PMS1 (PMS1 homolog 1, mismatch repair system component) - Rat Genome Database

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Gene: PMS1 (PMS1 homolog 1, mismatch repair system component) Canis lupus familiaris
Analyze
Symbol: PMS1
Name: PMS1 homolog 1, mismatch repair system component
RGD ID: 12184099
Description: ENCODES a protein that exhibits ATP binding (inferred); ATP hydrolysis activity (inferred); ATP-dependent DNA damage sensor activity (inferred); INVOLVED IN mismatch repair (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; mismatch repair pathway; ASSOCIATED WITH breast cancer (ortholog); Colonic Polyps (ortholog); colorectal cancer (ortholog); FOUND IN membrane (inferred); mismatch repair complex (inferred); MutLalpha complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: PMS1 postmeiotic segregation increased 1; PMS1 protein homolog 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.137502,752 - 609,640 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl37502,747 - 790,904 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha371,475,758 - 1,583,050 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.037395,761 - 503,686 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl37395,722 - 503,685 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.137406,588 - 513,890 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.037375,065 - 482,126 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.037403,027 - 510,344 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PMS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.137502,752 - 609,640 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl37502,747 - 790,904 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha371,475,758 - 1,583,050 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.037395,761 - 503,686 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl37395,722 - 503,685 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.137406,588 - 513,890 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.037375,065 - 482,126 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.037403,027 - 510,344 (+)NCBIUU_Cfam_GSD_1.0
PMS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382189,784,450 - 189,877,629 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2189,784,085 - 189,877,629 (+)EnsemblGRCh38hg38GRCh38
GRCh372190,649,176 - 190,742,355 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362190,357,355 - 190,450,600 (+)NCBINCBI36Build 36hg18NCBI36
Build 342190,474,615 - 190,567,860NCBI
Celera2184,243,739 - 184,337,288 (+)NCBICelera
Cytogenetic Map2q32.2NCBI
HuRef2182,508,462 - 182,602,272 (+)NCBIHuRef
CHM1_12190,654,694 - 190,748,309 (+)NCBICHM1_1
T2T-CHM13v2.02190,273,733 - 190,366,996 (+)NCBIT2T-CHM13v2.0
Pms1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39153,225,794 - 53,336,190 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl153,228,346 - 53,336,177 (-)EnsemblGRCm39 Ensembl
GRCm38153,189,187 - 53,297,031 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl153,189,187 - 53,297,018 (-)EnsemblGRCm38mm10GRCm38
MGSCv37153,246,031 - 53,353,840 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36153,133,732 - 53,241,541 (-)NCBIMGSCv36mm8
Celera153,728,483 - 53,836,401 (-)NCBICelera
Cytogenetic Map1C1.1NCBI
cM Map126.99NCBI
Pms1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8955,721,393 - 55,832,225 (+)NCBIGRCr8
mRatBN7.2948,229,403 - 48,340,237 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl948,253,410 - 48,340,237 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx956,789,682 - 56,875,049 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0961,912,501 - 61,997,868 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0960,208,491 - 60,293,858 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0953,120,656 - 53,206,520 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl953,120,656 - 53,206,516 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0952,784,772 - 52,871,014 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4945,203,344 - 45,292,624 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1945,204,757 - 45,294,034 (+)NCBI
Celera945,919,538 - 46,005,758 (+)NCBICelera
Cytogenetic Map9q22NCBI
Pms1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554039,022,078 - 9,100,442 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554039,021,488 - 9,100,442 (-)NCBIChiLan1.0ChiLan1.0
