ENTREP1 (endosomal transmembrane epsin interactor 1)

Gene: ENTREP1 (endosomal transmembrane epsin interactor 1) Canis lupus familiaris

Analyze

Symbol:

ENTREP1

Name:

endosomal transmembrane epsin interactor 1

RGD ID:

12168375

Description:

ENCODES a protein that exhibits ubiquitin ligase activator activity (inferred); INVOLVED IN receptor internalization (ortholog); ASSOCIATED WITH genetic disease (ortholog); prostate cancer (ortholog); FOUND IN early endosome membrane (inferred); late endosome membrane (inferred); membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

FAM189A2; family with sequence similarity 189 member A2; protein FAM189A2

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	88,004,174 - 88,067,491 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	88,004,615 - 88,067,495 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	88,472,446 - 88,535,985 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	88,552,605 - 88,616,233 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	88,549,332 - 88,616,233 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	88,207,428 - 88,271,024 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	87,914,308 - 87,978,180 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	88,678,400 - 88,742,037 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

prostate cancer (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

CXCL12-activated CXCR4 signaling pathway (IEA)

negative adaptation of signaling pathway (IEA)

receptor internalization (IEA,ISO)

Cellular Component

early endosome membrane (IEA)

late endosome membrane (IEA)

membrane (IEA)

plasma membrane (IEA)

recycling endosome membrane (IEA)

Molecular Function

protein binding (ISO)

ubiquitin ligase activator activity (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

ENTREP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	88,004,174 - 88,067,491 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	88,004,615 - 88,067,495 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	88,472,446 - 88,535,985 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	88,552,605 - 88,616,233 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	88,549,332 - 88,616,233 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	88,207,428 - 88,271,024 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	87,914,308 - 87,978,180 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	88,678,400 - 88,742,037 (-)	NCBI		UU_Cfam_GSD_1.0

ENTREP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	69,324,567 - 69,392,456 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	69,324,567 - 69,392,558 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	71,939,483 - 72,007,372 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	71,134,061 - 71,197,188 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	69,173,794 - 69,236,922	NCBI
Celera	9	42,529,998 - 42,597,862 (+)	NCBI		Celera
Cytogenetic Map	9	q21.12	NCBI
HuRef	9	41,778,984 - 41,846,639 (+)	NCBI		HuRef
CHM1_1	9	72,084,794 - 72,153,792 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	81,491,223 - 81,559,059 (+)	NCBI		T2T-CHM13v2.0

Entrep1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	23,950,114 - 24,008,800 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	23,950,114 - 24,008,383 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	23,972,750 - 24,031,436 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	23,972,750 - 24,031,019 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	24,047,240 - 24,105,509 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	24,039,847 - 24,113,968 (-)	NCBI		MGSCv36	mm8
Celera	19	24,731,356 - 24,792,034 (-)	NCBI		Celera
Cytogenetic Map	19	B	NCBI
cM Map	19	19.0	NCBI

Entrep1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	231,018,987 - 231,073,474 (-)	NCBI		GRCr8
mRatBN7.2	1	221,592,500 - 221,646,603 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	221,592,503 - 221,646,758 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	230,040,422 - 230,096,150 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	236,970,477 - 237,026,204 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	229,788,513 - 229,844,240 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	241,822,152 - 241,876,089 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	241,822,626 - 241,875,864 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	249,102,130 - 249,155,543 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	227,335,482 - 227,410,712 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	227,499,523 - 227,574,470 (-)	NCBI
Celera	1	218,804,632 - 218,858,460 (-)	NCBI		Celera
Cytogenetic Map	1	q51	NCBI

Entrep1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955434	3,615,182 - 3,704,014 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955434	3,615,284 - 3,704,014 (-)	NCBI	ChiLan1.0	ChiLan1.0

ENTREP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	68,530,788 - 68,601,238 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	68,536,733 - 68,607,177 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	55,400,544 - 55,468,662 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	68,100,260 - 68,156,117 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

Entrep1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	135,501,057 - 135,561,137 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936503	5,610,573 - 5,672,308 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936503	5,611,867 - 5,671,947 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ENTREP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	222,658,382 - 222,725,259 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	222,658,488 - 222,725,262 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	248,928,187 - 248,994,972 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ENTREP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	80,421,600 - 80,485,566 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	80,421,683 - 80,484,918 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	68,829,335 - 68,894,865 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Entrep1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624736	3,668,989 - 3,747,463 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624736	3,668,349 - 3,748,010 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ENTREP1
984 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	4	5	6		5		6	6	3		10	6
Low	1		16	6	1	6			9	8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005615882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022421428	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038466442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038527135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038591447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038655249	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000003005 ⟹ ENSCAFP00000002787

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	88,004,615 - 88,067,495 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845001490 ⟹ ENSCAFP00845001168

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	88,549,332 - 88,616,233 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845001505 ⟹ ENSCAFP00845001183

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	88,554,953 - 88,616,233 (-)	Ensembl

RefSeq Acc Id:

XM_005615882 ⟹ XP_005615939

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	88,004,174 - 88,067,491 (-)	NCBI
Dog10K_Boxer_Tasha	1	88,472,446 - 88,535,985 (-)	NCBI

Sequence:

show sequence

GCTGCCCGCTCGCCCGCTGCTGTCGCTCGGGCTGCTGCAGCTGATCCTGGGCTGCTGCATGGTG
GCGCTGAGCTTCGGGGCGCTGTCGCTGAGCAGCTCCCCGCAGGTGAAGAACTCGTGCCCCTTCT
GGGCCGGCTCGTCGGTGATACTCTCTGGAATCATAGGATTAACAACTTGGAAGCGGCCTATGAT
ACTCCTGATGAACCTCTTCGTGCTGCTATCCGTGGTGTGTGTCCTCTTAAATCTAGCTGGATTT
ATCCTCGGCTGCCAGGGGGCCCAGTTTGTGTCCAGCGTGCCCAGGTGTGATCTGGTGGACCTGG
GAGAAGGCAAGATTTGCTTCTGTTGTGAAGAATTTCAACCAGCCAAATGCACAGACAAAGAAAA
TGCCTTGAAACTCTTTCCCGTCCAGCCTTGTAGTGCTGTTCACCTTCTACTTAAGAAAGTCCTT
TTCGCCCTGTGTGCCTTGAATGCCCTGACCACCACTGTCTGCTTGGTGGCAGCTGCCCTTCGTT
ACCTCCAGATATTTGCAGCCAGAAGATCCTGCATCGATGAGTCCCAAATTTCTGCCGAGGAAGT
GGAAGAACACGGACGGCTCCCTGACCCTGACGACTTTGTGCCACCGGCGCCCCCGCCTTCCTAT
TTCGCCACATTTTACTCCTGCACGCCCCGGATGAACCGCAGGATGCTCGGCAGTGATGTCATTC
CACTCCCACACATCTATGGAGCACGAATCAAAGGTGTGGAAGTGTTCTGTCCCCTGGACCCCCC
GCCTCCTTACGAAGCTGTGGTGAGCCAGACAGACCAGGAACAGGGATCTTCACTCCATATGCCA
GAAGGATCAGAAGGTGCCATGAGCCCCTTGGAACCGATCTGCGTGCCAGTGATGCAAGGTGAGG
ACATTCCTAACACACCTGGAGAAGAAAGCACATCCATCTCAATTCCTGATGCAAACCAGCTATA
TCCCATGCGAAGTCGGAGAGTCTTCCCACTCCTGAGGACAAGATCGAGGAGCGACCCTGTGCTG
CACCATTCCGTGGAGAGAGCTGTCCCCGTGCTCAGCTGCGAAGCTGCAACGCAGACTGAGGGGA
GACCAGATCTGGCCACGGTGACCCTGAGGAGGGGGTTGAAGTGCAGAGCTTCGCGATGCCGGCC
ACGGTCCCTGATCGATTACAAGTCCTACATGGACACAAAACTGCTGGTGGCGAGGTTCCTGGAG
CAGTCCTCCTGCAGTATGACCCCAGACATCCATGAGCTCGTGGAAAACATTAAATCTGTTCTGA
AGTCCGACGAGGAGCACATGGAGGAGGCCATCACAAGTGCCAGCTTCCTAGAACAGATCATGGC
CCCGTTGCAGCCCAGCACTTCCCGGGCCCACGTGCCACCATCGCGGAGACAACCTGGCCTCTTG
CACCTGCGGAGCTGCGGAGACCTCAGCACCTTTGTCCCTGCGGGGAGGCCCCGAGCCGAGAGGA
GGCCCCGGCGAGCAGTGGAGGCTGAGCGGCCCCACAGCCTCATCGGTGTCATCCGGGAGACCAT
CCTGTGAACCTGGGGGGCCAGGCACCCCTTTCCCCGTCGGCCTGAGTGAGGAGCAGGAAGGAAG
ATGCACCCCGATGGCAGCAGGATGATCGCTCCTGACCTTGGAGCGCCCTGGCTGGGAGTGCGCA
TGCCCTCTCAGAAGGGGGGCACTCCAGAGGACATTTGTTCCCGTGTTCTGCTGACTGAGGACAT
ACAGGGGTGGATAAGCGGGTTCTTGCAGGCCCATCTGGCTATTAGATGCGCTGGAGGCGGTGGA
GGCAGCATCCTTCCAGCCTCGGCCAAGTGCCCAGGTCCCGTGGACAGAAACTGGGTTAAAGATT
CTTTGCCTGCCTCCCTCCCCGTGGCTGTTGGGCTGACCTGAGTTCCTCCCTCAGTGAAGGACAG
AGCTGCTGGGCCGCTACTCAGAGCCTCCACAGCCTTTGGTGGCTCAGCCAGGGAGCAGTGGGCA
CAGACGCAGGATGACTAACCCCCATGTGCTGCACTTGTCAAGCTTCGTTTTAGGGCACCCCCAA
GTCACAGTCTCTTTAGGAAAAATGGGAAACTCGGTCAGTGATAAATAGTAATGAAAGATGTTGA
GAGGGAGGTTCTTGTGGATTCCATTTATTCCTGCTTGCAAAACTAGAGATGGCTAAGTCCCCAC
CGAGAATAAAAATGTGTACTTTGGACCTCTGG

hide sequence

RefSeq Acc Id:

XM_038466442 ⟹ XP_038322370

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	88,207,428 - 88,271,024 (-)	NCBI

RefSeq Acc Id:

XM_038527135 ⟹ XP_038383063

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	88,678,400 - 88,742,037 (-)	NCBI

RefSeq Acc Id:

XM_038591447 ⟹ XP_038447375

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	87,914,308 - 87,978,180 (-)	NCBI

RefSeq Acc Id:

XM_038655249 ⟹ XP_038511177

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	88,552,605 - 88,616,233 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005615939	(Get FASTA)	NCBI Sequence Viewer
	XP_038322370	(Get FASTA)	NCBI Sequence Viewer
	XP_038383063	(Get FASTA)	NCBI Sequence Viewer
	XP_038447375	(Get FASTA)	NCBI Sequence Viewer
	XP_038511177	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000002787.5
	ENSCAFP00000068781.1
	ENSCAFP00040002499.1
	ENSCAFP00845001168
	ENSCAFP00845001168.1
	ENSCAFP00845001183.1

RefSeq Acc Id:

XP_005615939 ⟸ XM_005615882

- UniProtKB:

A0A8C0LMP6 (UniProtKB/TrEMBL), A0A8P0TKS3 (UniProtKB/TrEMBL), A0A8C0PYW2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVALSFGALSLSSSPQVKNSCPFWAGSSVILSGIIGLTTWKRPMILLMNLFVLLSVVCVLLNLA
GFILGCQGAQFVSSVPRCDLVDLGEGKICFCCEEFQPAKCTDKENALKLFPVQPCSAVHLLLKK
VLFALCALNALTTTVCLVAAALRYLQIFAARRSCIDESQISAEEVEEHGRLPDPDDFVPPAPPP
SYFATFYSCTPRMNRRMLGSDVIPLPHIYGARIKGVEVFCPLDPPPPYEAVVSQTDQEQGSSLH
MPEGSEGAMSPLEPICVPVMQGEDIPNTPGEESTSISIPDANQLYPMRSRRVFPLLRTRSRSDP
VLHHSVERAVPVLSCEAATQTEGRPDLATVTLRRGLKCRASRCRPRSLIDYKSYMDTKLLVARF
LEQSSCSMTPDIHELVENIKSVLKSDEEHMEEAITSASFLEQIMAPLQPSTSRAHVPPSRRQPG
LLHLRSCGDLSTFVPAGRPRAERRPRRAVEAERPHSLIGVIRETIL

hide sequence

RefSeq Acc Id:

ENSCAFP00000002787 ⟸ ENSCAFT00000003005

RefSeq Acc Id:

XP_038322370 ⟸ XM_038466442

RefSeq Acc Id:

XP_038447375 ⟸ XM_038591447

RefSeq Acc Id:	XP_038511177 ⟸ XM_038655249
- UniProtKB:	A0A8I3RPH4 (UniProtKB/TrEMBL), A0A8C0PYW2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038383063 ⟸ XM_038527135
- UniProtKB:	A0A8C0PYW2 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845001183 ⟸ ENSCAFT00845001505

RefSeq Acc Id:

ENSCAFP00845001168 ⟸ ENSCAFT00845001490

Promoters

RGD ID:

13682094

Promoter ID:

EPDNEW_C161

Type:

initiation region

Name:

FAM189A2_1

Description:

family with sequence similarity 189 member A2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	88,068,086 - 88,068,146	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000001900	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00040001504	UniProtKB/TrEMBL
	ENSCAFG00845000882	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000003005.5	UniProtKB/TrEMBL
	ENSCAFT00000109475.1	UniProtKB/TrEMBL
	ENSCAFT00040002892.1	UniProtKB/TrEMBL
	ENSCAFT00845001490	ENTREZGENE
	ENSCAFT00845001490.1	UniProtKB/TrEMBL
	ENSCAFT00845001505.1	UniProtKB/TrEMBL
InterPro	CD20-like	UniProtKB/TrEMBL
	FAM189	UniProtKB/TrEMBL
NCBI Gene	FAM189A2	ENTREZGENE
PANTHER	PROTEIN FAM189A2	UniProtKB/TrEMBL
	PTHR17615	UniProtKB/TrEMBL
Pfam	CD20	UniProtKB/TrEMBL
UniProt	A0A8C0LMP6	ENTREZGENE
	A0A8C0PYW2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MGT7_CANLF	UniProtKB/TrEMBL
	A0A8I3RPH4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0S7R3_CANLF	UniProtKB/TrEMBL
	A0A8P0TKS3	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:40638	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2022-06-06	ENTREP1	endosomal transmembrane epsin interactor 1	FAM189A2	family with sequence similarity 189 member A2	Symbol and/or name change	19259463	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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