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Gene: SLC39A8 (solute carrier family 39 member 8) Canis lupus familiaris

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Symbol:

SLC39A8

Name:

solute carrier family 39 member 8

RGD ID:

12181761

Description:

ENCODES a protein that exhibits metal ion transmembrane transporter activity (inferred); monoatomic cation:bicarbonate symporter activity (inferred); zinc:bicarbonate symporter activity (inferred); INVOLVED IN arginine metabolic process (ortholog); cadmium ion transmembrane transport (ortholog); cartilage homeostasis (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH beta-mannosidosis (ortholog); congenital disorder of glycosylation type IIn (ortholog); Crohn's disease (ortholog); FOUND IN apical plasma membrane (inferred); basolateral plasma membrane (inferred); lysosomal membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

metal cation symporter ZIP8; zinc transporter ZIP8

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	32	23,727,920 - 23,801,459 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	32	23,729,476 - 23,800,941 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	32	18,223,143 - 18,296,028 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	32	23,949,019 - 24,021,586 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	32	23,949,029 - 24,022,702 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	32	23,928,002 - 24,000,562 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	32	23,708,061 - 23,781,012 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	32	16,083,043 - 16,156,566 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

beta-mannosidosis (ISO)

congenital disorder of glycosylation type IIn (ISO)

Crohn's disease (ISO)

Experimental Liver Cirrhosis (ISO)

genetic disease (ISO)

inflammatory bowel disease 1 (ISO)

left ventricular noncompaction (ISO)

Manganese Poisoning (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

arginine metabolic process (IEA,ISO)

bicarbonate transport (IEA)

cadmium ion transmembrane transport (IEA,ISO)

cartilage homeostasis (IEA,ISO)

cellular detoxification of cadmium ion (IEA)

cobalt ion transport (ISO)

DNA-templated transcription (IEA,ISO)

extracellular matrix organization (IEA,ISO)

intracellular manganese ion homeostasis (IEA)

intracellular zinc ion homeostasis (IEA)

iron ion import across plasma membrane (IEA)

leukocyte adhesion to arterial endothelial cell (IEA,ISO)

manganese ion transmembrane transport (IEA)

mercury ion transport (IEA)

metal ion transport (IEA)

mitochondrial manganese ion transmembrane transport (IEA)

negative regulation of canonical NF-kappaB signal transduction (IEA,ISO)

negative regulation of inflammatory response (IEA,ISO)

plasma membrane selenite transport (IEA)

protein N-linked glycosylation (IEA,ISO)

regulation of DNA-templated transcription (IEA,ISO)

regulation of membrane potential (IEA)

transmembrane transport (IEA)

zinc ion import across plasma membrane (IEA)

zinc ion transmembrane transport (IEA)

zinc ion transport (IEA)

Cellular Component

apical plasma membrane (IEA)

basolateral plasma membrane (IEA)

lysosomal membrane (IEA)

membrane (IEA)

organelle membrane (IEA)

plasma membrane (IEA)

Molecular Function

metal ion transmembrane transporter activity (IEA)

monoatomic cation:bicarbonate symporter activity (IEA)

zinc:bicarbonate symporter activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

iron uptake pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

SLC39A8
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	32	23,727,920 - 23,801,459 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	32	23,729,476 - 23,800,941 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	32	18,223,143 - 18,296,028 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	32	23,949,019 - 24,021,586 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	32	23,949,029 - 24,022,702 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	32	23,928,002 - 24,000,562 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	32	23,708,061 - 23,781,012 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	32	16,083,043 - 16,156,566 (+)	NCBI		UU_Cfam_GSD_1.0

SLC39A8
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	102,251,041 - 102,345,482 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	102,251,080 - 102,431,258 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	103,172,198 - 103,266,639 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	103,401,844 - 103,485,371 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	103,539,998 - 103,623,526	NCBI
Celera	4	100,470,678 - 100,565,146 (-)	NCBI		Celera
Cytogenetic Map	4	q24	NCBI
HuRef	4	98,909,550 - 99,003,934 (-)	NCBI		HuRef
CHM1_1	4	103,148,714 - 103,243,025 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	105,565,252 - 105,659,701 (-)	NCBI		T2T-CHM13v2.0

Slc39a8
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	135,522,644 - 135,594,333 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	135,531,040 - 135,594,333 (+)	Ensembl		GRCm39 Ensembl
GRCm38	3	135,816,882 - 135,888,572 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	135,825,279 - 135,888,572 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	135,488,455 - 135,551,536 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	135,763,475 - 135,825,778 (+)	NCBI		MGSCv36	mm8
Celera	3	142,245,991 - 142,312,950 (+)	NCBI		Celera
Cytogenetic Map	3	G3	NCBI
cM Map	3	63.04	NCBI

