NMRAL1 (NmrA like redox sensor 1) - Rat Genome Database

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Gene: NMRAL1 (NmrA like redox sensor 1) Canis lupus familiaris
Analyze
Symbol: NMRAL1
Name: NmrA like redox sensor 1
RGD ID: 12156087
Description: ENCODES a protein that exhibits identical protein binding (inferred); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); idiopathic generalized epilepsy (ortholog); FOUND IN nucleoplasm (inferred); nucleus (inferred); perinuclear region of cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: NmrA-like family domain containing 1; nmrA-like family domain-containing protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1636,918,303 - 36,927,581 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl636,916,787 - 36,927,578 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha638,246,584 - 38,255,882 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0637,122,700 - 37,132,011 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl637,122,349 - 37,132,010 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1636,916,793 - 36,926,089 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0636,809,975 - 36,819,274 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0637,211,223 - 37,220,526 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
NMRAL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1636,918,303 - 36,927,581 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl636,916,787 - 36,927,578 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha638,246,584 - 38,255,882 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0637,122,700 - 37,132,011 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl637,122,349 - 37,132,010 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1636,916,793 - 36,926,089 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0636,809,975 - 36,819,274 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0637,211,223 - 37,220,526 (+)NCBIUU_Cfam_GSD_1.0
NMRAL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38164,461,694 - 4,476,337 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl164,461,691 - 4,495,763 (-)EnsemblGRCh38hg38GRCh38
GRCh37164,511,695 - 4,526,338 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36164,451,696 - 4,464,893 (-)NCBINCBI36Build 36hg18NCBI36
Celera164,720,601 - 4,733,802 (-)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef164,479,007 - 4,492,208 (-)NCBIHuRef
CHM1_1164,511,637 - 4,524,834 (-)NCBICHM1_1
T2T-CHM13v2.0164,491,230 - 4,505,858 (-)NCBIT2T-CHM13v2.0
Nmral1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39164,529,181 - 4,537,220 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl164,527,923 - 4,537,220 (-)EnsemblGRCm39 Ensembl
GRCm38164,711,317 - 4,719,356 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl164,710,059 - 4,719,356 (-)EnsemblGRCm38mm10GRCm38
MGSCv37164,711,317 - 4,719,059 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36164,626,545 - 4,634,287 (-)NCBIMGSCv36mm8
Celera165,341,998 - 5,349,740 (-)NCBICelera
Cytogenetic Map16A1NCBI
cM Map162.46NCBI
Nmral1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81011,348,080 - 11,356,621 (+)NCBIGRCr8
mRatBN7.21010,841,693 - 10,850,199 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1010,841,799 - 10,850,192 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1015,550,719 - 15,558,927 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01015,039,543 - 15,047,750 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01010,708,854 - 10,717,022 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01011,045,924 - 11,055,154 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1011,046,024 - 11,055,158 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0109,811,282 - 9,820,512 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41010,971,190 - 10,979,379 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11010,970,969 - 10,979,379 (+)NCBI
Celera109,804,340 - 9,812,522 (+)NCBICelera
Cytogenetic Map10q12NCBI
Nmral1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544212,959,931 - 12,967,282 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544212,960,559 - 12,967,186 (+)NCBIChiLan1.0ChiLan1.0
NMRAL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2184,991,565 - 5,004,451 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1168,781,306 - 8,794,166 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0163,386,842 - 3,399,729 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1164,555,519 - 4,560,209 (-)NCBIpanpan1.1PanPan1.1panPan2
Nmral1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344106,668,749 - 106,673,646 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493669435,903 - 44,926 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493669433,738 - 40,716 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NMRAL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl337,871,995 - 37,881,113 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1337,871,868 - 37,879,373 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2338,926,722 - 38,934,140 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NMRAL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.154,142,965 - 4,164,217 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl54,143,051 - 4,163,391 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606826,522,657 - 26,543,259 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nmral1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248242,262,961 - 2,272,376 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248242,243,184 - 2,272,379 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NMRAL1
78 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 17 1 6 1 6 12 8 7 1
Low 5 5 5 6 3 5
Below cutoff

