeq Acc Id:
XP_038291930 ⟸ XM_038436002
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_038291929 ⟸ XM_038436001
- Peptide Label:
isoform X1
- UniProtKB:
A0A8C0Z5F8 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_038314721 ⟸ XM_038458793
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_038430353 ⟸ XM_038574425
- Peptide Label:
isoform X2
RefSeq Acc Id:
XP_038430352 ⟸ XM_038574424
- Peptide Label:
isoform X1
- UniProtKB:
A0A8C0Z5F8 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSCAFP00845028751 ⟸ ENSCAFT00845036724
Additional Information
Nomenclature History
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2021-01-14
MAB21L4
mab-21 like 4
LOC100855821
uncharacterized protein C2orf54
Data merged from RGD:12204698
737654
PROVISIONAL
2021-01-12
MAB21L4
mab-21 like 4
LOC609000
uncharacterized protein C2orf54-like
Symbol and/or name change
5135510
APPROVED
2017-09-12
LOC100855821
uncharacterized protein C2orf54
C25H2orf54
chromosome 25 open reading frame, human C2orf54
Symbol and/or name change
5135510
APPROVED