Slc39a8
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	226,845,686 - 226,992,668 (+)	NCBI		GRCr8
mRatBN7.2	2	224,171,787 - 224,319,326 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	224,256,654 - 224,319,129 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	231,982,580 - 232,044,754 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	229,882,319 - 229,944,486 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	224,746,913 - 224,809,087 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	241,028,851 - 241,092,584 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	241,029,693 - 241,092,582 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	259,584,747 - 259,648,098 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	233,340,397 - 233,403,461 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	233,327,136 - 233,390,197 (+)	NCBI
Celera	2	216,458,405 - 216,522,357 (+)	NCBI		Celera
Cytogenetic Map	2	q43	NCBI

Slc39a8
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955496	6,040,029 - 6,109,907 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955496	6,016,727 - 6,106,965 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC39A8
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	100,339,570 - 100,430,481 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	100,626,388 - 100,716,146 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	94,675,458 - 94,770,380 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	105,339,488 - 105,433,813 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	105,339,488 - 105,433,568 (-)	Ensembl	panpan1.1		panPan2

Slc39a8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405301	17,620,065 - 17,693,363 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936520	962,756 - 1,037,274 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936520	961,376 - 1,036,801 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC39A8
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	118,605,402 - 118,678,107 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	118,604,852 - 118,678,115 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	127,753,647 - 127,825,292 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC39A8
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	7	50,355,756 - 50,451,253 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	7	50,367,436 - 50,451,510 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	28,867,139 - 28,956,324 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc39a8
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624830	5,514,780 - 5,574,894 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624830	5,514,595 - 5,573,250 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SLC39A8
1051 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005639233	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005639234	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022413532	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038444249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038518646	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038582022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038646589	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000077	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000017004 ⟹ ENSCAFP00000015732

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	32	23,729,476 - 23,800,941 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845044974 ⟹ ENSCAFP00845035246

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	32	23,949,029 - 24,022,702 (-)	Ensembl

RefSeq Acc Id:

XM_005639234 ⟹ XP_005639291

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	32	23,727,920 - 23,801,459 (-)	NCBI
Dog10K_Boxer_Tasha	32	18,223,143 - 18,296,028 (+)	NCBI

Sequence:

show sequence

AGAGAGAGGGAGACAGAGTTGGAGAGAGAGAGGGAGACGAGAGCGAGCGAGCCTGAGACTCACG
TGGACACACACAGAGACGCAGAGACAGAAACAGGCAGGCGAGGCTCTCCAGGAGGCCCGGGGCC
CCGCTCCGCCTATCGCTCCCCACGCCCGGCGGCACCTGCGCTTCGATGCGCCGCAGGTCGCGGG
CTGCTGCTGTCCCGGAGGCGGCGGAGGCCCAGGGGCGCCCGCGTCGCGGCTGACCCGGACCCGC
GCCGACGCCCGAGCCGCGCGCCCTTGGGCACCGACGGCGGCGCGCCCAGAGCGTCCCGGAGCGC
TCCAGCCCGCCCCAGGCCCCCGCGAGGCGGCGCCGGCCGGCATGGCCCCGGGCCGGGCGGTGGC
CGGGCTCCTGCTGCTGGCGGCCGCGGGCGTCGGAGGCGCGGCCGCGGGCCCCGCGCTGGCCTTC
AGCGAGGATGTGCTGAGCGTGTTCGGCGCGAACCGGAGCCTGTCGGCGGCGCAGCTGGCGCACC
TGCTGGAGCAGCTGGGAGCCGCCCCCACCCACGGCGTGGCCGAGCCCGCGCGGCTGCACTTCAA
CCAGTGTCTATCAGCAGAAGAGATCTTTTCCCTTCATGGCTTTTCAAATACTACTCAGATAAGC
AGCTCCAACTTCTCTGTGATCTGTCCAGCAGTCTTACAGCAATTGAACTTTCATCCTTGTGAGG
ATCGGCACAAACACAAAACAAAACCAAGTATTTCAGAAGTTTGGGGATACGGACTCTTGTCAGT
GACAATTATTAATCTGGCATCCCTCCTCGGATTGATTTTGACTCCATTGATAAAGAAATCTTAT
TTCCCGAAGATTTTGACCTTTTTTGTTGGTCTAGCTATTGGGACTCTATTTTCAAATGCCATTT
TCCAGCTTATTCCAGAGGCATTTGGATTCAATCCCAAAAGTGACAACTATGTTGAGAAGGCAGT
TGCTGTGTTTGGTGGATTTTACATACTTTTCTTTTTTGAAAGAGTGCTTAAGATGTTATTAAAG
ACGTATGGTCAGAATGATCATACCCACTTTAGAAATGATGACTTTGGTCCTTCTCATGAGAAAA
CTCATCAACCTAAAACATTACCTGCCATCAATGGTGTGACCTGTTATGCAAATCCAGCTGTCAC
AGAGCCTAATGGACACATCCATTTTGATAATGTCAGTGTGGTATCTCTACAGGATGGAAAAATG
GAGTCAAGTTCATGTACCTGTTTGAAGGGACCCAAACTGTCCAAAATAGGGACAATTGCCTGGA
TGATAACGCTCAGTGATGCCCTCCACAATTTCATCGATGGCCTGGCGATTGGGGCTTCCTGCAC
CTTGTCTCTTCTTCAGGGACTCAGTACTTCTATAGCAATTCTGTGTGAAGAATTTCCTCATGAG
TTAGGGGACTTTGTGATCCTACTCAGTGCAGGAATGAGCACTCGGCAAGCTCTGTTATTCAATT
TCCTTTCGGCATGTTCCTGCTACGTTGGGCTAGCTTTTGGCATTTTGGTGGGCAACAATTTTGC
TCCAAATATTATATTTGCCCTTGCTGGGGGCATGTTCCTCTATATTTCTCTGGCAGATATGTTT
CCAGAGATGAACGATATGCTGAGAGAAAAGATAACTGGAAGAAAAACCGATTTTACTTACTTCA
TGATTCAGAATGCTGGAATGTTAACTGGATTCACAGCCATTCTTCTCATTACCTTGTATGCAGG
AGAAATTGAATTGGAGTAACAGCAAATGAAAGATGGTGTTTTTAATGAAGGCATTTAATAAATA
AAAACATCTCCAAAGGGATTTTTAAGCTGATCCTATTTAGTTAAAAGATAATTTTATTTTCAAC
TGTAGGTCAAGAAAACTGATTATTGGTTTTAGATCTGTGAAGTAAGCCATTGTTTGTTGTTAAA
AATGCTTCAAAGGGTTTTCAGTTCCAGTCTGAGAAAGGCTGGTATAGGAGATCTTTGGTCAATA
CCCACTTCTTCATGTGTCATGCATTCTACAATCATTTAGACACCCAGACCCAGAGATGAATACA
ACCTTTGTATTGCCTTTAAACCTATTGTATAAGCCTTTAAACCTCTGTGGCAGGCTCAAAAGCT
CAGGCAGTTTCAGAGTGGTTTTCTTTTGGCCAATTTGTTCCAGTGCTTTCATTAACATGTGGAA
GAGAATCGACATGCATATAACACAGATATAAATGATTCCAAGGCCTTAATGAGCCTAGGGAAGA
AAGATTGCTCACAGCTTTTCTTTGTTTTATATACCAGTTAGAGACCTGCAGGATTGTTTTAAAA
CCCATCCTAAAATAATATGAATTCTGAAACCAGTAAAATTTTGTTAGCCCTACTAAGTTCAGAC
TTGGTCTCACACTTCATCTCTAAGTGGGAGCTCTAGTGGATCCTGCACAAATCCAGAATTGCTT
TTTTTATGACTTAGGTTGTAATTATACCATAACACCTGGGCCGCTCGGCTTCAGAATACCATGT
GTCTGCCTATGAAGGGAAAGACTCCGTGGGTTTGGAGAAAGAAAATGAATGTAATTTTAAGCAA
TTTACTTTTAAAAATAAACACGATTATTTAGCAGAGGATGTTTTAAATAAATGCAAAATAACAG
ATGGACTGCTATATCAAGGGCTGATTAACTAGAAGACACATTGCTTATGGGTGATTGAGAGCAA
TCAGAAAAGACTTCTGTGTTCAATCTACATTTTTCCTGTATGGCATACCTTGAAAAAATTTCCA
CGTACCATGGTTATGTCTGTACCTATTTTAGGTGATAGGGCCTGTTTGCTCCGTTAGCAGCTAT
AGAAAGTTGGTCTGCAATTAAACATCCTAACCCCAATTCACACTCCCACGTCACTTCAGGAGAG
ATGATTGACAGTGAGGAAAGTGATGGATAAAGGGCAACAATGATCTCAGGAATCCCATTTGCTC
ACAGACCATACAGTGGTGTCACACAGCAATAATGCAGATTAGATCAATATTTAACATATCTGTT
AATGTAGATTTCACTTTATGACTGACAATTTAAAAAAAAAAATCTTCTTTGACCAAATAGTAAA
CACCGTTGAAGCCATCCATTGTCTCCTTCGTTGTTCATTTTAATATGTATCTTTTTGAGTGACT
TCCAGGTATTTGGCATTACAGGGAGAGAGATAAGTAGGAAATTGGTGATGTGTTTATTGCAAAG
ATATTCAGCAAAATAAATACTGTAAAGATTAATCAGTAAACATAGAATCTATTTTTATCATCTA
ATCTTTTTACATTCAGTCTTAAGAAATAATCTTTACCTTTTTAAAGCACAGATTGTATGTCTGA
GTTAAGAAACTATTTACGTGATATTAAAACAAGATAGTTTAACAAAC

hide sequence

RefSeq Acc Id:

XM_038444249 ⟹ XP_038300177

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	32	23,949,019 - 24,021,586 (-)	NCBI

RefSeq Acc Id:

XM_038518646 ⟹ XP_038374574

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	32	23,928,002 - 24,000,562 (-)	NCBI

RefSeq Acc Id:

XM_038582022 ⟹ XP_038437950

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	32	16,083,043 - 16,156,566 (+)	NCBI

RefSeq Acc Id:

XM_038646589 ⟹ XP_038502517

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	32	23,708,061 - 23,781,012 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005639291	(Get FASTA)	NCBI Sequence Viewer
	XP_038300177	(Get FASTA)	NCBI Sequence Viewer
	XP_038374574	(Get FASTA)	NCBI Sequence Viewer
	XP_038437950	(Get FASTA)	NCBI Sequence Viewer
	XP_038502517	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000015732.3
	ENSCAFP00030033453.1
	ENSCAFP00040037127.1
	ENSCAFP00845035246.1

RefSeq Acc Id:

XP_005639291 ⟸ XM_005639234

- UniProtKB:

A0A8C0P5E2 (UniProtKB/TrEMBL), A0A8C0JQA0 (UniProtKB/TrEMBL), A0A8P0SFM6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAPGRAVAGLLLLAAAGVGGAAAGPALAFSEDVLSVFGANRSLSAAQLAHLLEQLGAAPTHGVA
EPARLHFNQCLSAEEIFSLHGFSNTTQISSSNFSVICPAVLQQLNFHPCEDRHKHKTKPSISEV
WGYGLLSVTIINLASLLGLILTPLIKKSYFPKILTFFVGLAIGTLFSNAIFQLIPEAFGFNPKS
DNYVEKAVAVFGGFYILFFFERVLKMLLKTYGQNDHTHFRNDDFGPSHEKTHQPKTLPAINGVT
CYANPAVTEPNGHIHFDNVSVVSLQDGKMESSSCTCLKGPKLSKIGTIAWMITLSDALHNFIDG
LAIGASCTLSLLQGLSTSIAILCEEFPHELGDFVILLSAGMSTRQALLFNFLSACSCYVGLAFG
ILVGNNFAPNIIFALAGGMFLYISLADMFPEMNDMLREKITGRKTDFTYFMIQNAGMLTGFTAI
LLITLYAGEIELE

hide sequence

Ensembl Acc Id:

ENSCAFP00000015732 ⟸ ENSCAFT00000017004

RefSeq Acc Id:

XP_038374574 ⟸ XM_038518646

RefSeq Acc Id:

XP_038502517 ⟸ XM_038646589

RefSeq Acc Id:	XP_038300177 ⟸ XM_038444249
- UniProtKB:	A0A8C0P5E2 (UniProtKB/TrEMBL), A0A8C0JQA0 (UniProtKB/TrEMBL), A0A8P0SFM6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038437950 ⟸ XM_038582022
- UniProtKB:	A0A8C0JQA0 (UniProtKB/TrEMBL), A0A8C0P5E2 (UniProtKB/TrEMBL), A0A8P0SFM6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845035246 ⟸ ENSCAFT00845044974

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000010689	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030020901	UniProtKB/TrEMBL
	ENSCAFG00040022885	UniProtKB/TrEMBL
	ENSCAFG00845025480	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000017004.5	UniProtKB/TrEMBL
	ENSCAFT00030038349.1	UniProtKB/TrEMBL
	ENSCAFT00040042558.1	UniProtKB/TrEMBL
	ENSCAFT00845044974.1	UniProtKB/TrEMBL
InterPro	ZIP	UniProtKB/TrEMBL
	ZIP_Transporter	UniProtKB/TrEMBL
KEGG Report	cfa:478494	UniProtKB/TrEMBL
NCBI Gene	SLC39A8	ENTREZGENE
PANTHER	METAL CATION SYMPORTER ZIP8	UniProtKB/TrEMBL
	SOLUTE CARRIER FAMILY 39	UniProtKB/TrEMBL
Pfam	Zip	UniProtKB/TrEMBL
UniProt	A0A8C0JQA0	ENTREZGENE
	A0A8C0P5E2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3S9E3_CANLF	UniProtKB/TrEMBL
	A0A8P0SFM6	ENTREZGENE
UniProt Secondary	A0A8P0SFM6	UniProtKB/TrEMBL
VGNC ID	VGNC:46407	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - MGI

Imported Disease Annotations - OMIM

RGD Manual Annotations