SLAMF6 (SLAM family member 6) - Rat Genome Database

Name: SLAMF6
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: SLAMF6 (SLAM family member 6) Canis lupus familiaris

Analyze

Symbol:

SLAMF6

Name:

SLAM family member 6

RGD ID:

12181006

Description:

INVOLVED IN natural killer cell differentiation (ortholog); natural killer cell proliferation (ortholog); positive regulation of interleukin-17 production (ortholog); ASSOCIATED WITH autoimmune interstitial lung, joint, and kidney disease (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN plasma membrane (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLAMF6 (SLAM family member 6)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Slamf6 (SLAM family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Slamf6 (SLAM family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slamf6 (SLAM family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLAMF6 (SLAM family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slamf6 (SLAM family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLAMF6 (SLAM family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLAMF6 (SLAM family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slamf6 (SLAM family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	21,742,228 - 21,769,521 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	21,742,301 - 21,764,494 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	21,816,924 - 21,844,184 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	21,859,417 - 21,886,676 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	38	21,746,431 - 21,774,320 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	22,160,475 - 22,187,731 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	22,570,244 - 22,597,519 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autoimmune interstitial lung, joint, and kidney disease (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

parathyroid carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

natural killer cell differentiation (ISO)

natural killer cell proliferation (ISO)

positive regulation of interleukin-17 production (ISO)

positive regulation of natural killer cell mediated cytotoxicity (ISO)

positive regulation of type II interferon production (IEA)

T cell activation (IEA)

T-helper 17 cell lineage commitment (IEA)

Cellular Component

external side of plasma membrane (IEA)

membrane (IEA)

plasma membrane (ISO)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

SLAMF6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	21,742,228 - 21,769,521 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	21,742,301 - 21,764,494 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	21,816,924 - 21,844,184 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	21,859,417 - 21,886,676 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	38	21,746,431 - 21,774,320 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	22,160,475 - 22,187,731 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	22,570,244 - 22,597,519 (+)	NCBI		UU_Cfam_GSD_1.0

SLAMF6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	160,485,036 - 160,523,255 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	160,485,030 - 160,523,262 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	160,454,826 - 160,493,045 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	158,721,444 - 158,759,666 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	157,267,892 - 157,306,115	NCBI
Celera	1	133,523,548 - 133,561,781 (-)	NCBI		Celera
Cytogenetic Map	1	q23.2-q23.3	NCBI
HuRef	1	131,811,030 - 131,849,265 (-)	NCBI		HuRef
CHM1_1	1	161,850,201 - 161,888,416 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	159,622,119 - 159,660,340 (-)	NCBI		T2T-CHM13v2.0

Slamf6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	171,745,002 - 171,776,525 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	171,745,082 - 171,780,737 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	171,917,458 - 171,948,958 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	171,917,515 - 171,953,170 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	173,847,668 - 173,873,999 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	173,754,212 - 173,780,543 (+)	NCBI		MGSCv36	mm8
Celera	1	174,769,000 - 174,795,180 (+)	NCBI		Celera
Cytogenetic Map	1	H3	NCBI
cM Map	1	79.54	NCBI

Slamf6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	86,916,956 - 86,937,697 (+)	NCBI		GRCr8
mRatBN7.2	13	84,384,561 - 84,405,300 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	84,383,742 - 84,405,300 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	86,887,900 - 86,908,642 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	88,288,179 - 88,308,918 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	85,473,001 - 85,493,730 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	90,300,160 - 90,321,781 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	90,301,006 - 90,322,457 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	94,823,716 - 94,844,891 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	87,883,459 - 87,904,207 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	13	83,996,895 - 84,017,638 (+)	NCBI		Celera
Cytogenetic Map	13	q24	NCBI

Slamf6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955468	12,233,629 - 12,264,502 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLAMF6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	89,327,888 - 89,367,231 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	89,055,259 - 89,107,209 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	135,838,862 - 135,878,207 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	139,761,121 - 139,799,348 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	139,761,121 - 139,799,348 (-)	Ensembl	panpan1.1		panPan2

Slamf6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	6,587,657 - 6,598,479 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936740	155,268 - 165,536 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLAMF6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	89,980,786 - 90,003,645 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	89,980,592 - 90,004,222 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	97,870,913 - 97,893,024 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLAMF6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	3,426,868 - 3,465,553 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	3,453,370 - 3,463,901 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	2,483,320 - 2,522,363 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slamf6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624794	754,530 - 796,732 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SLAMF6
468 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	2				6
Low	3		17	6		6	5		11		10
Below cutoff		5	5				1	6	1	8		6

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005640886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005640887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005640888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005640889	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005640890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005640891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005640892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014111295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014111296	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022415342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448667	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448668	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448669	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448670	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448673	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038464063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038464064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038464065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522553	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522555	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522556	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522558	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522559	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586332	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586333	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586334	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586336	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586337	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586338	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586339	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650752	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650753	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650755	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650756	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650758	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650759	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002623818	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002623819	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000087	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000036617 ⟹ ENSCAFP00000032020

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	38	21,742,301 - 21,764,494 (+)	Ensembl

RefSeq Acc Id:

XM_005640889 ⟹ XP_005640946

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	21,742,228 - 21,769,521 (+)	NCBI
Dog10K_Boxer_Tasha	38	21,816,924 - 21,844,184 (+)	NCBI

Sequence:

show sequence

TTCCAGTCTGTGACAGGCGGTGCAGGCAGCCCGGGCCAGCCGAGCCCCCGCAGCAGCCTGGGCG
GCTGACAGCATGCTCTGGGTGCTCCTGCTGCTCCCACTGCTCCTCCTCCTCCGGCCAGGGAACA
CAGCTTCACAAGACAGCTCAAACCCACAGACGATGAATGGGATTCTGGGAGAGTCGGTAACTCT
TTCCCCGAAGCTTCCTGTAGGGGAAGATATTCAGTCCATCACCTGGATTCACAGAGGAAGATCT
CTCATCATCATAATGCCAAAAGTTGAACAGTTCTTAGTGACTGATCCAAAATGGAAACATCGAC
TGCAATCCTTGGGGAACTACTCCTTACGACTCAGCAACCTGACAATGGAAGACGCAGGACTTTA
CTGTGCCCAGATAACCATACCAACATCTTCAGAGCTTTCCTGTTATACTCTGAAGATCTTCAGA
CGACTGAGTGTCTTAAATATTACTGTGCACCCTGGGCTGTCCAAGACCGGGACCTGCGAGGTCC
ACCTGGCCTGCTCTGTGGAGAACTCACATGACGCTCTATTAAAGTGGCACGGAGCAGGGAACAC
GTCTATATATGAAGCCAACCTCACCATCTCCTGGGACCCCAGGAATCCCAGTGAACAAAAGTAC
ACTTGTGTGGCTGAAAATATTGTCAGCAGCACATCCTCCTCTGTCTCCATCCAGAGTCTCTGCA
AAGGTAACAGTCTGTCTCAGGTCCCTCTGGGAGCCTTGAGCAGCTGTGGGGTGTGGCGTGTCCT
TCCTGCCCAAGGTTTTTTGAATCAGAAAAATCAACATCTTGATACCATATGGATTATAGTTGTG
GCTATTTTGATGTTTACAGTCATCCTTGTGGGATTATTTGTTTGGAGGAAAAAAGGTTGTTTGT
GTAGGACAGGCATCTTTCATTTCTCTACTCAGCAAACCCAGAGTGCTGCAGCGACCATAAGGAA
CTTAGATTATGTCTCCTTCTCTCCAGGGAACACCATGTATGCTTGTGTCACTCATCCAAACAGG
CAAACGAATACCCCAACACCTGGACAAAGTGGTGGTCTCTCCACCATTTACTCCACAGTTCATC
AGTCCAAAGAGAGTAAAACTATTCATTCAGGGAAAGCTCCCCTTGACAACATCATCTAAATTGC
TGAGAGGTCTCGAAAGGAACTGAGGAATGACGCAGCTTCTCCTGATCCCAGGGGAGAGAACACA
GCTTGGTTTCTGGCTGTCAACAAAATTCGAATATTTAGGATTATCTCTTCCAATTCCTCTGACC
AGAACCTGCTCAAGTACATCAAACATCTAAGGAATAACATCATTTCCAGAGTGTGATCCAAATT
ACATCTCCTAATCTGCTCCAGGGCAAAACATGCTTCCATAAACAAGTCTGGACATTGACTTTCT
CCTTGGCAACTGATGGAAATGTGCTTGACAGAGAGTTATAATTTAGAGGACAACCACTCCTCTC
CTTTTACGAAGCAGCAGGATTGTGATTCACTAGGAGAGAGCACAGCGTGTTGGTTACCTAGGTT
GTCTCTGGAATTGGATGGGCCTGTTCCCAAATCTTCACGTGTCATTTACTAGACATACCTCCTG
GGACATGTTCTGGAACCTCCTGAGCTCTGGTCTCCTAACCTGGAAAATGGGAATCCGCCTGGTA
CTCAAACCAGGAACCGCAGTTAGCCCTTACATCAGCTGTTCTATCAGCACACCCTTTGGACTCT
ACCTCCAAATATATATCTTAGACCAAACCACTTCTCTCCAAACCTTTAACCTCCACCCCATATC
AACCCACCATCATCTCCAACCCAAATACTACAGTAAGCTCAAAACAGATTTCCCCAGTTTTTGC
TCTTACTTCCCTTTGATCCTCTCTCTACGAGACAGCCAGAGTTATGTTTTTAATATAAATCAGA
TCCTTCACTTGTCTACTTAAAACTGACCCTGCAAGACTTGCCAGGCACTTAGAAAGAACTGAGT
CTCCATGGCTCTGGGTGGCCCATCTGCAGCCTCAGCTTTCAAGCTCTCCCCACATCCCCCTCTC
TGATCTGGCTTCTCTGATTCTCTTTCAGCCCCTCCAGCAGAGGAGATAGTTTACTCACATCTGC
CTCAAGACCCTTCTTTGCCTGCCTGGCTCCTTCTTACTCTACAGGTCTCAGTGCATATATGTCA
ACCTCCAAGAAAGACCTCAGACCACTGTCACTGAAGTGGATGCCCGTTTCTCTGCTACATCTTC
CATGTCGTCTATCTTATGCCATTAAATATTTATTTTTATTTAATGTCTGTTTCTCCTACTCTAC
TGTATGTGCTCCGGGAGCAAGGACCGTGACGATTTTATCCTTGTAGCCTGAGCACCTAGCACAG
TATCCAGCACATAGAAAATGTTCAACGAATACTTTTTTAATAAATAAAGCAATATGTGCTGCAG
TTTTGTGGGAATTAAAGACAACGTGCTTACAGCCCTCTGTGTGGTGCTTAGCGCATGAAAGAGC
TCGATAAACGTGAGCATCACTGTT

hide sequence

RefSeq Acc Id:

XM_005640890 ⟹ XP_005640947

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	21,742,228 - 21,769,521 (+)	NCBI
Dog10K_Boxer_Tasha	38	21,816,924 - 21,844,184 (+)	NCBI

Sequence:

show sequence

TTCCAGTCTGTGACAGGCGGTGCAGGCAGCCCGGGCCAGCCGAGCCCCCGCAGCAGCCTGGGCG
GCTGACAGCATGCTCTGGGTGCTCCTGCTGCTCCCACTGCTCCTCCTCCTCCGGCCAGGGAACA
CAGCTTCACAAGACAGCTCAAACCCACAGACGATGAATGGGATTCTGGGAGAGTCGGTAACTCT
TTCCCCGAAGCTTCCTGTAGGGGAAGATATTCAGTCCATCACCTGGATTCACAGAGGAAGATCT
CTCATCATCATAATGCCAAAAGTTGAACAGTTCTTAGTGACTGATCCAAAATGGAAACATCGAC
TGCAATCCTTGGGGAACTACTCCTTACGACTCAGCAACCTGACAATGGAAGACGCAGGACTTTA
CTGTGCCCAGATAACCATACCAACATCTTCAGAGCTTTCCTGTTATACTCTGAAGATCTTCAGA
CGACTGAGTGTCTTAAATATTACTGTGCACCCTGGGCTGTCCAAGACCGGGACCTGCGAGGTCC
ACCTGGCCTGCTCTGTGGAGAACTCACATGACGCTCTATTAAAGTGGCACGGAGCAGGGAACAC
GTCTATATATGAAGCCAACCTCACCATCTCCTGGGACCCCAGGAATCCCAGTGAACAAAAGTAC
ACTTGTGTGGCTGAAAATATTGTCAGCAGCACATCCTCCTCTGTCTCCATCCAGAGTCTCTGCA
AAGGTAACAGTCTGTCTCAGGTCCCTCTGGGAGCCTTGAGCAGCTGTGGGGTGTGGCGTGTCCT
TCCTGCCCAAGGTTTTTTGAATCAGAAAAATCAACATCTTGATACCATATGGATTATAGTTGTG
GCTATTTTGATGTTTACAGTCATCCTTGTGGGATTATTTGTTTGGAGGAAAAAAGGCATCTTTC
ATTTCTCTACTCAGCAAACCCAGAGTGCTGCAGCGACCATAAGGAACTTAGATTATGTCTCCTT
CTCTCCAGGGAACACCATGTATGCTTGTGTCACTCATCCAAACAGGCAAACGAATACCCCAACA
CCTGGACAAAGTGGTGGTCTCTCCACCATTTACTCCACAGTTCATCAGTCCAAAGAGAGTAAAA
CTATTCATTCAGGGAAAGCTCCCCTTGACAACATCATCTAAATTGCTGAGAGGTCTCGAAAGGA
ACTGAGGAATGACGCAGCTTCTCCTGATCCCAGGGGAGAGAACACAGCTTGGTTTCTGGCTGTC
AACAAAATTCGAATATTTAGGATTATCTCTTCCAATTCCTCTGACCAGAACCTGCTCAAGTACA
TCAAACATCTAAGGAATAACATCATTTCCAGAGTGTGATCCAAATTACATCTCCTAATCTGCTC
CAGGGCAAAACATGCTTCCATAAACAAGTCTGGACATTGACTTTCTCCTTGGCAACTGATGGAA
ATGTGCTTGACAGAGAGTTATAATTTAGAGGACAACCACTCCTCTCCTTTTACGAAGCAGCAGG
ATTGTGATTCACTAGGAGAGAGCACAGCGTGTTGGTTACCTAGGTTGTCTCTGGAATTGGATGG
GCCTGTTCCCAAATCTTCACGTGTCATTTACTAGACATACCTCCTGGGACATGTTCTGGAACCT
CCTGAGCTCTGGTCTCCTAACCTGGAAAATGGGAATCCGCCTGGTACTCAAACCAGGAACCGCA
GTTAGCCCTTACATCAGCTGTTCTATCAGCACACCCTTTGGACTCTACCTCCAAATATATATCT
TAGACCAAACCACTTCTCTCCAAACCTTTAACCTCCACCCCATATCAACCCACCATCATCTCCA
ACCCAAATACTACAGTAAGCTCAAAACAGATTTCCCCAGTTTTTGCTCTTACTTCCCTTTGATC
CTCTCTCTACGAGACAGCCAGAGTTATGTTTTTAATATAAATCAGATCCTTCACTTGTCTACTT
AAAACTGACCCTGCAAGACTTGCCAGGCACTTAGAAAGAACTGAGTCTCCATGGCTCTGGGTGG
CCCATCTGCAGCCTCAGCTTTCAAGCTCTCCCCACATCCCCCTCTCTGATCTGGCTTCTCTGAT
TCTCTTTCAGCCCCTCCAGCAGAGGAGATAGTTTACTCACATCTGCCTCAAGACCCTTCTTTGC
CTGCCTGGCTCCTTCTTACTCTACAGGTCTCAGTGCATATATGTCAACCTCCAAGAAAGACCTC
AGACCACTGTCACTGAAGTGGATGCCCGTTTCTCTGCTACATCTTCCATGTCGTCTATCTTATG
CCATTAAATATTTATTTTTATTTAATGTCTGTTTCTCCTACTCTACTGTATGTGCTCCGGGAGC
AAGGACCGTGACGATTTTATCCTTGTAGCCTGAGCACCTAGCACAGTATCCAGCACATAGAAAA
TGTTCAACGAATACTTTTTTAATAAATAAAGCAATATGTGCTGCAGTTTTGTGGGAATTAAAGA
CAACGTGCTTACAGCCCTCTGTGTGGTGCTTAGCGCATGAAAGAGCTCGATAAACGTGAGCATC
ACTGTT

hide sequence

RefSeq Acc Id:

XM_005640891 ⟹ XP_005640948

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	21,742,228 - 21,769,521 (+)	NCBI
Dog10K_Boxer_Tasha	38	21,816,924 - 21,844,184 (+)	NCBI

Sequence:

show sequence

TTCCAGTCTGTGACAGGCGGTGCAGGCAGCCCGGGCCAGCCGAGCCCCCGCAGCAGCCTGGGCG
GCTGACAGCATGCTCTGGGTGCTCCTGCTGCTCCCACTGCTCCTCCTCCTCCGGCCAGGGAACA
CAGCTTCACAAGACAGCTCAAACCCACAGACGATGAATGGGATTCTGGGAGAGTCGGTAACTCT
TTCCCCGAAGCTTCCTGTAGGGGAAGATATTCAGTCCATCACCTGGATTCACAGAGGAAGATCT
CTCATCATCATAATGCCAAAAGTTGAACAGTTCTTAGTGACTGATCCAAAATGGAAACATCGAC
TGCAATCCTTGGGGAACTACTCCTTACGACTCAGCAACCTGACAATGGAAGACGCAGGACTTTA
CTGTGCCCAGATAACCATACCAACATCTTCAGAGCTTTCCTGTTATACTCTGAAGATCTTCAGA
CGACTGAGTGTCTTAAATATTACTGTGCACCCTGGGCTGTCCAAGACCGGGACCTGCGAGGTCC
ACCTGGCCTGCTCTGTGGAGAACTCACATGACGCTCTATTAAAGTGGCACGGAGCAGGGAACAC
GTCTATATATGAAGCCAACCTCACCATCTCCTGGGACCCCAGGAATCCCAGTGAACAAAAGTAC
ACTTGTGTGGCTGAAAATATTGTCAGCAGCACATCCTCCTCTGTCTCCATCCAGAGTCTCTGCA
AAGGTAACAGTCTGTCTCAGGTCCCTCTGGGAGCCTTGAGCAGCTGTGGGGTGTGGCGTGTCCT
TCCTGCCCAAGGTTTTTTGAATCAGAAAAATCAACATCTTGATACCATATGGATTATAGTTGTG
GCTATTTTGATGTTTACAGTCATCCTTGTGGGATTATTTGTTTGGAGGAAAAAAGGTTGTTTGT
GTAGGACAGGCATCTTTCATTTCTCTACTCAGCAAACCCAGAGTGCTGGGAACACCATGTATGC
TTGTGTCACTCATCCAAACAGGCAAACGAATACCCCAACACCTGGACAAAGTGGTGGTCTCTCC
ACCATTTACTCCACAGTTCATCAGTCCAAAGAGAGTAAAACTATTCATTCAGGGAAAGCTCCCC
TTGACAACATCATCTAAATTGCTGAGAGGTCTCGAAAGGAACTGAGGAATGACGCAGCTTCTCC
TGATCCCAGGGGAGAGAACACAGCTTGGTTTCTGGCTGTCAACAAAATTCGAATATTTAGGATT
ATCTCTTCCAATTCCTCTGACCAGAACCTGCTCAAGTACATCAAACATCTAAGGAATAACATCA
TTTCCAGAGTGTGATCCAAATTACATCTCCTAATCTGCTCCAGGGCAAAACATGCTTCCATAAA
CAAGTCTGGACATTGACTTTCTCCTTGGCAACTGATGGAAATGTGCTTGACAGAGAGTTATAAT
TTAGAGGACAACCACTCCTCTCCTTTTACGAAGCAGCAGGATTGTGATTCACTAGGAGAGAGCA
CAGCGTGTTGGTTACCTAGGTTGTCTCTGGAATTGGATGGGCCTGTTCCCAAATCTTCACGTGT
CATTTACTAGACATACCTCCTGGGACATGTTCTGGAACCTCCTGAGCTCTGGTCTCCTAACCTG
GAAAATGGGAATCCGCCTGGTACTCAAACCAGGAACCGCAGTTAGCCCTTACATCAGCTGTTCT
ATCAGCACACCCTTTGGACTCTACCTCCAAATATATATCTTAGACCAAACCACTTCTCTCCAAA
CCTTTAACCTCCACCCCATATCAACCCACCATCATCTCCAACCCAAATACTACAGTAAGCTCAA
AACAGATTTCCCCAGTTTTTGCTCTTACTTCCCTTTGATCCTCTCTCTACGAGACAGCCAGAGT
TATGTTTTTAATATAAATCAGATCCTTCACTTGTCTACTTAAAACTGACCCTGCAAGACTTGCC
AGGCACTTAGAAAGAACTGAGTCTCCATGGCTCTGGGTGGCCCATCTGCAGCCTCAGCTTTCAA
GCTCTCCCCACATCCCCCTCTCTGATCTGGCTTCTCTGATTCTCTTTCAGCCCCTCCAGCAGAG
GAGATAGTTTACTCACATCTGCCTCAAGACCCTTCTTTGCCTGCCTGGCTCCTTCTTACTCTAC
AGGTCTCAGTGCATATATGTCAACCTCCAAGAAAGACCTCAGACCACTGTCACTGAAGTGGATG
CCCGTTTCTCTGCTACATCTTCCATGTCGTCTATCTTATGCCATTAAATATTTATTTTTATTTA
ATGTCTGTTTCTCCTACTCTACTGTATGTGCTCCGGGAGCAAGGACCGTGACGATTTTATCCTT
GTAGCCTGAGCACCTAGCACAGTATCCAGCACATAGAAAATGTTCAACGAATACTTTTTTAATA
AATAAAGCAATATGTGCTGCAGTTTTGTGGGAATTAAAGACAACGTGCTTACAGCCCTCTGTGT
GGTGCTTAGCGCATGAAAGAGCTCGATAAACGTGAGCATCACTGTT

hide sequence

RefSeq Acc Id:

XM_005640892 ⟹ XP_005640949

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	21,742,228 - 21,769,521 (+)	NCBI
Dog10K_Boxer_Tasha	38	21,816,924 - 21,844,184 (+)	NCBI

Sequence:

show sequence

TTCCAGTCTGTGACAGGCGGTGCAGGCAGCCCGGGCCAGCCGAGCCCCCGCAGCAGCCTGGGCG
GCTGACAGCATGCTCTGGGTGCTCCTGCTGCTCCCACTGCTCCTCCTCCTCCGGCCAGGGAACA
CAGCTTCACAAGACAGCTCAAACCCACAGACGATGAATGGGATTCTGGGAGAGTCGGTAACTCT
TTCCCCGAAGCTTCCTGTAGGGGAAGATATTCAGTCCATCACCTGGATTCACAGAGGAAGATCT
CTCATCATCATAATGCCAAAAGTTGAACAGTTCTTAGTGACTGATCCAAAATGGAAACATCGAC
TGCAATCCTTGGGGAACTACTCCTTACGACTCAGCAACCTGACAATGGAAGACGCAGGACTTTA
CTGTGCCCAGATAACCATACCAACATCTTCAGAGCTTTCCTGTTATACTCTGAAGATCTTCAGA
CGACTGAGTGTCTTAAATATTACTGTGCACCCTGGGCTGTCCAAGACCGGGACCTGCGAGGTCC
ACCTGGCCTGCTCTGTGGAGAACTCACATGACGCTCTATTAAAGTGGCACGGAGCAGGGAACAC
GTCTATATATGAAGCCAACCTCACCATCTCCTGGGACCCCAGGAATCCCAGTGAACAAAAGTAC
ACTTGTGTGGCTGAAAATATTGTCAGCAGCACATCCTCCTCTGTCTCCATCCAGAGTCTCTGCA
AAGGTAACAGTCTGTCTCAGGTCCCTCTGGGAGCCTTGAGCAGCTGTGGGGTGTGGCGTGTCCT
TCCTGCCCAAGGTTTTTTGAATCAGAAAAATCAACATCTTGATACCATATGGATTATAGTTGTG
GCTATTTTGATGTTTACAGTCATCCTTGTGGGATTATTTGTTTGGAGGAAAAAAGGCATCTTTC
ATTTCTCTACTCAGCAAACCCAGAGTGCTGGGAACACCATGTATGCTTGTGTCACTCATCCAAA
CAGGCAAACGAATACCCCAACACCTGGACAAAGTGGTGGTCTCTCCACCATTTACTCCACAGTT
CATCAGTCCAAAGAGAGTAAAACTATTCATTCAGGGAAAGCTCCCCTTGACAACATCATCTAAA
TTGCTGAGAGGTCTCGAAAGGAACTGAGGAATGACGCAGCTTCTCCTGATCCCAGGGGAGAGAA
CACAGCTTGGTTTCTGGCTGTCAACAAAATTCGAATATTTAGGATTATCTCTTCCAATTCCTCT
GACCAGAACCTGCTCAAGTACATCAAACATCTAAGGAATAACATCATTTCCAGAGTGTGATCCA
AATTACATCTCCTAATCTGCTCCAGGGCAAAACATGCTTCCATAAACAAGTCTGGACATTGACT
TTCTCCTTGGCAACTGATGGAAATGTGCTTGACAGAGAGTTATAATTTAGAGGACAACCACTCC
TCTCCTTTTACGAAGCAGCAGGATTGTGATTCACTAGGAGAGAGCACAGCGTGTTGGTTACCTA
GGTTGTCTCTGGAATTGGATGGGCCTGTTCCCAAATCTTCACGTGTCATTTACTAGACATACCT
CCTGGGACATGTTCTGGAACCTCCTGAGCTCTGGTCTCCTAACCTGGAAAATGGGAATCCGCCT
GGTACTCAAACCAGGAACCGCAGTTAGCCCTTACATCAGCTGTTCTATCAGCACACCCTTTGGA
CTCTACCTCCAAATATATATCTTAGACCAAACCACTTCTCTCCAAACCTTTAACCTCCACCCCA
TATCAACCCACCATCATCTCCAACCCAAATACTACAGTAAGCTCAAAACAGATTTCCCCAGTTT
TTGCTCTTACTTCCCTTTGATCCTCTCTCTACGAGACAGCCAGAGTTATGTTTTTAATATAAAT
CAGATCCTTCACTTGTCTACTTAAAACTGACCCTGCAAGACTTGCCAGGCACTTAGAAAGAACT
GAGTCTCCATGGCTCTGGGTGGCCCATCTGCAGCCTCAGCTTTCAAGCTCTCCCCACATCCCCC
TCTCTGATCTGGCTTCTCTGATTCTCTTTCAGCCCCTCCAGCAGAGGAGATAGTTTACTCACAT
CTGCCTCAAGACCCTTCTTTGCCTGCCTGGCTCCTTCTTACTCTACAGGTCTCAGTGCATATAT
GTCAACCTCCAAGAAAGACCTCAGACCACTGTCACTGAAGTGGATGCCCGTTTCTCTGCTACAT
CTTCCATGTCGTCTATCTTATGCCATTAAATATTTATTTTTATTTAATGTCTGTTTCTCCTACT
CTACTGTATGTGCTCCGGGAGCAAGGACCGTGACGATTTTATCCTTGTAGCCTGAGCACCTAGC
ACAGTATCCAGCACATAGAAAATGTTCAACGAATACTTTTTTAATAAATAAAGCAATATGTGCT
GCAGTTTTGTGGGAATTAAAGACAACGTGCTTACAGCCCTCTGTGTGGTGCTTAGCGCATGAAA
GAGCTCGATAAACGTGAGCATCACTGTT

hide sequence

RefSeq Acc Id:

XM_022415342 ⟹ XP_022271050

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	21,742,228 - 21,769,521 (+)	NCBI
Dog10K_Boxer_Tasha	38	21,816,924 - 21,844,184 (+)	NCBI

Sequence:

show sequence

TTCCAGTCTGTGACAGGCGGTGCAGGCAGCCCGGGCCAGCCGAGCCCCCGCAGCAGCCTGGGCG
GCTGACAGCATGCTCTGGGTGCTCCTGCTGCTCCCACTGCTCCTCCTCCTCCGGCCAGGGAACA
CAGCTTCACAAGACAGCTCAAACCCACAGACGATGAATGGGATTCTGGGAGAGTCGGTAACTCT
TTCCCCGAAGCTTCCTGTAGGGGAAGATATTCAGTCCATCACCTGGATTCACAGAGGAAGATCT
CTCATCATCATAATGCCAAAAGTTGAACAGTTCTTAGTGACTGATCCAAAATGGAAACATCGAC
TGCAATCCTTGGGGAACTACTCCTTACGACTCAGCAACCTGACAATGGAAGACGCAGGACTTTA
CTGTGCCCAGATAACCATACCAACATCTTCAGAGCTTTCCTGTTATACTCTGAAGATCTTCAGA
CGACTGAGTGTCTTAAATATTACTGTGCACCCTGGGCTGTCCAAGACCGGGACCTGCGAGGTCC
ACCTGGCCTGCTCTGTGGAGAACTCACATGACGCTCTATTAAAGTGGCACGGAGCAGGGAACAC
GTCTATATATGAAGCCAACCTCACCATCTCCTGGGACCCCAGGAATCCCAGTGAACAAAAGTAC
ACTTGTGTGGCTGAAAATATTGTCAGCAGCACATCCTCCTCTGTCTCCATCCAGAGTCTCTGCA
AAGGTTTTTTGAATCAGAAAAATCAACATCTTGATACCATATGGATTATAGTTGTGGCTATTTT
GATGTTTACAGTCATCCTTGTGGGATTATTTGTTTGGAGGAAAAAAGGTTGTTTGTGTAGGACA
GGCATCTTTCATTTCTCTACTCAGCAAACCCAGAGTGCTGCAGCGACCATAAGGAACTTAGATT
ATGTCTCCTTCTCTCCAGGGAACACCATGTATGCTTGTGTCACTCATCCAAACAGGCAAACGAA
TACCCCAACACCTGGACAAAGTGGTGGTCTCTCCACCATTTACTCCACAGTTCATCAGTCCAAA
GAGAGTAAAACTATTCATTCAGGGAAAGCTCCCCTTGACAACATCATCTAAATTGCTGAGAGGT
CTCGAAAGGAACTGAGGAATGACGCAGCTTCTCCTGATCCCAGGGGAGAGAACACAGCTTGGTT
TCTGGCTGTCAACAAAATTCGAATATTTAGGATTATCTCTTCCAATTCCTCTGACCAGAACCTG
CTCAAGTACATCAAACATCTAAGGAATAACATCATTTCCAGAGTGTGATCCAAATTACATCTCC
TAATCTGCTCCAGGGCAAAACATGCTTCCATAAACAAGTCTGGACATTGACTTTCTCCTTGGCA
ACTGATGGAAATGTGCTTGACAGAGAGTTATAATTTAGAGGACAACCACTCCTCTCCTTTTACG
AAGCAGCAGGATTGTGATTCACTAGGAGAGAGCACAGCGTGTTGGTTACCTAGGTTGTCTCTGG
AATTGGATGGGCCTGTTCCCAAATCTTCACGTGTCATTTACTAGACATACCTCCTGGGACATGT
TCTGGAACCTCCTGAGCTCTGGTCTCCTAACCTGGAAAATGGGAATCCGCCTGGTACTCAAACC
AGGAACCGCAGTTAGCCCTTACATCAGCTGTTCTATCAGCACACCCTTTGGACTCTACCTCCAA
ATATATATCTTAGACCAAACCACTTCTCTCCAAACCTTTAACCTCCACCCCATATCAACCCACC
ATCATCTCCAACCCAAATACTACAGTAAGCTCAAAACAGATTTCCCCAGTTTTTGCTCTTACTT
CCCTTTGATCCTCTCTCTACGAGACAGCCAGAGTTATGTTTTTAATATAAATCAGATCCTTCAC
TTGTCTACTTAAAACTGACCCTGCAAGACTTGCCAGGCACTTAGAAAGAACTGAGTCTCCATGG
CTCTGGGTGGCCCATCTGCAGCCTCAGCTTTCAAGCTCTCCCCACATCCCCCTCTCTGATCTGG
CTTCTCTGATTCTCTTTCAGCCCCTCCAGCAGAGGAGATAGTTTACTCACATCTGCCTCAAGAC
CCTTCTTTGCCTGCCTGGCTCCTTCTTACTCTACAGGTCTCAGTGCATATATGTCAACCTCCAA
GAAAGACCTCAGACCACTGTCACTGAAGTGGATGCCCGTTTCTCTGCTACATCTTCCATGTCGT
CTATCTTATGCCATTAAATATTTATTTTTATTTAATGTCTGTTTCTCCTACTCTACTGTATGTG
CTCCGGGAGCAAGGACCGTGACGATTTTATCCTTGTAGCCTGAGCACCTAGCACAGTATCCAGC
ACATAGAAAATGTTCAACGAATACTTTTTTAATAAATAAAGCAATATGTGCTGCAGTTTTGTGG
GAATTAAAGACAACGTGCTTACAGCCCTCTGTGTGGTGCTTAGCGCATGAAAGAGCTCGATAAA
CGTGAGCATCACTGTT

hide sequence

RefSeq Acc Id:

XM_038448666 ⟹ XP_038304594

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	21,859,417 - 21,886,676 (+)	NCBI

RefSeq Acc Id:

XM_038448667 ⟹ XP_038304595

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	21,859,417 - 21,886,676 (+)	NCBI

RefSeq Acc Id:

XM_038448668 ⟹ XP_038304596

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	21,859,417 - 21,886,676 (+)	NCBI

RefSeq Acc Id:

XM_038448669 ⟹ XP_038304597

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	21,859,417 - 21,886,676 (+)	NCBI

RefSeq Acc Id:

XM_038448670 ⟹ XP_038304598

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	21,859,417 - 21,886,676 (+)	NCBI

RefSeq Acc Id:

XM_038448671 ⟹ XP_038304599

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	21,859,417 - 21,886,676 (+)	NCBI

RefSeq Acc Id:

XM_038448672 ⟹ XP_038304600

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	21,859,417 - 21,883,295 (+)	NCBI

RefSeq Acc Id:

XM_038448673 ⟹ XP_038304601

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	21,859,417 - 21,883,305 (+)	NCBI

RefSeq Acc Id:

XM_038464063 ⟹ XP_038319991

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	38	21,816,924 - 21,844,184 (+)	NCBI

RefSeq Acc Id:

XM_038464064 ⟹ XP_038319992

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	38	21,816,924 - 21,840,803 (+)	NCBI

RefSeq Acc Id:

XM_038464065 ⟹ XP_038319993

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	38	21,816,924 - 21,840,813 (+)	NCBI

RefSeq Acc Id:

XM_038522552 ⟹ XP_038378480

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	21,746,431 - 21,774,320 (+)	NCBI

RefSeq Acc Id:

XM_038522553 ⟹ XP_038378481

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	21,746,431 - 21,774,320 (+)	NCBI

RefSeq Acc Id:

XM_038522554 ⟹ XP_038378482

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	21,746,431 - 21,774,320 (+)	NCBI

RefSeq Acc Id:

XM_038522555 ⟹ XP_038378483

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	21,746,431 - 21,774,320 (+)	NCBI

RefSeq Acc Id:

XM_038522556 ⟹ XP_038378484

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	21,746,431 - 21,774,320 (+)	NCBI

RefSeq Acc Id:

XM_038522557 ⟹ XP_038378485

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	21,746,431 - 21,774,320 (+)	NCBI

RefSeq Acc Id:

XM_038522558 ⟹ XP_038378486

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	21,746,431 - 21,770,946 (+)	NCBI

RefSeq Acc Id:

XM_038522559 ⟹ XP_038378487

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	21,746,431 - 21,770,956 (+)	NCBI

RefSeq Acc Id:

XM_038586332 ⟹ XP_038442260

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	22,570,244 - 22,597,519 (+)	NCBI

RefSeq Acc Id:

XM_038586333 ⟹ XP_038442261

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	22,570,244 - 22,597,519 (+)	NCBI

RefSeq Acc Id:

XM_038586334 ⟹ XP_038442262

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	22,570,244 - 22,597,519 (+)	NCBI

RefSeq Acc Id:

XM_038586335 ⟹ XP_038442263

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	22,570,244 - 22,597,519 (+)	NCBI

