GATAD2A (GATA zinc finger domain containing 2A) - Rat Genome Database

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Gene: GATAD2A (GATA zinc finger domain containing 2A) Canis lupus familiaris
Analyze
Symbol: GATAD2A
Name: GATA zinc finger domain containing 2A
RGD ID: 12152431
Description: ENCODES a protein that exhibits protein-macromolecule adaptor activity (inferred); sequence-specific DNA binding (inferred); INVOLVED IN anterior neuropore closure (ortholog); blood vessel development (ortholog); embryonic body morphogenesis (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH genetic disease (ortholog); Genetic Predisposition to Disease (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleoplasm (inferred); nucleus (inferred); NuRD complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: transcriptional repressor p66-alpha
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12043,736,471 - 43,853,505 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2043,739,849 - 43,846,370 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2043,654,024 - 43,770,694 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02044,224,437 - 44,341,415 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2044,226,432 - 44,334,257 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12043,462,030 - 43,578,906 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02043,871,448 - 43,988,560 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02044,147,086 - 44,263,794 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
nucleoplasm  (IEA)
nucleus  (IEA)
NuRD complex  (IEA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
GATAD2A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12043,736,471 - 43,853,505 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2043,739,849 - 43,846,370 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2043,654,024 - 43,770,694 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02044,224,437 - 44,341,415 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2044,226,432 - 44,334,257 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12043,462,030 - 43,578,906 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02043,871,448 - 43,988,560 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02044,147,086 - 44,263,794 (-)NCBIUU_Cfam_GSD_1.0
GATAD2A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381919,385,843 - 19,508,932 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1919,385,826 - 19,508,932 (+)EnsemblGRCh38hg38GRCh38
GRCh371919,496,652 - 19,619,741 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361919,430,401 - 19,478,789 (+)NCBINCBI36Build 36hg18NCBI36
Celera1919,400,702 - 19,523,801 (+)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1919,058,971 - 19,181,846 (+)NCBIHuRef
CHM1_11919,497,349 - 19,620,430 (+)NCBICHM1_1
T2T-CHM13v2.01919,523,327 - 19,646,416 (+)NCBIT2T-CHM13v2.0
Gatad2a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39870,359,719 - 70,450,093 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl870,359,726 - 70,449,034 (-)EnsemblGRCm39 Ensembl
GRCm38869,907,069 - 69,996,402 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl869,907,076 - 69,996,384 (-)EnsemblGRCm38mm10GRCm38
MGSCv37872,430,968 - 72,520,278 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36872,837,459 - 72,925,353 (-)NCBIMGSCv36mm8
Celera872,466,875 - 72,555,282 (-)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map834.06NCBI
Gatad2a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81619,463,500 - 19,553,497 (+)NCBIGRCr8
mRatBN7.21619,429,578 - 19,520,320 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1619,429,578 - 19,519,587 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1619,469,767 - 19,560,312 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01620,601,537 - 20,698,495 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01619,522,741 - 19,613,295 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01621,177,793 - 21,267,768 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1621,178,138 - 21,268,504 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01621,093,916 - 21,184,843 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,913,558 - 20,004,379 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11619,994,115 - 20,003,487 (+)NCBI
Celera1619,618,575 - 19,708,686 (+)NCBICelera
Cytogenetic Map16p14NCBI
Gatad2a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555242,439,594 - 2,506,538 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555242,439,594 - 2,506,539 (-)NCBIChiLan1.0ChiLan1.0
