TCF20 (transcription factor 20) - Rat Genome Database

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Gene: TCF20 (transcription factor 20) Canis lupus familiaris
Analyze
Symbol: TCF20
Name: transcription factor 20
RGD ID: 12157661
Description: ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); transcription cis-regulatory region binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); common variable immunodeficiency 4 (ortholog); FOUND IN nuclear body (inferred); nucleoplasm (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11023,195,037 - 23,250,681 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1023,140,603 - 23,250,078 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1023,082,752 - 23,185,690 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01023,892,727 - 23,995,689 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1023,885,658 - 23,994,451 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11023,609,985 - 23,712,911 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01023,929,381 - 24,033,342 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01024,105,187 - 24,208,139 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
TCF20
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11023,195,037 - 23,250,681 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1023,140,603 - 23,250,078 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1023,082,752 - 23,185,690 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01023,892,727 - 23,995,689 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1023,885,658 - 23,994,451 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11023,609,985 - 23,712,911 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01023,929,381 - 24,033,342 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01024,105,187 - 24,208,139 (+)NCBIUU_Cfam_GSD_1.0
TCF20
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382242,160,013 - 42,343,537 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2242,160,013 - 42,343,616 (-)EnsemblGRCh38hg38GRCh38
GRCh372242,556,019 - 42,679,933 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362240,885,963 - 40,941,389 (-)NCBINCBI36Build 36hg18NCBI36
Build 342240,880,516 - 40,935,943NCBI
Celera2226,362,210 - 26,417,642 (-)NCBICelera
Cytogenetic Map22q13.2NCBI
HuRef2225,521,823 - 25,577,085 (-)NCBIHuRef
CHM1_12242,515,764 - 42,571,145 (-)NCBICHM1_1
T2T-CHM13v2.02242,639,511 - 42,824,582 (-)NCBIT2T-CHM13v2.0
Tcf20
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391582,692,648 - 82,872,304 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1582,692,637 - 82,872,073 (-)EnsemblGRCm39 Ensembl
GRCm381582,808,447 - 82,988,103 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1582,808,436 - 82,987,872 (-)EnsemblGRCm38mm10GRCm38
MGSCv371582,639,052 - 82,742,564 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361582,637,405 - 82,739,900 (-)NCBIMGSCv36mm8
Celera1584,941,600 - 85,045,189 (-)NCBICelera
Cytogenetic Map15E1NCBI
cM Map1538.73NCBI
Tcf20
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87115,833,523 - 116,009,790 (-)NCBIGRCr8
mRatBN7.27113,953,449 - 114,104,166 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7113,954,089 - 114,051,839 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7115,709,370 - 115,806,558 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07117,933,502 - 118,030,662 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07117,902,954 - 118,000,112 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07123,670,135 - 123,767,797 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7123,671,028 - 123,767,797 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07123,655,097 - 123,753,836 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47120,815,411 - 120,929,716 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera7110,269,528 - 110,366,780 (-)NCBICelera
Cytogenetic Map7q34NCBI
Tcf20
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541327,674,787 - 27,745,528 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541327,677,377 - 27,726,990 (-)NCBIChiLan1.0ChiLan1.0
TCF20
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22351,993,149 - 52,048,024 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12254,688,578 - 54,743,475 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02223,055,704 - 23,240,003 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12241,124,871 - 41,234,853 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2241,124,871 - 41,180,013 (-)Ensemblpanpan1.1panPan2
Tcf20
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244049456,622,083 - 6,799,194 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936718179,777 - 358,166 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936718180,145 - 233,037 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TCF20
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl56,484,365 - 6,528,172 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.156,430,217 - 6,534,948 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.253,819,137 - 3,835,324 (-)NCBISscrofa10.2Sscrofa10.2susScr3
TCF20
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11924,693,036 - 24,877,150 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1924,692,374 - 24,853,507 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666045100,518,678 - 100,706,000 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Tcf20
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247526,446,414 - 6,537,238 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TCF20