PMS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21392,475,954 - 92,566,780 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B92,490,937 - 92,581,763 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B77,090,215 - 77,180,724 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B195,010,233 - 195,100,492 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B195,010,233 - 195,100,492 (+)Ensemblpanpan1.1panPan2
Pms1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303148,621,339 - 148,718,585 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365068,119,494 - 8,197,768 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365068,118,816 - 8,197,040 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PMS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1594,351,630 - 94,476,506 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11594,351,603 - 94,476,505 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215105,412,685 - 105,513,299 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PMS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11075,305,129 - 75,392,193 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1075,311,887 - 75,392,590 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040124,084,971 - 124,175,531 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in PMS1
708 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 4 5 16 6 6 5 12 8 10 5
Low 1 6 6 6 1 1
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005640441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005640442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005640443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005640444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005640447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005640449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014110946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014110947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022414962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022414963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022414964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022414965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447361 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447363 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038447373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038463874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038463875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521427 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521428 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038521434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585129 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585135 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038585138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_536002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000014945   ⟹   ENSCAFP00000013832
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl37521,737 - 609,637 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000069036   ⟹   ENSCAFP00000056229
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl37502,747 - 609,637 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000071343   ⟹   ENSCAFP00000044572
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl37502,747 - 609,637 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000071601   ⟹   ENSCAFP00000060101
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl37502,747 - 609,637 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000072030   ⟹   ENSCAFP00000049644
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl37502,747 - 609,637 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000073840   ⟹   ENSCAFP00000049332
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl37502,747 - 609,637 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000075767   ⟹   ENSCAFP00000062446
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl37502,747 - 790,904 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000079629   ⟹   ENSCAFP00000049651
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl37502,747 - 609,569 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000090641   ⟹   ENSCAFP00000043346
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl37520,920 - 606,172 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000091997   ⟹   ENSCAFP00000066190
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl37502,747 - 606,172 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042016   ⟹   ENSCAFP00845032953
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl37395,722 - 503,685 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042097   ⟹   ENSCAFP00845033017