GATAD2A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22024,246,369 - 24,371,310 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11923,254,888 - 23,377,728 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01918,824,615 - 18,947,351 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11919,824,575 - 19,942,670 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1919,873,119 - 19,942,670 (+)Ensemblpanpan1.1panPan2
Gatad2a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118202,409,830 - 202,525,336 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365961,958,844 - 2,074,707 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365961,958,961 - 2,074,471 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GATAD2A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl258,415,750 - 58,517,162 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1258,415,749 - 58,517,308 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2258,210,083 - 58,282,240 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GATAD2A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1617,847,310 - 17,971,219 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl617,847,307 - 17,971,220 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660741,332,270 - 1,458,474 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gatad2a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249082,230,581 - 2,308,579 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249082,213,661 - 2,305,877 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GATAD2A
757 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 1 13 5 6 5 8 9 1
Low 4 5 9 6 1 6 6 7 1 5
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005632652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005632653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022406820 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022406821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022406822 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022406823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038428056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038454978 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038503707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038503708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038503709 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038503710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038503711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038503712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038503713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038503714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038503715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038566731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038566732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038566733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038566734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038566735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038566736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038566737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038566738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038566739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038630873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038630874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038630875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038630876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038630877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038630878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038630879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038630880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038630881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000291 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000022678   ⟹   ENSCAFP00000021062
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2043,739,849 - 43,805,503 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000062623   ⟹   ENSCAFP00000047971
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2043,739,849 - 43,846,370 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000074609   ⟹   ENSCAFP00000057451
