SHISA6 (shisa family member 6) - Rat Genome Database

Name: SHISA6
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: SHISA6 (shisa family member 6) Canis lupus familiaris

Analyze

Symbol:

SHISA6

Name:

shisa family member 6

RGD ID:

12174739

Description:

ENCODES a protein that exhibits ionotropic glutamate receptor binding (inferred); PDZ domain binding (inferred); INVOLVED IN excitatory chemical synaptic transmission (inferred); negative regulation of canonical Wnt signaling pathway (inferred); postsynaptic neurotransmitter receptor diffusion trapping (inferred); ASSOCIATED WITH genetic disease (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

shisa homolog 6

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SHISA6 (shisa family member 6)	HGNC	EggNOG, Ensembl, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Treefam
Mus musculus (house mouse):	Shisa6 (shisa family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Shisa6 (shisa family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Shisa6 (shisa family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SHISA6 (shisa family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Shisa6 (shisa family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SHISA6 (shisa family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SHISA6 (shisa family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Shisa6 (shisa family member 6)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	35,420,981 - 35,701,654 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	35,424,242 - 35,707,012 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	35,562,452 - 35,839,708 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	35,530,964 - 35,808,773 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	35,530,964 - 35,809,747 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	35,496,683 - 35,775,486 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	35,452,119 - 35,729,778 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	35,635,323 - 35,913,764 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

excitatory chemical synaptic transmission (IEA)

negative regulation of canonical Wnt signaling pathway (IEA)

postsynaptic neurotransmitter receptor diffusion trapping (IEA)

regulation of AMPA glutamate receptor clustering (IEA)

regulation of short-term neuronal synaptic plasticity (IEA)

spermatogenesis (IEA)

Cellular Component

AMPA glutamate receptor complex (IEA)

asymmetric, glutamatergic, excitatory synapse (IEA)

dendritic spine membrane (IEA)

glutamatergic synapse (IEA,ISO)

membrane (IEA)

postsynaptic density (IEA)

postsynaptic density membrane (IEA,ISO)

postsynaptic membrane (IEA)

Molecular Function

ionotropic glutamate receptor binding (IEA)

PDZ domain binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

SHISA6
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	35,420,981 - 35,701,654 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	35,424,242 - 35,707,012 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	35,562,452 - 35,839,708 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	35,530,964 - 35,808,773 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	35,530,964 - 35,809,747 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	35,496,683 - 35,775,486 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	35,452,119 - 35,729,778 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	35,635,323 - 35,913,764 (+)	NCBI		UU_Cfam_GSD_1.0

SHISA6
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	11,241,213 - 11,564,063 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	11,241,213 - 11,564,063 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	11,144,530 - 11,467,380 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	11,085,465 - 11,402,921 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	11,175,533 - 11,498,055 (+)	NCBI		Celera
Cytogenetic Map	17	p12	NCBI
HuRef	17	11,046,153 - 11,369,076 (+)	NCBI		HuRef
CHM1_1	17	11,154,593 - 11,476,588 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	11,149,418 - 11,472,179 (+)	NCBI		T2T-CHM13v2.0

Shisa6
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	66,102,551 - 66,418,715 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	66,102,551 - 66,416,790 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	66,211,725 - 66,527,984 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	66,211,725 - 66,525,964 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	66,025,227 - 66,339,628 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	66,027,924 - 66,342,321 (-)	NCBI		MGSCv36	mm8
Celera	11	73,147,659 - 73,459,932 (-)	NCBI		Celera
Cytogenetic Map	11	B3	NCBI
cM Map	11	40.55	NCBI

Shisa6
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	51,396,806 - 51,691,156 (-)	NCBI		GRCr8
mRatBN7.2	10	50,897,740 - 51,192,111 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	50,903,333 - 51,192,063 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	55,557,614 - 55,846,501 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	55,047,602 - 55,336,481 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	50,556,088 - 50,843,468 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	52,744,069 - 53,037,853 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	52,749,846 - 53,037,816 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	52,498,328 - 52,791,670 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	52,896,362 - 53,190,809 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	10	50,092,476 - 50,378,235 (-)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

Shisa6
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955467	5,707,561 - 5,998,910 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955467	5,701,521 - 5,998,910 (-)	NCBI	ChiLan1.0	ChiLan1.0

SHISA6
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	62,180,636 - 62,505,459 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	66,987,394 - 67,312,139 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	40,081,234 - 40,405,916 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	44,831,076 - 45,154,237 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	44,836,825 - 45,154,241 (-)	Ensembl	panpan1.1		panPan2

Shisa6
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	50,498,911 - 50,836,666 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936595	4,026,604 - 4,304,857 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936595	3,973,099 - 4,152,706 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SHISA6
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	12	55,757,837 - 56,024,760 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	58,849,892 - 58,898,751 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SHISA6
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	10,584,375 - 10,913,012 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666059	10,348,109 - 10,676,091 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Shisa6
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624786	13,697,330 - 14,001,891 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624786	13,697,178 - 14,007,891 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SHISA6
3599 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium
Low			1	1		1			6	8
Below cutoff	5	5	21	5	6	5	6	6	6		10	6

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014113231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038475706	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038536891	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038601040	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038665609	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000062	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000027894 ⟹ ENSCAFP00000025941

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	35,673,678 - 35,701,623 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000080191 ⟹ ENSCAFP00000066442

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	35,424,242 - 35,707,012 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845005310 ⟹ ENSCAFP00845004225

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	5	35,530,964 - 35,809,747 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845005316 ⟹ ENSCAFP00845004231

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	5	35,530,964 - 35,809,747 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845005322 ⟹ ENSCAFP00845004237

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	5	35,530,964 - 35,809,747 (+)	Ensembl

RefSeq Acc Id:

XM_014113231 ⟹ XP_013968706

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	35,420,981 - 35,701,654 (+)	NCBI
Dog10K_Boxer_Tasha	5	35,562,452 - 35,839,708 (+)	NCBI

Sequence:

show sequence

ATGCATCGTGGCAAGGAGAAGGTCGTCACTATGGAAGAGGAAATTGTGGGTGAATATTCAAAAG
AAACCTATGACAAGGCCCACCGCCCTCCGCGGGAAATGAACATTCACAGGGCTCTGGCTGACAT
CTTAAGACAACAGGGACCAATCCCCATAGCACACTGTGAAAGAGAAACTATCTCGGCTATCAAT
ACCTCTCCCAAAGAGAACACACCGGTCAGATCGTCCTCCAAAAACCACTACACCCCTGTGCGTA
CGGCCAAGCAGACTCCAGGACATTATGGGAAGGATGCTTACCGAAGTGGAGGACCTGATCTCCA
TAACTTCATCTCATCTGGATTTGTCACATTAGGAAGAGGACACACGAAGGGTGATCATCAGTAT
AACCACCCGATTTTAAGCAGTGCTGCCCAGACCCCTACACATGAGAAGCCACGGATGAACAACA
TCCTGACATCGGCCACGGAGCCCTATGACCTCTCTTTCTCCCGCTCCTTCCAGAACTTGGCCCA
CCTACCCCCATCCTATGAGTCAGCAGTGAAGACCCACCCCAGCAAATATTCATCCCTGAAGAGG
CTAACTGACAAGGAAGCTGATGAGTATTACATGAGGAGGCGGCACCTGCCTGACCTGGCCGCCC
GTGGCACCCTGCCCCTCAATGTCATCCAGATGTCCCAGCAGAAGCCCTTACCCCGCGAGCGACC
CCGCCGGCCCATCCGGGCCATGTCGCAGGACAGGGTTCTGTCCCCAGAGCGGGGCCTGCCGGAC
GACTTCGGCTTGCCCTACGACCGCATCCTGTCCGACGAGCAGCTGCTGTCCACGGAGCGCCTGC
ACTCCCAGGACCCGCTGCTGTCCCCGGAGCGGACGGCCTTCCCCGAGCAGTCCCTGTCGCGGGC
CATCTCGCACACGGACGTCTTTGTGTCCACGCCCGTGCTGGACCGGTACCGCATGACCAAGATG
CACTCCCATCCCAGTGCCTCCAGTAACTCCTATGCCACCCTGGGCAAGAGCCAGACGGCCGCCA
AGCGCCAGGCCTTCGCCTCCCGCAGACACAACACGGTGGAGCAGCTGCACTACATCCCGGGCCA
CCACACCTGCTACACAGCCAGCAAGACGGAAGTCACCGTGTGACTGGCGGGGCGGGGCCGCGGG
GAGGGGGCGG

hide sequence

RefSeq Acc Id:

XM_038475706 ⟹ XP_038331634

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	35,496,683 - 35,775,486 (+)	NCBI

RefSeq Acc Id:

XM_038536891 ⟹ XP_038392819

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	35,635,323 - 35,913,764 (+)	NCBI

RefSeq Acc Id:

XM_038601040 ⟹ XP_038456968

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	35,452,119 - 35,729,778 (+)	NCBI

RefSeq Acc Id:

XM_038665609 ⟹ XP_038521537

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	35,530,964 - 35,808,773 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_013968706	(Get FASTA)	NCBI Sequence Viewer
	XP_038331634	(Get FASTA)	NCBI Sequence Viewer
	XP_038392819	(Get FASTA)	NCBI Sequence Viewer
	XP_038456968	(Get FASTA)	NCBI Sequence Viewer
	XP_038521537	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000025941.5
	ENSCAFP00000066442.2
	ENSCAFP00000067738.1
	ENSCAFP00030003640.1
	ENSCAFP00030003658.1
	ENSCAFP00040030054.1
	ENSCAFP00040030158.1
	ENSCAFP00845004225
	ENSCAFP00845004225.1
	ENSCAFP00845004231.1
	ENSCAFP00845004237.1

RefSeq Acc Id:

XP_013968706 ⟸ XM_014113231

- UniProtKB:

A0A8C0M1V3 (UniProtKB/TrEMBL), A0A8I3MNV2 (UniProtKB/TrEMBL), A0A8P0NIQ5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MHRGKEKVVTMEEEIVGEYSKETYDKAHRPPREMNIHRALADILRQQGPIPIAHCERETISAIN
TSPKENTPVRSSSKNHYTPVRTAKQTPGHYGKDAYRSGGPDLHNFISSGFVTLGRGHTKGDHQY
NHPILSSAAQTPTHEKPRMNNILTSATEPYDLSFSRSFQNLAHLPPSYESAVKTHPSKYSSLKR
LTDKEADEYYMRRRHLPDLAARGTLPLNVIQMSQQKPLPRERPRRPIRAMSQDRVLSPERGLPD
DFGLPYDRILSDEQLLSTERLHSQDPLLSPERTAFPEQSLSRAISHTDVFVSTPVLDRYRMTKM
HSHPSASSNSYATLGKSQTAAKRQAFASRRHNTVEQLHYIPGHHTCYTASKTEVTV

hide sequence

RefSeq Acc Id:

ENSCAFP00000066442 ⟸ ENSCAFT00000080191

RefSeq Acc Id:

ENSCAFP00000025941 ⟸ ENSCAFT00000027894

RefSeq Acc Id:

XP_038331634 ⟸ XM_038475706

RefSeq Acc Id:

XP_038456968 ⟸ XM_038601040

RefSeq Acc Id:	XP_038521537 ⟸ XM_038665609
- UniProtKB:	A0A8C0M1V3 (UniProtKB/TrEMBL), A0A8I3MNV2 (UniProtKB/TrEMBL), A0A8P0NIQ5 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038392819 ⟸ XM_038536891
- UniProtKB:	A0A8I3MNV2 (UniProtKB/TrEMBL), A0A8P0NIQ5 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845004237 ⟸ ENSCAFT00845005322

RefSeq Acc Id:

ENSCAFP00845004225 ⟸ ENSCAFT00845005310

RefSeq Acc Id:

ENSCAFP00845004231 ⟸ ENSCAFT00845005316

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000017598	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030002221	UniProtKB/TrEMBL
	ENSCAFG00040018595	UniProtKB/TrEMBL
	ENSCAFG00845002978	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000027894.5	UniProtKB/TrEMBL
	ENSCAFT00000080191.2	UniProtKB/TrEMBL
	ENSCAFT00000098245.1	UniProtKB/TrEMBL
	ENSCAFT00030004104.1	UniProtKB/TrEMBL
	ENSCAFT00030004126.1	UniProtKB/TrEMBL
	ENSCAFT00040034520.1	UniProtKB/TrEMBL
	ENSCAFT00040034637.1	UniProtKB/TrEMBL
	ENSCAFT00845005310	ENTREZGENE
	ENSCAFT00845005310.1	UniProtKB/TrEMBL
	ENSCAFT00845005316.1	UniProtKB/TrEMBL
	ENSCAFT00845005322.1	UniProtKB/TrEMBL
InterPro	Shisa	UniProtKB/TrEMBL
NCBI Gene	SHISA6	ENTREZGENE
PANTHER	PROTEIN SHISA-6	UniProtKB/TrEMBL
	PTHR31774	UniProtKB/TrEMBL
Pfam	Shisa	UniProtKB/TrEMBL
UniProt	A0A8C0M1V3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Z1L8_CANLF	UniProtKB/TrEMBL
	A0A8I3MNV2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MNW3_CANLF	UniProtKB/TrEMBL
	A0A8I3N3X4_CANLF	UniProtKB/TrEMBL
	A0A8P0NIQ5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0PEX7_CANLF	UniProtKB/TrEMBL
	A0A8P0TJ87_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:46148	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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