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl37395,722 - 503,685 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042212   ⟹   ENSCAFP00845033103
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl37395,722 - 503,685 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042313   ⟹   ENSCAFP00845033169
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl37395,722 - 503,685 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042414   ⟹   ENSCAFP00845033252
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl37395,722 - 503,685 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042501   ⟹   ENSCAFP00845033313
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl37395,728 - 503,616 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042536   ⟹   ENSCAFP00845033344
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl37395,728 - 500,227 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042598   ⟹   ENSCAFP00845033397
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl37395,728 - 439,322 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042645   ⟹   ENSCAFP00845033439
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl37395,739 - 503,685 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042791   ⟹   ENSCAFP00845033543
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl37415,283 - 503,685 (+)Ensembl
RefSeq Acc Id: XM_005640441   ⟹   XP_005640498
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.137502,752 - 609,639 (+)NCBI
Dog10K_Boxer_Tasha371,475,759 - 1,583,050 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005640442   ⟹   XP_005640499
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.137522,067 - 609,640 (+)NCBI
Dog10K_Boxer_Tasha371,495,277 - 1,583,050 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005640443   ⟹   XP_005640500
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.137520,985 - 609,639 (+)NCBI
Dog10K_Boxer_Tasha371,494,222 - 1,583,050 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005640444   ⟹   XP_005640501
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.137522,922 - 609,640 (+)NCBI
Dog10K_Boxer_Tasha371,496,123 - 1,583,050 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005640447   ⟹   XP_005640504
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.137521,721 - 609,640 (+)NCBI
Dog10K_Boxer_Tasha371,494,892 - 1,583,050 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005640449   ⟹   XP_005640506
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.137521,721 - 606,287 (+)NCBI
Dog10K_Boxer_Tasha371,494,892 - 1,579,709 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014110946   ⟹   XP_013966421
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.137522,721 - 609,640 (+)NCBI
Dog10K_Boxer_Tasha371,495,927 - 1,583,050 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014110947   ⟹   XP_013966422
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.137502,759 - 609,639 (+)NCBI
Dog10K_Boxer_Tasha371,475,758 - 1,583,050 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022414962   ⟹   XP_022270670
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.137521,721 - 609,545 (+)NCBI
Dog10K_Boxer_Tasha371,494,892 - 1,582,956 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022414963   ⟹   XP_022270671
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.137521,721 - 609,640 (+)NCBI
Dog10K_Boxer_Tasha371,494,892 - 1,583,050 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038447361   ⟹   XP_038303289
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.037415,277 - 503,686 (+)NCBI
RefSeq Acc Id: XM_038447362   ⟹   XP_038303290
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.037395,762 - 503,686 (+)NCBI
RefSeq Acc Id: XM_038447363   ⟹   XP_038303291
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.037415,662 - 503,686 (+)NCBI
RefSeq Acc Id: XM_038447364   ⟹   XP_038303292
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.037414,607 - 503,686 (+)NCBI
RefSeq Acc Id: XM_038447365   ⟹   XP_038303293
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.037416,490 - 503,686 (+)NCBI
RefSeq Acc Id: XM_038447366   ⟹   XP_038303294
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.037414,975 - 503,686 (+)NCBI
RefSeq Acc Id: XM_038447367   ⟹   XP_038303295
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.037416,312 - 503,686 (+)NCBI
RefSeq Acc Id: XM_038447368   ⟹   XP_038303296
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.037395,761 - 503,686 (+)NCBI
RefSeq Acc Id: XM_038447369   ⟹   XP_038303297