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2043,739,849 - 43,805,503 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845025752   ⟹   ENSCAFP00845020290
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2044,226,432 - 44,334,257 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845025801   ⟹   ENSCAFP00845020328
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2044,226,433 - 44,268,880 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845025813   ⟹   ENSCAFP00845020338
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2044,226,437 - 44,334,257 (-)Ensembl
RefSeq Acc Id: XM_005632652   ⟹   XP_005632709
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12043,736,471 - 43,846,360 (-)NCBI
Dog10K_Boxer_Tasha2043,654,024 - 43,763,549 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005632653   ⟹   XP_005632710
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12043,736,471 - 43,812,575 (-)NCBI
Dog10K_Boxer_Tasha2043,654,024 - 43,730,136 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022406820   ⟹   XP_022262528
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12043,736,471 - 43,802,527 (-)NCBI
Dog10K_Boxer_Tasha2043,654,024 - 43,720,087 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022406821   ⟹   XP_022262529
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12043,736,471 - 43,802,527 (-)NCBI
Dog10K_Boxer_Tasha2043,654,024 - 43,720,087 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022406822   ⟹   XP_022262530
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12043,736,471 - 43,853,505 (-)NCBI
Dog10K_Boxer_Tasha2043,654,024 - 43,770,694 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022406823   ⟹   XP_022262531
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12043,736,471 - 43,805,509 (-)NCBI
Dog10K_Boxer_Tasha2043,654,024 - 43,723,069 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038428048   ⟹   XP_038283976
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02044,224,437 - 44,290,615 (-)NCBI
RefSeq Acc Id: XM_038428049   ⟹   XP_038283977
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02044,224,437 - 44,290,615 (-)NCBI
RefSeq Acc Id: XM_038428050   ⟹   XP_038283978
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02044,224,437 - 44,290,615 (-)NCBI
RefSeq Acc Id: XM_038428051   ⟹   XP_038283979
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02044,224,437 - 44,290,615 (-)NCBI
RefSeq Acc Id: XM_038428052   ⟹   XP_038283980
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02044,224,437 - 44,334,247 (-)NCBI
RefSeq Acc Id: XM_038428053   ⟹   XP_038283981
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02044,224,437 - 44,300,669 (-)NCBI
RefSeq Acc Id: XM_038428054   ⟹   XP_038283982
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02044,224,437 - 44,320,189 (-)NCBI
RefSeq Acc Id: XM_038428055   ⟹   XP_038283983
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02044,224,437 - 44,341,415 (-)NCBI
RefSeq Acc Id: XM_038428056   ⟹   XP_038283984
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02044,224,437 - 44,293,597 (-)NCBI
RefSeq Acc Id: XM_038454976   ⟹   XP_038310904
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2043,654,024 - 43,720,087 (-)NCBI
RefSeq Acc Id: XM_038454977   ⟹   XP_038310905
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2043,654,024 - 43,720,087 (-)NCBI
RefSeq Acc Id: XM_038454978   ⟹   XP_038310906
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2043,654,024 - 43,749,639 (-)NCBI
RefSeq Acc Id: XM_038503707   ⟹   XP_038359635
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12043,462,030 - 43,528,091 (-)NCBI
RefSeq Acc Id: XM_038503708   ⟹   XP_038359636
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12043,462,030 - 43,528,091 (-)NCBI
RefSeq Acc Id: XM_038503709   ⟹   XP_038359637
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12043,462,030 - 43,528,091 (-)NCBI
RefSeq Acc Id: XM_038503710   ⟹   XP_038359638
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12043,462,030 - 43,528,091 (-)NCBI
RefSeq Acc Id: XM_038503711   ⟹   XP_038359639
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12043,462,030 - 43,571,736 (-)NCBI
RefSeq Acc Id: XM_038503712   ⟹   XP_038359640
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12043,462,030 - 43,538,328 (-)NCBI
RefSeq Acc Id: XM_038503713   ⟹   XP_038359641
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12043,462,030 - 43,557,852 (-)NCBI
RefSeq Acc Id: XM_038503714   ⟹   XP_038359642
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12043,462,030 - 43,578,906 (-)NCBI
