AAMDC (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 21 | 20,931,438 - 20,968,420 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 21 | 20,898,398 - 20,967,911 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 21 | 20,823,768 - 20,860,748 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 21 | 21,130,165 - 21,167,387 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 21 | 21,097,153 - 21,166,873 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 21 | 20,906,650 - 20,943,632 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 21 | 21,121,568 - 21,159,841 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 21 | 21,046,461 - 21,083,451 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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AAMDC (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 11 | 77,821,144 - 77,906,024 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 11 | 77,821,109 - 77,918,432 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 11 | 77,532,190 - 77,617,070 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 11 | 77,209,856 - 77,261,046 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 11 | 74,840,499 - 74,891,881 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | q14.1 | NCBI | | | | | HuRef | 11 | 73,830,417 - 73,881,401 (+) | NCBI | | HuRef | | | CHM1_1 | 11 | 77,415,222 - 77,466,597 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 11 | 77,754,365 - 77,839,260 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Aamdc (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 7 | 97,199,538 - 97,228,723 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 7 | 97,199,538 - 97,228,704 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 7 | 97,550,329 - 97,579,557 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 7 | 97,550,331 - 97,579,497 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 7 | 104,698,841 - 104,728,007 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 7 | 97,425,532 - 97,454,607 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 7 | 97,865,538 - 97,897,586 (-) | NCBI | | Celera | | | Cytogenetic Map | 7 | E1 | NCBI | | | | | cM Map | 7 | 53.54 | NCBI | | | | |
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Aamdc (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 161,273,205 - 161,303,253 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 151,861,990 - 151,893,621 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 151,845,255 - 151,892,398 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 159,849,903 - 159,880,199 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 167,030,069 - 167,060,371 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 159,903,573 - 159,933,862 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 162,519,513 - 162,549,211 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 162,519,521 - 162,533,893 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 168,726,362 - 168,755,990 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 154,786,525 - 154,817,248 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 1 | 149,960,470 - 149,989,795 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | q32 | NCBI | | | | |
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Aamdc (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955414 | 14,058,445 - 14,085,652 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955414 | 14,058,445 - 14,085,652 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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AAMDC (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 9 | 78,753,779 - 78,805,085 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 11 | 79,802,064 - 79,853,364 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 11 | 72,885,166 - 72,936,482 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 11 | 76,525,129 - 76,605,124 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 11 | 76,525,145 - 76,621,992 (+) | Ensembl | panpan1.1 | | panPan2 | |
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Aamdc (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 64,831,285 - 64,864,192 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936498 | 6,432,443 - 6,463,795 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936498 | 6,432,416 - 6,463,795 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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AAMDC (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 9 | 12,278,570 - 12,305,436 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 9 | 12,278,527 - 12,305,217 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 9 | 13,640,859 - 13,643,448 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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AAMDC (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 1 | 69,029,713 - 69,082,976 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 1 | 69,030,106 - 69,083,485 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666043 | 56,688,664 - 56,740,927 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Aamdc (Heterocephalus glaber - naked mole-rat) |
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