429 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 9 1 1 8 8 10
Low 5 5 13 6 5 6 5 6 4 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014117304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022424348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022424349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038488410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038488411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038488413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038488414 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038550331 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038550333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038550334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038550335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038614306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038614307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038614308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038614309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038637661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038637671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038679649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038679650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038679651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038679652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000001514   ⟹   ENSCAFP00000001391
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1023,140,603 - 23,250,078 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000087306   ⟹   ENSCAFP00000047019
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1023,140,603 - 23,245,905 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845026620   ⟹   ENSCAFP00845020977
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1023,885,658 - 23,994,451 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845026646   ⟹   ENSCAFP00845020999
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1023,885,658 - 23,990,499 (+)Ensembl
RefSeq Acc Id: XM_014117304   ⟹   XP_013972779
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11023,195,051 - 23,250,681 (+)NCBI
Dog10K_Boxer_Tasha1023,130,104 - 23,185,690 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022424348   ⟹   XP_022280056
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11023,195,051 - 23,250,681 (+)NCBI
Dog10K_Boxer_Tasha1023,130,104 - 23,185,690 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038488410   ⟹   XP_038344338
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11023,657,333 - 23,712,911 (+)NCBI
RefSeq Acc Id: XM_038488411   ⟹   XP_038344339
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11023,609,985 - 23,712,911 (+)NCBI
RefSeq Acc Id: XM_038488413   ⟹   XP_038344341
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11023,610,549 - 23,712,911 (+)NCBI
RefSeq Acc Id: XM_038488414   ⟹   XP_038344342
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11023,657,333 - 23,712,911 (+)NCBI
RefSeq Acc Id: XM_038550331   ⟹   XP_038406259
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01024,152,559 - 24,208,139 (+)NCBI
RefSeq Acc Id: XM_038550333   ⟹   XP_038406261
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01024,105,187 - 24,208,139 (+)NCBI
RefSeq Acc Id: XM_038550334   ⟹   XP_038406262
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01024,105,752 - 24,208,139 (+)NCBI
RefSeq Acc Id: XM_038550335   ⟹   XP_038406263
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01024,152,559 - 24,208,139 (+)NCBI
RefSeq Acc Id: XM_038614306   ⟹   XP_038470234
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01023,976,704 - 24,033,342 (+)NCBI
RefSeq Acc Id: XM_038614307   ⟹   XP_038470235
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01023,929,381 - 24,033,342 (+)NCBI
RefSeq Acc Id: XM_038614308   ⟹   XP_038470236
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01023,929,949 - 24,033,342 (+)NCBI
RefSeq Acc Id: XM_038614309   ⟹   XP_038470237
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01023,976,704 - 24,033,342 (+)NCBI
RefSeq Acc Id: XM_038637661   ⟹   XP_038493589
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1023,082,752 - 23,185,690 (+)NCBI
RefSeq Acc Id: XM_038637671   ⟹   XP_038493599
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1023,083,317 - 23,185,690 (+)NCBI
RefSeq Acc Id: XM_038679649   ⟹   XP_038535577
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01023,940,099 - 23,995,689 (+)NCBI
RefSeq Acc Id: XM_038679650   ⟹   XP_038535578
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01023,892,727 - 23,995,689 (+)NCBI
RefSeq Acc Id: XM_038679651   ⟹   XP_038535579
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01023,893,292 - 23,995,689 (+)NCBI
RefSeq Acc Id: XM_038679652   ⟹   XP_038535580
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01023,940,099 - 23,995,689 (+)NCBI
Protein Sequences
Protein RefSeqs XP_013972779 (Get FASTA)   NCBI Sequence Viewer  
  XP_022280056 (Get FASTA)   NCBI Sequence Viewer  
  XP_038344338 (Get FASTA)   NCBI Sequence Viewer  
  XP_038344339 (Get FASTA)   NCBI Sequence Viewer  
  XP_038344341 (Get FASTA)   NCBI Sequence Viewer  
  XP_038344342 (Get FASTA)   NCBI Sequence Viewer  
  XP_038406259 (Get FASTA)   NCBI Sequence Viewer  
  XP_038406261 (Get FASTA)   NCBI Sequence Viewer  
  XP_038406262 (Get FASTA)   NCBI Sequence Viewer  
  XP_038406263 (Get FASTA)   NCBI Sequence Viewer  
  XP_038470234 (Get FASTA)   NCBI Sequence Viewer  