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.037415,277 - 503,592 (+)NCBI
RefSeq Acc Id: XM_038447370   ⟹   XP_038303298
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.037415,277 - 503,686 (+)NCBI
RefSeq Acc Id: XM_038447371   ⟹   XP_038303299
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.037415,277 - 503,686 (+)NCBI
RefSeq Acc Id: XM_038447372   ⟹   XP_038303300
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.037415,277 - 500,349 (+)NCBI
RefSeq Acc Id: XM_038447373   ⟹   XP_038303301
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.037415,277 - 465,635 (+)NCBI
RefSeq Acc Id: XM_038463874   ⟹   XP_038319802
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha371,494,590 - 1,583,050 (+)NCBI
RefSeq Acc Id: XM_038463875   ⟹   XP_038319803
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha371,494,892 - 1,545,001 (+)NCBI
RefSeq Acc Id: XM_038521421   ⟹   XP_038377349
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.137425,698 - 513,890 (+)NCBI
RefSeq Acc Id: XM_038521422   ⟹   XP_038377350
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.137406,589 - 513,890 (+)NCBI
RefSeq Acc Id: XM_038521423   ⟹   XP_038377351
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.137426,083 - 513,890 (+)NCBI
RefSeq Acc Id: XM_038521424   ⟹   XP_038377352
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.137425,028 - 513,890 (+)NCBI
RefSeq Acc Id: XM_038521425   ⟹   XP_038377353
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.137426,929 - 513,890 (+)NCBI
RefSeq Acc Id: XM_038521427   ⟹   XP_038377355
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.137425,396 - 513,890 (+)NCBI
RefSeq Acc Id: XM_038521428   ⟹   XP_038377356
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.137426,733 - 513,890 (+)NCBI
RefSeq Acc Id: XM_038521429   ⟹   XP_038377357
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.137406,588 - 513,890 (+)NCBI
RefSeq Acc Id: XM_038521430   ⟹   XP_038377358
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.137425,698 - 513,796 (+)NCBI
RefSeq Acc Id: XM_038521431   ⟹   XP_038377359
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.137425,698 - 513,890 (+)NCBI
RefSeq Acc Id: XM_038521432   ⟹   XP_038377360
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.137425,698 - 513,890 (+)NCBI
RefSeq Acc Id: XM_038521433   ⟹   XP_038377361
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.137425,698 - 510,547 (+)NCBI
RefSeq Acc Id: XM_038521434   ⟹   XP_038377362
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.137425,698 - 475,840 (+)NCBI
RefSeq Acc Id: XM_038585126   ⟹   XP_038441054
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.037422,169 - 510,344 (+)NCBI
RefSeq Acc Id: XM_038585127   ⟹   XP_038441055
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.037403,028 - 510,344 (+)NCBI
RefSeq Acc Id: XM_038585128   ⟹   XP_038441056
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.037422,555 - 510,344 (+)NCBI
RefSeq Acc Id: XM_038585129   ⟹   XP_038441057
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.037421,499 - 510,344 (+)NCBI
RefSeq Acc Id: XM_038585130   ⟹   XP_038441058
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.037423,401 - 510,344 (+)NCBI
RefSeq Acc Id: XM_038585131   ⟹   XP_038441059
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.037421,867 - 510,344 (+)NCBI
RefSeq Acc Id: XM_038585132   ⟹   XP_038441060
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.037423,205 - 510,344 (+)NCBI
RefSeq Acc Id: XM_038585133   ⟹   XP_038441061
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.037403,027 - 510,344 (+)NCBI
RefSeq Acc Id: XM_038585134   ⟹   XP_038441062
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.037422,169 - 510,250 (+)NCBI
RefSeq Acc Id: XM_038585135   ⟹   XP_038441063
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.037422,169 - 510,344 (+)NCBI
RefSeq Acc Id: XM_038585136   ⟹   XP_038441064
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.037422,169 - 510,344 (+)NCBI
RefSeq Acc Id: XM_038585137   ⟹   XP_038441065
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.037422,169 - 507,000 (+)NCBI
RefSeq Acc Id: XM_038585138   ⟹   XP_038441066
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.037422,169 - 472,289 (+)NCBI
RefSeq Acc Id: XM_038649536   ⟹   XP_038505464
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.037394,187 - 482,126 (+)NCBI
RefSeq Acc Id: XM_038649537   ⟹   XP_038505465
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.037375,066 - 482,126 (+)NCBI
RefSeq Acc Id: XM_038649538   ⟹   XP_038505466