RefSeq Acc Id: XM_038503715   ⟹   XP_038359643
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12043,462,030 - 43,531,072 (-)NCBI
RefSeq Acc Id: XM_038566731   ⟹   XP_038422659
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02044,147,086 - 44,213,172 (-)NCBI
RefSeq Acc Id: XM_038566732   ⟹   XP_038422660
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02044,147,086 - 44,213,172 (-)NCBI
RefSeq Acc Id: XM_038566733   ⟹   XP_038422661
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02044,147,086 - 44,213,172 (-)NCBI
RefSeq Acc Id: XM_038566734   ⟹   XP_038422662
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02044,147,086 - 44,213,172 (-)NCBI
RefSeq Acc Id: XM_038566735   ⟹   XP_038422663
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02044,147,086 - 44,256,648 (-)NCBI
RefSeq Acc Id: XM_038566736   ⟹   XP_038422664
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02044,147,086 - 44,223,224 (-)NCBI
RefSeq Acc Id: XM_038566737   ⟹   XP_038422665
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02044,147,086 - 44,242,735 (-)NCBI
RefSeq Acc Id: XM_038566738   ⟹   XP_038422666
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02044,147,086 - 44,263,794 (-)NCBI
RefSeq Acc Id: XM_038566739   ⟹   XP_038422667
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02044,147,086 - 44,216,155 (-)NCBI
RefSeq Acc Id: XM_038630873   ⟹   XP_038486801
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02043,871,448 - 43,937,765 (-)NCBI
RefSeq Acc Id: XM_038630874   ⟹   XP_038486802
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02043,871,448 - 43,937,765 (-)NCBI
RefSeq Acc Id: XM_038630875   ⟹   XP_038486803
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02043,871,448 - 43,937,765 (-)NCBI
RefSeq Acc Id: XM_038630876   ⟹   XP_038486804
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02043,871,448 - 43,937,765 (-)NCBI
RefSeq Acc Id: XM_038630877   ⟹   XP_038486805
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02043,871,448 - 43,981,415 (-)NCBI
RefSeq Acc Id: XM_038630878   ⟹   XP_038486806
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02043,871,448 - 43,948,020 (-)NCBI
RefSeq Acc Id: XM_038630879   ⟹   XP_038486807
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02043,871,448 - 43,967,508 (-)NCBI
RefSeq Acc Id: XM_038630880   ⟹   XP_038486808
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02043,871,448 - 43,988,560 (-)NCBI
RefSeq Acc Id: XM_038630881   ⟹   XP_038486809
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02043,871,448 - 43,940,746 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005632709 (Get FASTA)   NCBI Sequence Viewer  
  XP_005632710 (Get FASTA)   NCBI Sequence Viewer  
  XP_022262528 (Get FASTA)   NCBI Sequence Viewer  
  XP_022262529 (Get FASTA)   NCBI Sequence Viewer  
  XP_022262530 (Get FASTA)   NCBI Sequence Viewer  
  XP_022262531 (Get FASTA)   NCBI Sequence Viewer  
  XP_038283976 (Get FASTA)   NCBI Sequence Viewer  
  XP_038283977 (Get FASTA)   NCBI Sequence Viewer  
  XP_038283978 (Get FASTA)   NCBI Sequence Viewer  
  XP_038283979 (Get FASTA)   NCBI Sequence Viewer  
  XP_038283980 (Get FASTA)   NCBI Sequence Viewer  
  XP_038283981 (Get FASTA)   NCBI Sequence Viewer  
  XP_038283982 (Get FASTA)   NCBI Sequence Viewer  
  XP_038283983 (Get FASTA)   NCBI Sequence Viewer  
  XP_038283984 (Get FASTA)   NCBI Sequence Viewer  
  XP_038310904 (Get FASTA)   NCBI Sequence Viewer  
  XP_038310905 (Get FASTA)   NCBI Sequence Viewer  
  XP_038310906 (Get FASTA)   NCBI Sequence Viewer  
  XP_038359635 (Get FASTA)   NCBI Sequence Viewer  
  XP_038359636 (Get FASTA)   NCBI Sequence Viewer  
  XP_038359637 (Get FASTA)   NCBI Sequence Viewer  
  XP_038359638 (Get FASTA)   NCBI Sequence Viewer  
  XP_038359639 (Get FASTA)   NCBI Sequence Viewer  
  XP_038359640 (Get FASTA)   NCBI Sequence Viewer  
  XP_038359641 (Get FASTA)   NCBI Sequence Viewer  
  XP_038359642 (Get FASTA)   NCBI Sequence Viewer  
  XP_038359643 (Get FASTA)   NCBI Sequence Viewer  
  XP_038422659 (Get FASTA)   NCBI Sequence Viewer  
  XP_038422660 (Get FASTA)   NCBI Sequence Viewer  
  XP_038422661 (Get FASTA)   NCBI Sequence Viewer  
  XP_038422662 (Get FASTA)   NCBI Sequence Viewer  
  XP_038422663 (Get FASTA)   NCBI Sequence Viewer  
  XP_038422664 (Get FASTA)   NCBI Sequence Viewer  
  XP_038422665 (Get FASTA)   NCBI Sequence Viewer  
  XP_038422666 (Get FASTA)   NCBI Sequence Viewer  
  XP_038422667 (Get FASTA)   NCBI Sequence Viewer  