Sequence


RefSeq Acc Id: ENSCAFT00000030493   ⟹   ENSCAFP00000028333
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl636,916,787 - 36,927,578 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845001337   ⟹   ENSCAFP00845001030
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl637,122,349 - 37,132,010 (+)Ensembl
RefSeq Acc Id: XM_022420128   ⟹   XP_022275836
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1636,918,303 - 36,927,414 (+)NCBI
Dog10K_Boxer_Tasha638,246,584 - 38,255,718 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038479301   ⟹   XP_038335229
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1636,916,799 - 36,926,089 (+)NCBI
RefSeq Acc Id: XM_038479302   ⟹   XP_038335230
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1636,916,793 - 36,925,925 (+)NCBI
RefSeq Acc Id: XM_038540548   ⟹   XP_038396476
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0637,211,229 - 37,220,526 (+)NCBI
RefSeq Acc Id: XM_038540549   ⟹   XP_038396477
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0637,211,223 - 37,220,362 (+)NCBI
RefSeq Acc Id: XM_038604645   ⟹   XP_038460573
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0636,809,981 - 36,819,274 (+)NCBI
RefSeq Acc Id: XM_038604646   ⟹   XP_038460574
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0636,809,975 - 36,819,110 (+)NCBI
RefSeq Acc Id: XM_038669334   ⟹   XP_038525262
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0637,122,705 - 37,132,011 (+)NCBI
RefSeq Acc Id: XM_038669335   ⟹   XP_038525263
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0637,122,700 - 37,131,847 (+)NCBI
RefSeq Acc Id: XM_547146   ⟹   XP_547146
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1636,918,308 - 36,927,581 (+)NCBI
Dog10K_Boxer_Tasha638,246,590 - 38,255,882 (+)NCBI
Sequence:
RefSeq Acc Id: XP_547146   ⟸   XM_547146
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022275836   ⟸   XM_022420128
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSCAFP00000028333   ⟸   ENSCAFT00000030493
RefSeq Acc Id: XP_038335230   ⟸   XM_038479302
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038335229   ⟸   XM_038479301
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038460574   ⟸   XM_038604646
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038460573   ⟸   XM_038604645
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038525263   ⟸   XM_038669335
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038525262   ⟸   XM_038669334
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038396477   ⟸   XM_038540549
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038396476   ⟸   XM_038540548
- Peptide Label: isoform X1
RefSeq Acc Id: ENSCAFP00845001030   ⟸   ENSCAFT00845001337
Protein Domains
NmrA-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000019210 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040014527 UniProtKB/TrEMBL
  ENSCAFG00845000808 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000030493.5 UniProtKB/TrEMBL
  ENSCAFT00040026777.1 UniProtKB/TrEMBL
  ENSCAFT00845001337.1 UniProtKB/TrEMBL
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
  UDP-galactose 4-epimerase, domain 1 UniProtKB/TrEMBL
InterPro NAD(P)-bd_dom_sf UniProtKB/TrEMBL
  NmrA-like UniProtKB/TrEMBL
NCBI Gene NMRAL1 ENTREZGENE
PANTHER NITROGEN METABOLITE REPRESSION PROTEIN NMRA FAMILY MEMBER UniProtKB/TrEMBL
  NMRA-LIKE FAMILY DOMAIN-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
Pfam NmrA UniProtKB/TrEMBL
Superfamily-SCOP SSF51735 UniProtKB/TrEMBL
UniProt A0A8C0SP40_CANLF UniProtKB/TrEMBL
  A0A8I3MCI5_CANLF UniProtKB/TrEMBL
UniProt Secondary A0A8P0SMU4 UniProtKB/TrEMBL
VGNC ID VGNC:103694 ENTREZGENE