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.037394,572 - 482,126 (+)NCBI
RefSeq Acc Id: XM_038649539   ⟹   XP_038505467
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.037393,516 - 482,126 (+)NCBI
RefSeq Acc Id: XM_038649540   ⟹   XP_038505468
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.037395,418 - 482,126 (+)NCBI
RefSeq Acc Id: XM_038649541   ⟹   XP_038505469
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.037393,884 - 482,126 (+)NCBI
RefSeq Acc Id: XM_038649542   ⟹   XP_038505470
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.037395,222 - 482,126 (+)NCBI
RefSeq Acc Id: XM_038649543   ⟹   XP_038505471
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.037375,065 - 482,126 (+)NCBI
RefSeq Acc Id: XM_038649544   ⟹   XP_038505472
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.037394,187 - 482,032 (+)NCBI
RefSeq Acc Id: XM_038649545   ⟹   XP_038505473
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.037394,187 - 482,126 (+)NCBI
RefSeq Acc Id: XM_038649546   ⟹   XP_038505474
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.037394,187 - 482,126 (+)NCBI
RefSeq Acc Id: XM_038649547   ⟹   XP_038505475
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.037394,187 - 478,792 (+)NCBI
RefSeq Acc Id: XM_038649548   ⟹   XP_038505476
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.037394,187 - 444,081 (+)NCBI
RefSeq Acc Id: XM_536002   ⟹   XP_536002
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.137521,721 - 609,640 (+)NCBI
Dog10K_Boxer_Tasha371,494,892 - 1,583,050 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005640498 (Get FASTA)   NCBI Sequence Viewer  
  XP_005640499 (Get FASTA)   NCBI Sequence Viewer  
  XP_005640500 (Get FASTA)   NCBI Sequence Viewer  
  XP_005640501 (Get FASTA)   NCBI Sequence Viewer  
  XP_005640504 (Get FASTA)   NCBI Sequence Viewer  
  XP_005640506 (Get FASTA)   NCBI Sequence Viewer  
  XP_013966421 (Get FASTA)   NCBI Sequence Viewer  
  XP_013966422 (Get FASTA)   NCBI Sequence Viewer  
  XP_022270670 (Get FASTA)   NCBI Sequence Viewer  
  XP_022270671 (Get FASTA)   NCBI Sequence Viewer  
  XP_038303289 (Get FASTA)   NCBI Sequence Viewer  
  XP_038303290 (Get FASTA)   NCBI Sequence Viewer  
  XP_038303291 (Get FASTA)   NCBI Sequence Viewer  
  XP_038303292 (Get FASTA)   NCBI Sequence Viewer  
  XP_038303293 (Get FASTA)   NCBI Sequence Viewer  
  XP_038303294 (Get FASTA)   NCBI Sequence Viewer  
  XP_038303295 (Get FASTA)   NCBI Sequence Viewer  
  XP_038303296 (Get FASTA)   NCBI Sequence Viewer  
  XP_038303297 (Get FASTA)   NCBI Sequence Viewer  
  XP_038303298 (Get FASTA)   NCBI Sequence Viewer  
  XP_038303299 (Get FASTA)   NCBI Sequence Viewer  
  XP_038303300 (Get FASTA)   NCBI Sequence Viewer  
  XP_038303301 (Get FASTA)   NCBI Sequence Viewer  
  XP_038319802 (Get FASTA)   NCBI Sequence Viewer  
  XP_038319803 (Get FASTA)   NCBI Sequence Viewer  
  XP_038377349 (Get FASTA)   NCBI Sequence Viewer  
  XP_038377350 (Get FASTA)   NCBI Sequence Viewer  
  XP_038377351 (Get FASTA)   NCBI Sequence Viewer  
  XP_038377352 (Get FASTA)   NCBI Sequence Viewer  
  XP_038377353 (Get FASTA)   NCBI Sequence Viewer  
  XP_038377355 (Get FASTA)   NCBI Sequence Viewer  
  XP_038377356 (Get FASTA)   NCBI Sequence Viewer  
  XP_038377357 (Get FASTA)   NCBI Sequence Viewer  
  XP_038377358 (Get FASTA)   NCBI Sequence Viewer  
  XP_038377359 (Get FASTA)   NCBI Sequence Viewer  
  XP_038377360 (Get FASTA)   NCBI Sequence Viewer  
  XP_038377361 (Get FASTA)   NCBI Sequence Viewer  
  XP_038377362 (Get FASTA)   NCBI Sequence Viewer  
  XP_038441054 (Get FASTA)   NCBI Sequence Viewer  
  XP_038441055 (Get FASTA)   NCBI Sequence Viewer  
  XP_038441056 (Get FASTA)   NCBI Sequence Viewer  
  XP_038441057 (Get FASTA)   NCBI Sequence Viewer  
  XP_038441058 (Get FASTA)   NCBI Sequence Viewer  
  XP_038441059 (Get FASTA)   NCBI Sequence Viewer  
  XP_038441060 (Get FASTA)   NCBI Sequence Viewer  
  XP_038441061 (Get FASTA)   NCBI Sequence Viewer  
  XP_038441062 (Get FASTA)   NCBI Sequence Viewer  
  XP_038441063 (Get FASTA)   NCBI Sequence Viewer  
  XP_038441064 (Get FASTA)   NCBI Sequence Viewer  
  XP_038441065 (Get FASTA)   NCBI Sequence Viewer  