  XP_038486801 (Get FASTA)   NCBI Sequence Viewer  
  XP_038486802 (Get FASTA)   NCBI Sequence Viewer  
  XP_038486803 (Get FASTA)   NCBI Sequence Viewer  
  XP_038486804 (Get FASTA)   NCBI Sequence Viewer  
  XP_038486805 (Get FASTA)   NCBI Sequence Viewer  
  XP_038486806 (Get FASTA)   NCBI Sequence Viewer  
  XP_038486807 (Get FASTA)   NCBI Sequence Viewer  
  XP_038486808 (Get FASTA)   NCBI Sequence Viewer  
  XP_038486809 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000021062.4
  ENSCAFP00000047971.2
  ENSCAFP00030020378.1
  ENSCAFP00040033758.1
  ENSCAFP00040033817.1
  ENSCAFP00040033896.1
  ENSCAFP00040033950.1
  ENSCAFP00845020290
  ENSCAFP00845020290.1
  ENSCAFP00845020328
  ENSCAFP00845020328.1
  ENSCAFP00845020338.1
Reference Protein Sequences
RefSeq Acc Id: XP_005632709   ⟸   XM_005632652
- Peptide Label: isoform X5
- UniProtKB: A0A8C0N2C4 (UniProtKB/TrEMBL),   A0A8C0KJN0 (UniProtKB/TrEMBL),   A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005632710   ⟸   XM_005632653
- Peptide Label: isoform X5
- UniProtKB: A0A8C0N2C4 (UniProtKB/TrEMBL),   A0A8C0KJN0 (UniProtKB/TrEMBL),   A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022262530   ⟸   XM_022406822
- Peptide Label: isoform X5
- UniProtKB: A0A8C0N2C4 (UniProtKB/TrEMBL),   A0A8C0KJN0 (UniProtKB/TrEMBL),   A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022262531   ⟸   XM_022406823
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SIW3 (UniProtKB/TrEMBL),   A0A8I3NVZ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022262529   ⟸   XM_022406821
- Peptide Label: isoform X2
- UniProtKB: A0A8I3NVZ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022262528   ⟸   XM_022406820
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SIW3 (UniProtKB/TrEMBL),   A0A8I3NVZ3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000057451   ⟸   ENSCAFT00000074609
RefSeq Acc Id: ENSCAFP00000047971   ⟸   ENSCAFT00000062623
RefSeq Acc Id: ENSCAFP00000021062   ⟸   ENSCAFT00000022678
RefSeq Acc Id: XP_038359642   ⟸   XM_038503714
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038359639   ⟸   XM_038503711
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038359641   ⟸   XM_038503713
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038359640   ⟸   XM_038503712
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038359643   ⟸   XM_038503715
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038359638   ⟸   XM_038503710
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038359636   ⟸   XM_038503708
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038359637   ⟸   XM_038503709
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038359635   ⟸   XM_038503707
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038486808   ⟸   XM_038630880
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038486805   ⟸   XM_038630877
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038486807   ⟸   XM_038630879
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038486806   ⟸   XM_038630878
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038486809   ⟸   XM_038630881
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038486804   ⟸   XM_038630876
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038486802   ⟸   XM_038630874
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038486803   ⟸   XM_038630875
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038486801   ⟸   XM_038630873
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038283983   ⟸   XM_038428055
- Peptide Label: isoform X5
- UniProtKB: A0A8C0N2C4 (UniProtKB/TrEMBL),   A0A8C0KJN0 (UniProtKB/TrEMBL),   A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038283980   ⟸   XM_038428052
- Peptide Label: isoform X5
- UniProtKB: A0A8C0N2C4 (UniProtKB/TrEMBL),   A0A8C0KJN0 (UniProtKB/TrEMBL),   A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038283982   ⟸   XM_038428054
- Peptide Label: isoform X5
- UniProtKB: A0A8C0N2C4 (UniProtKB/TrEMBL),   A0A8C0KJN0 (UniProtKB/TrEMBL),   A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038283981   ⟸   XM_038428053
- Peptide Label: isoform X5
- UniProtKB: A0A8C0N2C4 (UniProtKB/TrEMBL),   A0A8C0KJN0 (UniProtKB/TrEMBL),   A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038283984   ⟸   XM_038428056
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SIW3 (UniProtKB/TrEMBL),   A0A8I3NVZ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038283979   ⟸   XM_038428051
- Peptide Label: isoform X4