  XP_038470235 (Get FASTA)   NCBI Sequence Viewer  
  XP_038470236 (Get FASTA)   NCBI Sequence Viewer  
  XP_038470237 (Get FASTA)   NCBI Sequence Viewer  
  XP_038493589 (Get FASTA)   NCBI Sequence Viewer  
  XP_038493599 (Get FASTA)   NCBI Sequence Viewer  
  XP_038535577 (Get FASTA)   NCBI Sequence Viewer  
  XP_038535578 (Get FASTA)   NCBI Sequence Viewer  
  XP_038535579 (Get FASTA)   NCBI Sequence Viewer  
  XP_038535580 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000001391.6
  ENSCAFP00000047019.2
  ENSCAFP00030039442.1
  ENSCAFP00030039452.1
  ENSCAFP00030039469.1
  ENSCAFP00040023817.1
  ENSCAFP00040023846.1
  ENSCAFP00040023866.1
  ENSCAFP00040023898.1
  ENSCAFP00845020977
  ENSCAFP00845020977.1
  ENSCAFP00845020999
  ENSCAFP00845020999.1
Reference Protein Sequences
RefSeq Acc Id: XP_013972779   ⟸   XM_014117304
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SQN2 (UniProtKB/TrEMBL),   A0A8P0N479 (UniProtKB/TrEMBL),   A0A8I3NJL5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022280056   ⟸   XM_022424348
- Peptide Label: isoform X1
- UniProtKB: A0A8I3NJL5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000001391   ⟸   ENSCAFT00000001514
RefSeq Acc Id: ENSCAFP00000047019   ⟸   ENSCAFT00000087306
RefSeq Acc Id: XP_038344339   ⟸   XM_038488411
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038344341   ⟸   XM_038488413
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038344338   ⟸   XM_038488410
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038344342   ⟸   XM_038488414
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038470235   ⟸   XM_038614307
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038470236   ⟸   XM_038614308
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038470234   ⟸   XM_038614306
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038470237   ⟸   XM_038614309
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038535578   ⟸   XM_038679650
- Peptide Label: isoform X2
- UniProtKB: A0A8C0YYR0 (UniProtKB/TrEMBL),   A0A8I3RYF6 (UniProtKB/TrEMBL),   A0A8I3NJL5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038535579   ⟸   XM_038679651
- Peptide Label: isoform X2
- UniProtKB: A0A8C0YYR0 (UniProtKB/TrEMBL),   A0A8I3RYF6 (UniProtKB/TrEMBL),   A0A8I3NJL5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038535577   ⟸   XM_038679649
- Peptide Label: isoform X1
- UniProtKB: A0A8I3NJL5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038535580   ⟸   XM_038679652
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SQN2 (UniProtKB/TrEMBL),   A0A8P0N479 (UniProtKB/TrEMBL),   A0A8I3NJL5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038493589   ⟸   XM_038637661
- Peptide Label: isoform X2
- UniProtKB: A0A8C0YYR0 (UniProtKB/TrEMBL),   A0A8I3RYF6 (UniProtKB/TrEMBL),   A0A8I3NJL5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038493599   ⟸   XM_038637671
- Peptide Label: isoform X2
- UniProtKB: A0A8C0YYR0 (UniProtKB/TrEMBL),   A0A8I3RYF6 (UniProtKB/TrEMBL),   A0A8I3NJL5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038406261   ⟸   XM_038550333
- Peptide Label: isoform X2
- UniProtKB: A0A8C0YYR0 (UniProtKB/TrEMBL),   A0A8I3NJL5 (UniProtKB/TrEMBL),   A0A8I3RYF6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038406262   ⟸   XM_038550334
- Peptide Label: isoform X2
- UniProtKB: A0A8C0YYR0 (UniProtKB/TrEMBL),   A0A8I3NJL5 (UniProtKB/TrEMBL),   A0A8I3RYF6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038406259   ⟸   XM_038550331
- Peptide Label: isoform X1
- UniProtKB: A0A8I3NJL5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038406263   ⟸   XM_038550335
- Peptide Label: isoform X3
- UniProtKB: A0A8C0SQN2 (UniProtKB/TrEMBL),   A0A8I3NJL5 (UniProtKB/TrEMBL),   A0A8P0N479 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845020999   ⟸   ENSCAFT00845026646
RefSeq Acc Id: ENSCAFP00845020977   ⟸   ENSCAFT00845026620
Protein Domains
PHD-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000000978 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030024549 UniProtKB/TrEMBL
  ENSCAFG00040014864 UniProtKB/TrEMBL
  ENSCAFG00845014889 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000001514.6 UniProtKB/TrEMBL
  ENSCAFT00000087306.2 UniProtKB/TrEMBL
  ENSCAFT00030045179.1 UniProtKB/TrEMBL
  ENSCAFT00030045189.1 UniProtKB/TrEMBL
  ENSCAFT00030045208.1 UniProtKB/TrEMBL
  ENSCAFT00040027408.1 UniProtKB/TrEMBL
  ENSCAFT00040027446.1 UniProtKB/TrEMBL
  ENSCAFT00040027473.1 UniProtKB/TrEMBL
  ENSCAFT00040027509.1 UniProtKB/TrEMBL
  ENSCAFT00845026620 ENTREZGENE
  ENSCAFT00845026620.1 UniProtKB/TrEMBL
  ENSCAFT00845026646 ENTREZGENE
  ENSCAFT00845026646.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/TrEMBL
InterPro EPHD UniProtKB/TrEMBL
  TCF-20_ePHD UniProtKB/TrEMBL
  Znf_PHD UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
KEGG Report cfa:481224 UniProtKB/TrEMBL
NCBI Gene TCF20 ENTREZGENE
PANTHER RETINOIC ACID INDUCED 1/TRANSCRIPTION FACTOR 20 UniProtKB/TrEMBL
  TRANSCRIPTION FACTOR 20 UniProtKB/TrEMBL
Pfam zf-HC5HC2H UniProtKB/TrEMBL
PROSITE EPHD UniProtKB/TrEMBL
SMART PHD UniProtKB/TrEMBL
UniProt A0A8C0PDH3_CANLF UniProtKB/TrEMBL
  A0A8C0PK93_CANLF UniProtKB/TrEMBL
  A0A8C0SMC6_CANLF UniProtKB/TrEMBL
  A0A8C0SNX1_CANLF UniProtKB/TrEMBL
  A0A8C0SQN2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0YYR0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NJL5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3RYF6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0N479 ENTREZGENE
UniProt Secondary A0A8P0N479 UniProtKB/TrEMBL
VGNC ID VGNC:47192 ENTREZGENE