  XP_038441066 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505464 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505465 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505466 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505467 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505468 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505469 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505470 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505471 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505472 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505473 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505474 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505475 (Get FASTA)   NCBI Sequence Viewer  
  XP_038505476 (Get FASTA)   NCBI Sequence Viewer  
  XP_536002 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000013832.5
  ENSCAFP00000043346.2
  ENSCAFP00000044572.1
  ENSCAFP00000049332.1
  ENSCAFP00000049644.1
  ENSCAFP00000049651.1
  ENSCAFP00000056229.1
  ENSCAFP00000060101.1
  ENSCAFP00000062446.2
  ENSCAFP00000066190.1
  ENSCAFP00030024853.1
  ENSCAFP00030024933.1
  ENSCAFP00030025008.1
  ENSCAFP00030025082.1
  ENSCAFP00030025118.1
  ENSCAFP00030025205.1
  ENSCAFP00030025223.1
  ENSCAFP00030025254.1
  ENSCAFP00030025338.1
  ENSCAFP00040020339.1
  ENSCAFP00040020412.1
  ENSCAFP00040020473.1
  ENSCAFP00040020566.1
  ENSCAFP00040020628.1
  ENSCAFP00040020709.1
  ENSCAFP00040020740.1
  ENSCAFP00040020812.1
  ENSCAFP00040020844.1
  ENSCAFP00040020945.1
  ENSCAFP00845032953
  ENSCAFP00845032953.1
  ENSCAFP00845033017.1
  ENSCAFP00845033103.1
  ENSCAFP00845033169
  ENSCAFP00845033169.1
  ENSCAFP00845033252.1
  ENSCAFP00845033313.1
  ENSCAFP00845033344
  ENSCAFP00845033344.1
  ENSCAFP00845033397.1
  ENSCAFP00845033439
  ENSCAFP00845033439.1
  ENSCAFP00845033543
  ENSCAFP00845033543.1
RefSeq Acc Id: XP_005640498   ⟸   XM_005640441
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013966422   ⟸   XM_014110947
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SFT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005640500   ⟸   XM_005640443
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_536002   ⟸   XM_536002
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005640504   ⟸   XM_005640447
- Peptide Label: isoform X4
- UniProtKB: A0A8C0NLA3 (UniProtKB/TrEMBL),   A0A8I3S833 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005640506   ⟸   XM_005640449
- Peptide Label: isoform X6
- UniProtKB: A0A8I3PGW9 (UniProtKB/TrEMBL),   A0A8P0NBJ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005640499   ⟸   XM_005640442
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013966421   ⟸   XM_014110946
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005640501   ⟸   XM_005640444
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022270671   ⟸   XM_022414963
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SG34 (UniProtKB/TrEMBL),   A0A8I3PQ09 (UniProtKB/TrEMBL),   A0A8C0YX58 (UniProtKB/TrEMBL),   A0A8I3S400 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022270670   ⟸   XM_022414962
- Peptide Label: isoform X3
- UniProtKB: A0A8C0NHH8 (UniProtKB/TrEMBL),   A0A8I3PGW9 (UniProtKB/TrEMBL),   A0A8P0NBJ7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000056229   ⟸   ENSCAFT00000069036
RefSeq Acc Id: ENSCAFP00000013832   ⟸   ENSCAFT00000014945
RefSeq Acc Id: ENSCAFP00000049332   ⟸   ENSCAFT00000073840
RefSeq Acc Id: ENSCAFP00000066190   ⟸   ENSCAFT00000091997
RefSeq Acc Id: ENSCAFP00000049644   ⟸   ENSCAFT00000072030
RefSeq Acc Id: ENSCAFP00000049651   ⟸   ENSCAFT00000079629
RefSeq Acc Id: ENSCAFP00000043346   ⟸   ENSCAFT00000090641
RefSeq Acc Id: ENSCAFP00000062446   ⟸   ENSCAFT00000075767
RefSeq Acc Id: ENSCAFP00000044572   ⟸   ENSCAFT00000071343
RefSeq Acc Id: ENSCAFP00000060101   ⟸   ENSCAFT00000071601
RefSeq Acc Id: XP_038377357   ⟸   XM_038521429
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038377350   ⟸   XM_038521422
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038377352   ⟸   XM_038521424
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038377355   ⟸   XM_038521427
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038377349   ⟸   XM_038521421
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038377360   ⟸   XM_038521432
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038377359   ⟸   XM_038521431
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038377358   ⟸   XM_038521430
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038377361   ⟸   XM_038521433
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038377362   ⟸   XM_038521434
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038377351   ⟸   XM_038521423
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038377356   ⟸   XM_038521428
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038377353   ⟸   XM_038521425