- UniProtKB: A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038283977   ⟸   XM_038428049
- Peptide Label: isoform X2
- UniProtKB: A0A8I3NVZ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038283978   ⟸   XM_038428050
- Peptide Label: isoform X3
- UniProtKB: A0A8P0T0U4 (UniProtKB/TrEMBL),   A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038283976   ⟸   XM_038428048
- Peptide Label: isoform X1
- UniProtKB: A0A8P0SIW3 (UniProtKB/TrEMBL),   A0A8I3NVZ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038310906   ⟸   XM_038454978
- Peptide Label: isoform X5
- UniProtKB: A0A8C0N2C4 (UniProtKB/TrEMBL),   A0A8C0KJN0 (UniProtKB/TrEMBL),   A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038310905   ⟸   XM_038454977
- Peptide Label: isoform X4
- UniProtKB: A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038310904   ⟸   XM_038454976
- Peptide Label: isoform X3
- UniProtKB: A0A8P0T0U4 (UniProtKB/TrEMBL),   A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038422666   ⟸   XM_038566738
- Peptide Label: isoform X5
- UniProtKB: A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0KJN0 (UniProtKB/TrEMBL),   A0A8C0N2C4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038422663   ⟸   XM_038566735
- Peptide Label: isoform X5
- UniProtKB: A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0KJN0 (UniProtKB/TrEMBL),   A0A8C0N2C4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038422665   ⟸   XM_038566737
- Peptide Label: isoform X5
- UniProtKB: A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0KJN0 (UniProtKB/TrEMBL),   A0A8C0N2C4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038422664   ⟸   XM_038566736
- Peptide Label: isoform X5
- UniProtKB: A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0KJN0 (UniProtKB/TrEMBL),   A0A8C0N2C4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038422667   ⟸   XM_038566739
- Peptide Label: isoform X1
- UniProtKB: A0A8I3NVZ3 (UniProtKB/TrEMBL),   A0A8P0SIW3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038422662   ⟸   XM_038566734
- Peptide Label: isoform X4
- UniProtKB: A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038422660   ⟸   XM_038566732
- Peptide Label: isoform X2
- UniProtKB: A0A8I3NVZ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038422661   ⟸   XM_038566733
- Peptide Label: isoform X3
- UniProtKB: A0A8C0KIH4 (UniProtKB/TrEMBL),   A0A8C0TF89 (UniProtKB/TrEMBL),   A0A8P0T0U4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038422659   ⟸   XM_038566731
- Peptide Label: isoform X1
- UniProtKB: A0A8I3NVZ3 (UniProtKB/TrEMBL),   A0A8P0SIW3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845020328   ⟸   ENSCAFT00845025801
RefSeq Acc Id: ENSCAFP00845020338   ⟸   ENSCAFT00845025813
RefSeq Acc Id: ENSCAFP00845020290   ⟸   ENSCAFT00845025752
Protein Domains
GATA-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000014267 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030012621 UniProtKB/TrEMBL
  ENSCAFG00040020895 UniProtKB/TrEMBL
  ENSCAFG00845014383 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000022678.5 UniProtKB/TrEMBL
  ENSCAFT00000062623.2 UniProtKB/TrEMBL
  ENSCAFT00030023373.1 UniProtKB/TrEMBL
  ENSCAFT00040038703.1 UniProtKB/TrEMBL
  ENSCAFT00040038768.1 UniProtKB/TrEMBL
  ENSCAFT00040038868.1 UniProtKB/TrEMBL
  ENSCAFT00040038930.1 UniProtKB/TrEMBL
  ENSCAFT00845025752 ENTREZGENE
  ENSCAFT00845025752.1 UniProtKB/TrEMBL
  ENSCAFT00845025801 ENTREZGENE
  ENSCAFT00845025801.1 UniProtKB/TrEMBL
  ENSCAFT00845025813.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.250.1650 UniProtKB/TrEMBL
InterPro P66 UniProtKB/TrEMBL
  P66_CC UniProtKB/TrEMBL
  Znf_GATA UniProtKB/TrEMBL
KEGG Report cfa:484806 UniProtKB/TrEMBL
NCBI Gene GATAD2A ENTREZGENE
PANTHER PTHR13455 UniProtKB/TrEMBL
  TRANSCRIPTIONAL REPRESSOR P66-ALPHA UniProtKB/TrEMBL
Pfam GATA UniProtKB/TrEMBL
  P66_CC UniProtKB/TrEMBL
PROSITE GATA_ZN_FINGER_1 UniProtKB/TrEMBL
  GATA_ZN_FINGER_2 UniProtKB/TrEMBL
UniProt A0A8C0KIH4 ENTREZGENE
  A0A8C0KJN0 ENTREZGENE
  A0A8C0N2C4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0T9V0_CANLF UniProtKB/TrEMBL
  A0A8C0TF89 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TFI9_CANLF UniProtKB/TrEMBL
  A0A8I3NTF9_CANLF UniProtKB/TrEMBL
  A0A8I3NVZ3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NW35_CANLF UniProtKB/TrEMBL
  A0A8P0SIW3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0T0U4 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:41126 ENTREZGENE