RefSeq Acc Id:

XM_038586336 ⟹ XP_038442264

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	22,570,244 - 22,597,519 (+)	NCBI

RefSeq Acc Id:

XM_038586337 ⟹ XP_038442265

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	22,570,244 - 22,597,519 (+)	NCBI

RefSeq Acc Id:

XM_038586338 ⟹ XP_038442266

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	22,570,244 - 22,594,138 (+)	NCBI

RefSeq Acc Id:

XM_038586339 ⟹ XP_038442267

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	22,570,244 - 22,594,148 (+)	NCBI

RefSeq Acc Id:

XM_038650752 ⟹ XP_038506680

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	22,160,475 - 22,187,731 (+)	NCBI

RefSeq Acc Id:

XM_038650753 ⟹ XP_038506681

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	22,160,475 - 22,187,731 (+)	NCBI

RefSeq Acc Id:

XM_038650754 ⟹ XP_038506682

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	22,160,475 - 22,187,731 (+)	NCBI

RefSeq Acc Id:

XM_038650755 ⟹ XP_038506683

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	22,160,475 - 22,187,731 (+)	NCBI

RefSeq Acc Id:

XM_038650756 ⟹ XP_038506684

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	22,160,475 - 22,187,731 (+)	NCBI

RefSeq Acc Id:

XM_038650757 ⟹ XP_038506685

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	22,160,475 - 22,187,731 (+)	NCBI

RefSeq Acc Id:

XM_038650758 ⟹ XP_038506686

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	22,160,475 - 22,184,350 (+)	NCBI

RefSeq Acc Id:

XM_038650759 ⟹ XP_038506687

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	22,160,475 - 22,184,361 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005640946	(Get FASTA)	NCBI Sequence Viewer
	XP_005640947	(Get FASTA)	NCBI Sequence Viewer
	XP_005640948	(Get FASTA)	NCBI Sequence Viewer
	XP_005640949	(Get FASTA)	NCBI Sequence Viewer
	XP_022271050	(Get FASTA)	NCBI Sequence Viewer
	XP_038304594	(Get FASTA)	NCBI Sequence Viewer
	XP_038304595	(Get FASTA)	NCBI Sequence Viewer
	XP_038304596	(Get FASTA)	NCBI Sequence Viewer
	XP_038304597	(Get FASTA)	NCBI Sequence Viewer
	XP_038304598	(Get FASTA)	NCBI Sequence Viewer
	XP_038304599	(Get FASTA)	NCBI Sequence Viewer
	XP_038304600	(Get FASTA)	NCBI Sequence Viewer
	XP_038304601	(Get FASTA)	NCBI Sequence Viewer
	XP_038319991	(Get FASTA)	NCBI Sequence Viewer
	XP_038319992	(Get FASTA)	NCBI Sequence Viewer
	XP_038319993	(Get FASTA)	NCBI Sequence Viewer
	XP_038378480	(Get FASTA)	NCBI Sequence Viewer
	XP_038378481	(Get FASTA)	NCBI Sequence Viewer
	XP_038378482	(Get FASTA)	NCBI Sequence Viewer
	XP_038378483	(Get FASTA)	NCBI Sequence Viewer
	XP_038378484	(Get FASTA)	NCBI Sequence Viewer
	XP_038378485	(Get FASTA)	NCBI Sequence Viewer
	XP_038378486	(Get FASTA)	NCBI Sequence Viewer
	XP_038378487	(Get FASTA)	NCBI Sequence Viewer
	XP_038442260	(Get FASTA)	NCBI Sequence Viewer
	XP_038442261	(Get FASTA)	NCBI Sequence Viewer
	XP_038442262	(Get FASTA)	NCBI Sequence Viewer
	XP_038442263	(Get FASTA)	NCBI Sequence Viewer
	XP_038442264	(Get FASTA)	NCBI Sequence Viewer
	XP_038442265	(Get FASTA)	NCBI Sequence Viewer
	XP_038442266	(Get FASTA)	NCBI Sequence Viewer
	XP_038442267	(Get FASTA)	NCBI Sequence Viewer
	XP_038506680	(Get FASTA)	NCBI Sequence Viewer
	XP_038506681	(Get FASTA)	NCBI Sequence Viewer
	XP_038506682	(Get FASTA)	NCBI Sequence Viewer
	XP_038506683	(Get FASTA)	NCBI Sequence Viewer
	XP_038506684	(Get FASTA)	NCBI Sequence Viewer
	XP_038506685	(Get FASTA)	NCBI Sequence Viewer
	XP_038506686	(Get FASTA)	NCBI Sequence Viewer
	XP_038506687	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00040025253.1
	ENSCAFP00040025287.1

RefSeq Acc Id:

XP_005640946 ⟸ XM_005640889

- Peptide Label:

isoform X1

- Sequence:

show sequence

MLWVLLLLPLLLLLRPGNTASQDSSNPQTMNGILGESVTLSPKLPVGEDIQSITWIHRGRSLII
IMPKVEQFLVTDPKWKHRLQSLGNYSLRLSNLTMEDAGLYCAQITIPTSSELSCYTLKIFRRLS
VLNITVHPGLSKTGTCEVHLACSVENSHDALLKWHGAGNTSIYEANLTISWDPRNPSEQKYTCV
AENIVSSTSSSVSIQSLCKGNSLSQVPLGALSSCGVWRVLPAQGFLNQKNQHLDTIWIIVVAIL
MFTVILVGLFVWRKKGCLCRTGIFHFSTQQTQSAAATIRNLDYVSFSPGNTMYACVTHPNRQTN
TPTPGQSGGLSTIYSTVHQSKESKTIHSGKAPLDNII

hide sequence

RefSeq Acc Id:

XP_005640948 ⟸ XM_005640891

- Peptide Label:

isoform X3

- Sequence:

show sequence

MLWVLLLLPLLLLLRPGNTASQDSSNPQTMNGILGESVTLSPKLPVGEDIQSITWIHRGRSLII
IMPKVEQFLVTDPKWKHRLQSLGNYSLRLSNLTMEDAGLYCAQITIPTSSELSCYTLKIFRRLS
VLNITVHPGLSKTGTCEVHLACSVENSHDALLKWHGAGNTSIYEANLTISWDPRNPSEQKYTCV
AENIVSSTSSSVSIQSLCKGNSLSQVPLGALSSCGVWRVLPAQGFLNQKNQHLDTIWIIVVAIL
MFTVILVGLFVWRKKGCLCRTGIFHFSTQQTQSAGNTMYACVTHPNRQTNTPTPGQSGGLSTIY
STVHQSKESKTIHSGKAPLDNII

hide sequence

RefSeq Acc Id:

XP_005640947 ⟸ XM_005640890

- Peptide Label:

isoform X2

- Sequence:

show sequence

MLWVLLLLPLLLLLRPGNTASQDSSNPQTMNGILGESVTLSPKLPVGEDIQSITWIHRGRSLII
IMPKVEQFLVTDPKWKHRLQSLGNYSLRLSNLTMEDAGLYCAQITIPTSSELSCYTLKIFRRLS
VLNITVHPGLSKTGTCEVHLACSVENSHDALLKWHGAGNTSIYEANLTISWDPRNPSEQKYTCV
AENIVSSTSSSVSIQSLCKGNSLSQVPLGALSSCGVWRVLPAQGFLNQKNQHLDTIWIIVVAIL
MFTVILVGLFVWRKKGIFHFSTQQTQSAAATIRNLDYVSFSPGNTMYACVTHPNRQTNTPTPGQ
SGGLSTIYSTVHQSKESKTIHSGKAPLDNII

hide sequence

RefSeq Acc Id:

XP_005640949 ⟸ XM_005640892

- Peptide Label:

isoform X4

- Sequence:

show sequence

MLWVLLLLPLLLLLRPGNTASQDSSNPQTMNGILGESVTLSPKLPVGEDIQSITWIHRGRSLII
IMPKVEQFLVTDPKWKHRLQSLGNYSLRLSNLTMEDAGLYCAQITIPTSSELSCYTLKIFRRLS
VLNITVHPGLSKTGTCEVHLACSVENSHDALLKWHGAGNTSIYEANLTISWDPRNPSEQKYTCV
AENIVSSTSSSVSIQSLCKGNSLSQVPLGALSSCGVWRVLPAQGFLNQKNQHLDTIWIIVVAIL
MFTVILVGLFVWRKKGIFHFSTQQTQSAGNTMYACVTHPNRQTNTPTPGQSGGLSTIYSTVHQS
KESKTIHSGKAPLDNII

hide sequence

RefSeq Acc Id:	XP_022271050 ⟸ XM_022415342
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0YZD5 (UniProtKB/TrEMBL)
- Sequence:	show sequence MLWVLLLLPLLLLLRPGNTASQDSSNPQTMNGILGESVTLSPKLPVGEDIQSITWIHRGRSLII IMPKVEQFLVTDPKWKHRLQSLGNYSLRLSNLTMEDAGLYCAQITIPTSSELSCYTLKIFRRLS VLNITVHPGLSKTGTCEVHLACSVENSHDALLKWHGAGNTSIYEANLTISWDPRNPSEQKYTCV AENIVSSTSSSVSIQSLCKGFLNQKNQHLDTIWIIVVAILMFTVILVGLFVWRKKGCLCRTGIF HFSTQQTQSAAATIRNLDYVSFSPGNTMYACVTHPNRQTNTPTPGQSGGLSTIYSTVHQSKESK TIHSGKAPLDNII hide sequence

RefSeq Acc Id:

ENSCAFP00000032020 ⟸ ENSCAFT00000036617

RefSeq Acc Id:	XP_038378480 ⟸ XM_038522552
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038378482 ⟸ XM_038522554
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038378481 ⟸ XM_038522553
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038378483 ⟸ XM_038522555
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038378484 ⟸ XM_038522556
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038378485 ⟸ XM_038522557
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038378487 ⟸ XM_038522559
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038378486 ⟸ XM_038522558
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038506680 ⟸ XM_038650752
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038506682 ⟸ XM_038650754
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038506681 ⟸ XM_038650753
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038506683 ⟸ XM_038650755
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038506684 ⟸ XM_038650756
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038506685 ⟸ XM_038650757
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038506687 ⟸ XM_038650759
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038506686 ⟸ XM_038650758
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038304594 ⟸ XM_038448666
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038304596 ⟸ XM_038448668
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038304595 ⟸ XM_038448667
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038304597 ⟸ XM_038448669
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038304598 ⟸ XM_038448670
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0YZD5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038304599 ⟸ XM_038448671
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038304601 ⟸ XM_038448673
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038304600 ⟸ XM_038448672
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038319991 ⟸ XM_038464063
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038319993 ⟸ XM_038464065
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038319992 ⟸ XM_038464064
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038442260 ⟸ XM_038586332
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038442262 ⟸ XM_038586334
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038442261 ⟸ XM_038586333
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038442263 ⟸ XM_038586335
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038442264 ⟸ XM_038586336
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0YZD5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038442265 ⟸ XM_038586337
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038442267 ⟸ XM_038586339
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038442266 ⟸ XM_038586338
- Peptide Label:	isoform X7

Protein Domains

Ig-like

Promoters

RGD ID:

13689225

Promoter ID:

EPDNEW_C7294

Type:

initiation region

Name:

SLAMF6_1

Description:

SLAM family member 6

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	21,742,265 - 21,742,325	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000023704	Ensembl
	ENSCAFG00040015808	UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00040029068.1	UniProtKB/TrEMBL
	ENSCAFT00040029104.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.40.10	UniProtKB/TrEMBL
InterPro	Ig-like_dom	UniProtKB/TrEMBL
	Ig-like_dom_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Ig_sub	UniProtKB/TrEMBL
	Ig_V-set	UniProtKB/TrEMBL
NCBI Gene	SLAMF6	ENTREZGENE
PANTHER	SIGNALING LYMPHOCYTIC ACTIVATION MOLECULE	UniProtKB/TrEMBL
	SLAM FAMILY MEMBER 6	UniProtKB/TrEMBL
Pfam	V-set	UniProtKB/TrEMBL
PROSITE	IG_LIKE	UniProtKB/TrEMBL
SMART	SM00409	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48726	UniProtKB/TrEMBL
UniProt	A0A8C0SQL2_CANLF	UniProtKB/TrEMBL
	A0A8C0YZD5	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:46207	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar