MECOM (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 34 | 33,747,495 - 34,299,389 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 34 | 33,748,843 - 34,299,276 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 34 | 42,824,121 - 43,375,991 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 34 | 33,824,972 - 34,377,968 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 34 | 33,826,305 - 34,377,648 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 34 | 33,772,569 - 34,324,831 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 34 | 33,739,669 - 34,292,140 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 34 | 34,003,272 - 34,556,327 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
MECOM (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 3 | 169,083,507 - 169,663,712 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 169,083,499 - 169,663,775 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 168,801,295 - 169,381,500 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 170,283,981 - 170,348,216 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 170,285,251 - 170,346,795 | NCBI | | | | | Celera | 3 | 167,199,811 - 167,780,346 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q26.2 | NCBI | | | | | HuRef | 3 | 166,172,067 - 166,751,440 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 168,763,814 - 169,344,623 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 171,867,472 - 172,447,663 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Mecom (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 3 | 30,005,445 - 30,563,937 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 30,005,445 - 30,602,157 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 29,951,296 - 30,509,759 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 29,951,296 - 30,548,008 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 29,850,218 - 30,408,409 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 30,143,789 - 30,188,737 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 29,872,412 - 30,423,227 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | A3 | NCBI | | | | | cM Map | 3 | 12.66 | NCBI | | | | |
|
Mecom (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 2 | 114,837,815 - 115,393,052 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 112,909,353 - 113,464,583 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 112,909,321 - 113,464,590 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 119,556,006 - 120,111,375 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 117,668,580 - 118,223,966 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 112,665,046 - 112,939,546 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 117,396,084 - 117,993,604 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 117,396,007 - 117,454,769 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 137,080,581 - 137,665,758 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 114,814,409 - 114,882,676 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 114,759,366 - 114,831,177 (-) | NCBI | | | | | Celera | 2 | 108,052,044 - 108,638,470 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q24 | NCBI | | | | |
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Mecom (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955448 | 18,259,083 - 18,439,646 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955448 | 18,259,847 - 18,542,085 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
MECOM (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 2 | 166,979,626 - 167,557,973 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 166,984,499 - 167,562,688 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 166,099,530 - 166,677,739 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 174,154,814 - 174,731,344 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 174,154,814 - 174,731,252 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
Mecom (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405602 | 100,339,369 - 100,879,677 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936593 | 3,106,202 - 3,282,596 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936593 | 2,742,236 - 3,282,596 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
MECOM (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 13 | 107,754,482 - 108,335,702 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 107,753,207 - 108,336,136 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 116,467,012 - 117,101,295 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
MECOM (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 15 | 19,726,423 - 20,320,832 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 15 | 20,256,384 - 20,320,834 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666063 | 28,540,228 - 29,135,736 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Mecom (Heterocephalus glaber - naked mole-rat) |
|