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038505471   ⟸   XM_038649543
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038505465   ⟸   XM_038649537
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038505467   ⟸   XM_038649539
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038505469   ⟸   XM_038649541
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038505464   ⟸   XM_038649536
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038505474   ⟸   XM_038649546
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038505473   ⟸   XM_038649545
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038505472   ⟸   XM_038649544
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038505475   ⟸   XM_038649547
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038505476   ⟸   XM_038649548
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038505466   ⟸   XM_038649538
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038505470   ⟸   XM_038649542
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038505468   ⟸   XM_038649540
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038303296   ⟸   XM_038447368
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SFT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038303290   ⟸   XM_038447362
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038303292   ⟸   XM_038447364
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038303294   ⟸   XM_038447366
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038303289   ⟸   XM_038447361
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038303299   ⟸   XM_038447371
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SG34 (UniProtKB/TrEMBL),   A0A8I3PQ09 (UniProtKB/TrEMBL),   A0A8C0YX58 (UniProtKB/TrEMBL),   A0A8I3S400 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038303298   ⟸   XM_038447370
- Peptide Label: isoform X4
- UniProtKB: A0A8C0NLA3 (UniProtKB/TrEMBL),   A0A8I3S833 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038303297   ⟸   XM_038447369
- Peptide Label: isoform X3
- UniProtKB: A0A8C0NHH8 (UniProtKB/TrEMBL),   A0A8I3PGW9 (UniProtKB/TrEMBL),   A0A8P0NBJ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038303300   ⟸   XM_038447372
- Peptide Label: isoform X6
- UniProtKB: A0A8I3PGW9 (UniProtKB/TrEMBL),   A0A8P0NBJ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038303301   ⟸   XM_038447373
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038303291   ⟸   XM_038447363
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038303295   ⟸   XM_038447367
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038303293   ⟸   XM_038447365
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038319802   ⟸   XM_038463874
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038319803   ⟸   XM_038463875
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038441061   ⟸   XM_038585133
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SFT3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441055   ⟸   XM_038585127
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441057   ⟸   XM_038585129
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441059   ⟸   XM_038585131
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441054   ⟸   XM_038585126
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441064   ⟸   XM_038585136
- Peptide Label: isoform X5
- UniProtKB: A0A8C0SG34 (UniProtKB/TrEMBL),   A0A8C0YX58 (UniProtKB/TrEMBL),   A0A8I3PQ09 (UniProtKB/TrEMBL),   A0A8I3S400 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441063   ⟸   XM_038585135
- Peptide Label: isoform X4
- UniProtKB: A0A8C0NLA3 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL),   A0A8I3S833 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441062   ⟸   XM_038585134
- Peptide Label: isoform X3
- UniProtKB: A0A8C0NHH8 (UniProtKB/TrEMBL),   A0A8I3PGW9 (UniProtKB/TrEMBL),   A0A8P0NBJ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441065   ⟸   XM_038585137
- Peptide Label: isoform X6
- UniProtKB: A0A8I3PGW9 (UniProtKB/TrEMBL),   A0A8P0NBJ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441066   ⟸   XM_038585138
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038441056   ⟸   XM_038585128
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441060   ⟸   XM_038585132
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038441058   ⟸   XM_038585130
- Peptide Label: isoform X1
- UniProtKB: A0A8C0NK78 (UniProtKB/TrEMBL),   A0A8C0SFT3 (UniProtKB/TrEMBL),   A0A8I3PNE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845032953   ⟸   ENSCAFT00845042016
RefSeq Acc Id: ENSCAFP00845033017   ⟸   ENSCAFT00845042097
