FGFRL1 (fibroblast growth factor receptor like 1) - Rat Genome Database

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Gene: FGFRL1 (fibroblast growth factor receptor like 1) Canis lupus familiaris
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Symbol: FGFRL1
Name: fibroblast growth factor receptor like 1
RGD ID: 12149011
Description: ENCODES a protein that exhibits fibroblast growth factor binding (inferred); fibroblast growth factor receptor activity (inferred); heparin binding (inferred); INVOLVED IN diaphragm development (ortholog); heart valve morphogenesis (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH cherubism (ortholog); congenital diaphragmatic hernia (ortholog); Contracture (ortholog); FOUND IN cell-cell contact zone (inferred); Golgi apparatus (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: fibroblast growth factor receptor-like 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1391,499,088 - 91,508,982 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha393,964,415 - 93,975,188 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0392,495,931 - 92,506,701 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl392,495,751 - 92,506,687 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1391,669,487 - 91,680,257 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0391,723,012 - 91,733,089 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0392,106,190 - 92,116,970 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
FGFRL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1391,499,088 - 91,508,982 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha393,964,415 - 93,975,188 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0392,495,931 - 92,506,701 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl392,495,751 - 92,506,687 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1391,669,487 - 91,680,257 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0391,723,012 - 91,733,089 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0392,106,190 - 92,116,970 (-)NCBIUU_Cfam_GSD_1.0
FGFRL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3841,010,212 - 1,026,898 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl41,009,936 - 1,026,898 (+)EnsemblGRCh38hg38GRCh38
GRCh3741,005,414 - 1,020,686 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364995,610 - 1,010,686 (+)NCBINCBI36Build 36hg18NCBI36
Build 344996,081 - 1,010,515NCBI
Celera4943,223 - 957,920 (+)NCBICelera
Cytogenetic Map4p16.3NCBI
HuRef4977,509 - 991,567 (+)NCBIHuRef
CHM1_141,004,941 - 1,020,476 (+)NCBICHM1_1
T2T-CHM13v2.041,008,259 - 1,024,943 (+)NCBIT2T-CHM13v2.0
Fgfrl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395108,842,051 - 108,854,816 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5108,840,248 - 108,854,790 (+)EnsemblGRCm39 Ensembl
GRCm385108,694,229 - 108,706,950 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5108,692,382 - 108,706,924 (+)EnsemblGRCm38mm10GRCm38
MGSCv375109,123,248 - 109,135,969 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365108,934,804 - 108,947,200 (+)NCBIMGSCv36mm8
Celera5105,826,033 - 105,829,700 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map553.24NCBI
Fgfrl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8141,154,275 - 1,166,334 (-)NCBIGRCr8
mRatBN7.2141,009,863 - 1,022,620 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl141,009,786 - 1,021,928 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx14909,702 - 921,759 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0142,211,479 - 2,223,536 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.014908,169 - 920,226 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0142,020,110 - 2,032,169 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl142,018,500 - 2,032,593 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0142,015,651 - 2,027,710 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4141,550,894 - 1,562,953 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1141,550,893 - 1,562,953 (-)NCBI
Celera141,049,319 - 1,061,378 (-)NCBICelera
Cytogenetic Map14p22NCBI
Fgfrl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955514497,573 - 509,811 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955514499,526 - 509,208 (+)NCBIChiLan1.0ChiLan1.0
FGFRL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v231,336,249 - 1,355,964 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan141,302,976 - 1,322,669 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v041,125,623 - 1,142,884 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.141,045,581 - 1,059,936 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl41,045,583 - 1,059,936 (+)Ensemblpanpan1.1panPan2
Fgfrl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528568,475,781 - 68,487,879 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647722,177,457 - 22,189,655 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647722,177,473 - 22,189,554 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FGFRL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl8365,181 - 378,375 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.18365,367 - 378,384 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
FGFRL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12747,752,316 - 47,766,771 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2747,750,626 - 47,755,929 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660514,134,711 - 4,148,364 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fgfrl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475526,135,505 - 26,144,325 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475526,134,957 - 26,145,746 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in FGFRL1
196 total Variants

Expression


Sequence


RefSeq Acc Id: ENSCAFT00845001677   ⟹   ENSCAFP00845001324
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl392,495,751 - 92,506,687 (-)Ensembl
RefSeq Acc Id: XM_038472637   ⟹   XP_038328565
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1391,669,487 - 91,680,257 (-)NCBI
RefSeq Acc Id: XM_038482633   ⟹   XP_038338561
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha393,964,415 - 93,975,188 (-)NCBI
RefSeq Acc Id: XM_038533628   ⟹   XP_038389556
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0392,106,190 - 92,116,970 (-)NCBI
RefSeq Acc Id: XM_038597915   ⟹   XP_038453843
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0391,723,012 - 91,733,089 (-)NCBI
RefSeq Acc Id: XM_038662137   ⟹   XP_038518065
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0392,495,931 - 92,506,701 (-)NCBI
RefSeq Acc Id: XP_038328565   ⟸   XM_038472637
RefSeq Acc Id: XP_038453843   ⟸   XM_038597915
RefSeq Acc Id: XP_038518065   ⟸   XM_038662137
- UniProtKB: A0A8C0PXG8 (UniProtKB/TrEMBL),   A0A8C0LX20 (UniProtKB/TrEMBL),   A0A8I3MXL0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038338561   ⟸   XM_038482633
- UniProtKB: A0A8C0PXG8 (UniProtKB/TrEMBL),   A0A8C0LX20 (UniProtKB/TrEMBL),   A0A8I3MXL0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038389556   ⟸   XM_038533628
- UniProtKB: A0A8C0LX20 (UniProtKB/TrEMBL),   A0A8C0PXG8 (UniProtKB/TrEMBL),   A0A8I3MXL0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845001324   ⟸   ENSCAFT00845001677
Protein Domains
Ig-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000016699 UniProtKB/TrEMBL
  ENSCAFG00030000525 UniProtKB/TrEMBL
  ENSCAFG00040003411 UniProtKB/TrEMBL
  ENSCAFG00845000982 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000026440.6 UniProtKB/TrEMBL
  ENSCAFT00030000867.1 UniProtKB/TrEMBL
  ENSCAFT00030000881.1 UniProtKB/TrEMBL
  ENSCAFT00030000886.1 UniProtKB/TrEMBL
  ENSCAFT00040006491.1 UniProtKB/TrEMBL
  ENSCAFT00040006499.1 UniProtKB/TrEMBL
  ENSCAFT00845001677 ENTREZGENE
  ENSCAFT00845001677.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_I-set UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/TrEMBL
NCBI Gene FGFRL1 ENTREZGENE
PANTHER FIBROBLAST GROWTH FACTOR RECEPTOR UniProtKB/TrEMBL
  FIBROBLAST GROWTH FACTOR RECEPTOR-LIKE 1 UniProtKB/TrEMBL
Pfam I-set UniProtKB/TrEMBL
  Ig_3 UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
SMART IGc2 UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt A0A8C0LSA7_CANLF UniProtKB/TrEMBL
  A0A8C0LX20 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0LYE0_CANLF UniProtKB/TrEMBL
  A0A8C0PXG8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RX39_CANLF UniProtKB/TrEMBL
  A0A8I3MXL0 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:40862 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-06-20 FGFRL1  fibroblast growth factor receptor like 1    fibroblast growth factor receptor-like 1  Symbol and/or name change 5135510 APPROVED