CIB1 (calcium and integrin binding 1) - Rat Genome Database

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Gene: CIB1 (calcium and integrin binding 1) Canis lupus familiaris
Analyze
Symbol: CIB1
Name: calcium and integrin binding 1
RGD ID: 12182019
Description: ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN angiogenesis (inferred); apoptotic process (inferred); cell adhesion (inferred); ASSOCIATED WITH Alzheimer's disease (ortholog); Bloom syndrome (ortholog); colorectal cancer (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); neuronal cell body (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: calcium and integrin-binding protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1353,184,713 - 53,209,195 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl353,184,714 - 53,188,224 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha355,822,517 - 55,847,781 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0353,600,749 - 53,626,017 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl353,600,750 - 53,625,109 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1353,120,852 - 53,146,101 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0353,331,988 - 53,357,228 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0353,672,463 - 53,697,717 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
angiogenesis  (IEA)
apoptotic process  (IEA)
cell adhesion  (IEA)
cell differentiation  (IEA)
cell division  (IEA)
cellular response to growth factor stimulus  (IEA)
cellular response to nerve growth factor stimulus  (IEA)
cellular response to tumor necrosis factor  (IEA)
cytoplasmic microtubule organization  (IEA)
DNA damage response  (IEA)
endomitotic cell cycle  (IEA)
negative regulation of apoptotic process  (IEA)
negative regulation of cell population proliferation  (IEA)
negative regulation of megakaryocyte differentiation  (IEA)
negative regulation of microtubule depolymerization  (IEA)
negative regulation of neuron projection development  (IEA)
negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction  (IEA)
negative regulation of protein phosphorylation  (IEA)
platelet formation  (IEA)
positive regulation of calcineurin-NFAT signaling cascade  (IEA)
positive regulation of cell adhesion mediated by integrin  (IEA)
positive regulation of cell growth  (IEA)
positive regulation of cell migration  (IEA)
positive regulation of cell migration involved in sprouting angiogenesis  (IEA)
positive regulation of cell population proliferation  (IEA)
positive regulation of cell-matrix adhesion  (IEA)
positive regulation of ERK1 and ERK2 cascade  (IEA)
positive regulation of male germ cell proliferation  (IEA)
positive regulation of protein localization to plasma membrane  (IEA)
positive regulation of protein phosphorylation  (IEA)
positive regulation of protein targeting to membrane  (IEA)
positive regulation of substrate adhesion-dependent cell spreading  (IEA)
regulation of cell division  (IEA)
regulation of cell population proliferation  (IEA)
response to ischemia  (IEA)
spermatid development  (IEA)
spermatogenesis  (IEA)
thrombopoietin-mediated signaling pathway  (IEA)

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:37756605  


Genomics

Comparative Map Data
CIB1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1353,184,713 - 53,209,195 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl353,184,714 - 53,188,224 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha355,822,517 - 55,847,781 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0353,600,749 - 53,626,017 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl353,600,750 - 53,625,109 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1353,120,852 - 53,146,101 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0353,331,988 - 53,357,228 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0353,672,463 - 53,697,717 (-)NCBIUU_Cfam_GSD_1.0
CIB1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381590,229,975 - 90,265,759 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1590,229,975 - 90,234,047 (-)EnsemblGRCh38hg38GRCh38
GRCh371590,773,207 - 90,808,991 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361588,574,481 - 88,578,168 (-)NCBINCBI36Build 36hg18NCBI36
Build 341588,574,481 - 88,578,164NCBI
Celera1567,177,856 - 67,181,658 (-)NCBICelera
Cytogenetic Map15q26.1NCBI
HuRef1566,885,466 - 66,920,950 (-)NCBIHuRef
CHM1_11590,615,325 - 90,650,739 (-)NCBICHM1_1
T2T-CHM13v2.01587,985,982 - 88,021,749 (-)NCBIT2T-CHM13v2.0
Cib1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39779,876,904 - 79,882,367 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl779,876,895 - 79,882,561 (-)EnsemblGRCm39 Ensembl
GRCm38780,227,156 - 80,232,805 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl780,227,147 - 80,232,813 (-)EnsemblGRCm38mm10GRCm38
MGSCv37787,372,046 - 87,377,502 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36780,100,673 - 80,106,129 (-)NCBIMGSCv36mm8
Celera777,628,499 - 77,633,950 (-)NCBICelera
Cytogenetic Map7D2NCBI
cM Map745.55NCBI
Cib1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81143,587,591 - 143,593,153 (-)NCBIGRCr8
mRatBN7.21134,178,331 - 134,183,895 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1134,178,331 - 134,213,423 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1142,087,063 - 142,092,596 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01149,256,463 - 149,261,996 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01142,174,501 - 142,180,032 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01142,014,962 - 142,020,461 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1142,014,958 - 142,020,525 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01142,969,357 - 142,974,856 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41136,031,865 - 136,045,153 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11136,110,270 - 136,123,559 (-)NCBI
Celera1126,238,471 - 126,243,970 (-)NCBICelera
Cytogenetic Map1q31NCBI
Cib1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541615,102,632 - 15,106,372 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541615,102,632 - 15,106,372 (+)NCBIChiLan1.0ChiLan1.0
CIB1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21679,778,580 - 79,782,540 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11583,478,015 - 83,481,975 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01568,919,377 - 68,923,213 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11588,121,309 - 88,125,120 (-)NCBIpanpan1.1PanPan1.1panPan2
Cib1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640130,366,977 - 130,370,657 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648315,960,036 - 15,968,094 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648315,963,863 - 15,967,458 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CIB1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl755,794,836 - 55,798,590 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1755,794,834 - 55,798,666 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2760,656,933 - 60,659,823 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CIB1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1298,777,202 - 8,781,027 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl298,777,436 - 8,781,030 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605937,949,545 - 37,953,393 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cib1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476817,209,639 - 17,213,114 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476817,209,639 - 17,212,996 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CIB1
177 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 6 12 8 10 6
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014112435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014112436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038597183 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038597184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038597185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_844783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001315865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001315866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005323409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005357075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005391600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005424623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000019209   ⟹   ENSCAFP00000017815
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl353,184,929 - 53,188,224 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000076332   ⟹   ENSCAFP00000061186
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl353,184,714 - 53,188,185 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845002122   ⟹   ENSCAFP00845001663
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl353,600,750 - 53,625,109 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845002139   ⟹   ENSCAFP00845001681
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl353,600,750 - 53,622,207 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845002159   ⟹   ENSCAFP00845001701
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl353,600,750 - 53,604,230 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845002184   ⟹   ENSCAFP00845001724
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl353,600,965 - 53,604,269 (-)Ensembl
RefSeq Acc Id: XM_014112435   ⟹   XP_013967910
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1353,184,713 - 53,209,175 (-)NCBI
Dog10K_Boxer_Tasha355,822,517 - 55,846,925 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014112436   ⟹   XP_013967911
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1353,196,919 - 53,209,195 (-)NCBI
Dog10K_Boxer_Tasha355,834,721 - 55,847,781 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038471929   ⟹   XP_038327857
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1353,120,852 - 53,124,517 (-)NCBI
RefSeq Acc Id: XM_038471930   ⟹   XP_038327858
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1353,120,852 - 53,145,245 (-)NCBI
RefSeq Acc Id: XM_038471931   ⟹   XP_038327859
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1353,133,043 - 53,146,101 (-)NCBI
RefSeq Acc Id: XM_038532859   ⟹   XP_038388787
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0353,672,463 - 53,676,135 (-)NCBI
RefSeq Acc Id: XM_038532860   ⟹   XP_038388788
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0353,672,463 - 53,696,861 (-)NCBI
RefSeq Acc Id: XM_038532861   ⟹   XP_038388789
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0353,684,658 - 53,697,717 (-)NCBI
RefSeq Acc Id: XM_038597183   ⟹   XP_038453111
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0353,331,988 - 53,335,658 (-)NCBI
RefSeq Acc Id: XM_038597184   ⟹   XP_038453112
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0353,331,988 - 53,356,372 (-)NCBI
RefSeq Acc Id: XM_038597185   ⟹   XP_038453113
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0353,344,175 - 53,357,228 (-)NCBI
RefSeq Acc Id: XM_038661364   ⟹   XP_038517292
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0353,600,749 - 53,604,426 (-)NCBI
RefSeq Acc Id: XM_038661365   ⟹   XP_038517293
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0353,600,749 - 53,625,164 (-)NCBI
RefSeq Acc Id: XM_038661366   ⟹   XP_038517294
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0353,612,959 - 53,626,017 (-)NCBI
RefSeq Acc Id: XM_844783   ⟹   XP_849876
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1353,184,713 - 53,188,381 (-)NCBI
Dog10K_Boxer_Tasha355,822,517 - 55,826,186 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001315866
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1353,184,713 - 53,187,550 (-)NCBI
Dog10K_Boxer_Tasha355,822,517 - 55,825,355 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005323409
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1353,120,852 - 53,123,686 (-)NCBI
RefSeq Acc Id: XR_005357075
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0353,672,463 - 53,675,304 (-)NCBI
RefSeq Acc Id: XR_005391600
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0353,331,988 - 53,334,815 (-)NCBI
RefSeq Acc Id: XR_005424623
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0353,600,749 - 53,603,590 (-)NCBI
RefSeq Acc Id: XP_013967910   ⟸   XM_014112435
- Peptide Label: isoform X2
- UniProtKB: A0A8P0PLY0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_849876   ⟸   XM_844783
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RAY8 (UniProtKB/TrEMBL),   A0A8C0KXK0 (UniProtKB/TrEMBL),   A0A8P0SGY3 (UniProtKB/TrEMBL),   A0A8P0PA47 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013967911   ⟸   XM_014112436
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSCAFP00000017815   ⟸   ENSCAFT00000019209
RefSeq Acc Id: ENSCAFP00000061186   ⟸   ENSCAFT00000076332
RefSeq Acc Id: XP_038327858   ⟸   XM_038471930
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038327857   ⟸   XM_038471929
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038327859   ⟸   XM_038471931
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038453112   ⟸   XM_038597184
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038453111   ⟸   XM_038597183
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038453113   ⟸   XM_038597185
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038517293   ⟸   XM_038661365
- Peptide Label: isoform X2
- UniProtKB: A0A8I3MIC9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038517292   ⟸   XM_038661364
- Peptide Label: isoform X1
- UniProtKB: A0A8I3MYE4 (UniProtKB/TrEMBL),   A0A8I3MI42 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038517294   ⟸   XM_038661366
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038388788   ⟸   XM_038532860
- Peptide Label: isoform X2
- UniProtKB: A0A8P0PLY0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388787   ⟸   XM_038532859
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KXK0 (UniProtKB/TrEMBL),   A0A8C0RAY8 (UniProtKB/TrEMBL),   A0A8P0PA47 (UniProtKB/TrEMBL),   A0A8P0SGY3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038388789   ⟸   XM_038532861
- Peptide Label: isoform X3
RefSeq Acc Id: ENSCAFP00845001701   ⟸   ENSCAFT00845002159
RefSeq Acc Id: ENSCAFP00845001724   ⟸   ENSCAFT00845002184
RefSeq Acc Id: ENSCAFP00845001681   ⟸   ENSCAFT00845002139
RefSeq Acc Id: ENSCAFP00845001663   ⟸   ENSCAFT00845002122
Protein Domains
EF-hand

Promoters
RGD ID:13682753
Promoter ID:EPDNEW_C821
Type:multiple initiation site
Name:CIB1_1
Description:calcium and integrin binding 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1353,188,239 - 53,188,299EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000012099 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030002355 UniProtKB/TrEMBL
  ENSCAFG00040001971 UniProtKB/TrEMBL
  ENSCAFG00845001241 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000019209.5 UniProtKB/TrEMBL
  ENSCAFT00000076332.2 UniProtKB/TrEMBL
  ENSCAFT00000097518.1 UniProtKB/TrEMBL
  ENSCAFT00000106841.1 UniProtKB/TrEMBL
  ENSCAFT00030004344.1 UniProtKB/TrEMBL
  ENSCAFT00040003729.1 UniProtKB/TrEMBL
  ENSCAFT00845002122 ENTREZGENE
  ENSCAFT00845002122.1 UniProtKB/TrEMBL
  ENSCAFT00845002139.1 UniProtKB/TrEMBL
  ENSCAFT00845002159.1 UniProtKB/TrEMBL
  ENSCAFT00845002184 ENTREZGENE
  ENSCAFT00845002184.1 UniProtKB/TrEMBL
Gene3D-CATH EF-hand UniProtKB/TrEMBL
InterPro EF-hand-dom_pair UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/TrEMBL
NCBI Gene CIB1 ENTREZGENE
PANTHER CALCIUM AND INTEGRIN BINDING FAMILY MEMBER 2 UniProtKB/TrEMBL
  CALCIUM AND INTEGRIN-BINDING PROTEIN 1 UniProtKB/TrEMBL
Pfam EF-hand_7 UniProtKB/TrEMBL
PROSITE EF_HAND_1 UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/TrEMBL
SMART EFh UniProtKB/TrEMBL
Superfamily-SCOP SSF47473 UniProtKB/TrEMBL
UniProt A0A8C0KXK0 ENTREZGENE
  A0A8C0RAY8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MD73_CANLF UniProtKB/TrEMBL
  A0A8I3MI42 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MIC9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MYE4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PA47 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PFJ2_CANLF UniProtKB/TrEMBL
  A0A8P0PLY0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SGY3 ENTREZGENE
UniProt Secondary A0A8P0SGY3 UniProtKB/TrEMBL
VGNC ID VGNC:39266 ENTREZGENE