RefSeq Acc Id: ENSCAFP00845033169   ⟸   ENSCAFT00845042313
RefSeq Acc Id: ENSCAFP00845033252   ⟸   ENSCAFT00845042414
RefSeq Acc Id: ENSCAFP00845033313   ⟸   ENSCAFT00845042501
RefSeq Acc Id: ENSCAFP00845033543   ⟸   ENSCAFT00845042791
RefSeq Acc Id: ENSCAFP00845033397   ⟸   ENSCAFT00845042598
RefSeq Acc Id: ENSCAFP00845033103   ⟸   ENSCAFT00845042212
RefSeq Acc Id: ENSCAFP00845033439   ⟸   ENSCAFT00845042645
RefSeq Acc Id: ENSCAFP00845033344   ⟸   ENSCAFT00845042536
Protein Domains
HMG box


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000009394 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030015280 UniProtKB/TrEMBL
  ENSCAFG00040012541 UniProtKB/TrEMBL
  ENSCAFG00845023737 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000014945.5 UniProtKB/TrEMBL
  ENSCAFT00000069036.2 UniProtKB/TrEMBL
  ENSCAFT00000071343.2 UniProtKB/TrEMBL
  ENSCAFT00000071601.2 UniProtKB/TrEMBL
  ENSCAFT00000072030.2 UniProtKB/TrEMBL
  ENSCAFT00000073840.2 UniProtKB/TrEMBL
  ENSCAFT00000075767.2 UniProtKB/TrEMBL
  ENSCAFT00000079629.2 UniProtKB/TrEMBL
  ENSCAFT00000090641.2 UniProtKB/TrEMBL
  ENSCAFT00000091997.2 UniProtKB/TrEMBL
  ENSCAFT00030028489.1 UniProtKB/TrEMBL
  ENSCAFT00030028589.1 UniProtKB/TrEMBL
  ENSCAFT00030028679.1 UniProtKB/TrEMBL
  ENSCAFT00030028774.1 UniProtKB/TrEMBL
  ENSCAFT00030028813.1 UniProtKB/TrEMBL
  ENSCAFT00030028910.1 UniProtKB/TrEMBL
  ENSCAFT00030028933.1 UniProtKB/TrEMBL
  ENSCAFT00030028967.1 UniProtKB/TrEMBL
  ENSCAFT00030029065.1 UniProtKB/TrEMBL
  ENSCAFT00040023439.1 UniProtKB/TrEMBL
  ENSCAFT00040023519.1 UniProtKB/TrEMBL
  ENSCAFT00040023585.1 UniProtKB/TrEMBL
  ENSCAFT00040023684.1 UniProtKB/TrEMBL
  ENSCAFT00040023751.1 UniProtKB/TrEMBL
  ENSCAFT00040023839.1 UniProtKB/TrEMBL
  ENSCAFT00040023875.1 UniProtKB/TrEMBL
  ENSCAFT00040023961.1 UniProtKB/TrEMBL
  ENSCAFT00040023996.1 UniProtKB/TrEMBL
  ENSCAFT00040024109.1 UniProtKB/TrEMBL
  ENSCAFT00845042016 ENTREZGENE
  ENSCAFT00845042016.1 UniProtKB/TrEMBL
  ENSCAFT00845042097.1 UniProtKB/TrEMBL
  ENSCAFT00845042212.1 UniProtKB/TrEMBL
  ENSCAFT00845042313 ENTREZGENE
  ENSCAFT00845042313.1 UniProtKB/TrEMBL
  ENSCAFT00845042414.1 UniProtKB/TrEMBL
  ENSCAFT00845042501.1 UniProtKB/TrEMBL
  ENSCAFT00845042536 ENTREZGENE
  ENSCAFT00845042536.1 UniProtKB/TrEMBL
  ENSCAFT00845042598.1 UniProtKB/TrEMBL
  ENSCAFT00845042645 ENTREZGENE
  ENSCAFT00845042645.1 UniProtKB/TrEMBL
  ENSCAFT00845042791 ENTREZGENE
  ENSCAFT00845042791.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.30.10 UniProtKB/TrEMBL
  3.30.230.10 UniProtKB/TrEMBL
  3.30.565.10 UniProtKB/TrEMBL
InterPro DNA_mismatch_repair_CS UniProtKB/TrEMBL
  DNA_mismatch_repair_N UniProtKB/TrEMBL
  DNA_mismatch_S5_2-like UniProtKB/TrEMBL
  HATPase_C_sf UniProtKB/TrEMBL
  HMG_box_dom UniProtKB/TrEMBL
  HMG_box_dom_sf UniProtKB/TrEMBL
  MutL/Mlh/Pms UniProtKB/TrEMBL
  Ribosomal_S5_D2-typ_fold UniProtKB/TrEMBL
  Ribosomal_S5_D2-typ_fold_subgr UniProtKB/TrEMBL
KEGG Report cfa:478840 UniProtKB/TrEMBL
NCBI Gene PMS1 ENTREZGENE
PANTHER PMS1 PROTEIN HOMOLOG 1 UniProtKB/TrEMBL
  PTHR10073 UniProtKB/TrEMBL
Pfam DNA_mis_repair UniProtKB/TrEMBL
  HATPase_c_3 UniProtKB/TrEMBL
  HMG_box UniProtKB/TrEMBL
PROSITE DNA_MISMATCH_REPAIR_1 UniProtKB/TrEMBL
  HMG_BOX_2 UniProtKB/TrEMBL
SMART DNA_mis_repair UniProtKB/TrEMBL
  HMG UniProtKB/TrEMBL
Superfamily-SCOP SSF47095 UniProtKB/TrEMBL
  SSF54211 UniProtKB/TrEMBL
  SSF55874 UniProtKB/TrEMBL
UniProt A0A8C0NCY9_CANLF UniProtKB/TrEMBL
  A0A8C0NE40_CANLF UniProtKB/TrEMBL
  A0A8C0NHH8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0NIL8_CANLF UniProtKB/TrEMBL
  A0A8C0NK78 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0NLA3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0NNG6_CANLF UniProtKB/TrEMBL
  A0A8C0SFT3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SG23_CANLF UniProtKB/TrEMBL
  A0A8C0SG34 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SGE1_CANLF UniProtKB/TrEMBL
  A0A8C0YX58 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PGW9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PKD8_CANLF UniProtKB/TrEMBL
  A0A8I3PKR3_CANLF UniProtKB/TrEMBL
  A0A8I3PKV6_CANLF UniProtKB/TrEMBL
  A0A8I3PNE6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PQ09 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PQD7_CANLF UniProtKB/TrEMBL
  A0A8I3PVI6_CANLF UniProtKB/TrEMBL
  A0A8I3S400 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S833 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NBJ7 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:44738 ENTREZGENE