PPP1R21 (protein phosphatase 1 regulatory subunit 21)

Gene: PPP1R21 (protein phosphatase 1 regulatory subunit 21) Canis lupus familiaris

Analyze

Symbol:

PPP1R21 (Ensembl: STON1)

Name:

protein phosphatase 1 regulatory subunit 21

RGD ID:

12146118

Description:

ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, FACIAL DYSMORPHISM, AND BRAIN ABNORMALITIES (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN early endosome (inferred); endosome (inferred); membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

CCDC128; coiled-coil domain containing 128; KLRAQ motif containing 1; KLRAQ1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	50,350,521 - 50,415,803 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	50,350,545 - 50,415,732 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	50,204,226 - 50,269,500 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	51,229,673 - 51,295,006 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	51,229,729 - 51,295,065 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	50,929,749 - 50,995,045 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	51,216,609 - 51,281,750 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	51,405,081 - 51,470,229 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, FACIAL DYSMORPHISM, AND BRAIN ABNORMALITIES (ISO)

Neurodevelopmental Disorders (ISO)

Pitt-Hopkins-like syndrome 2 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

early endosome (IEA)

endosome (IEA)

membrane (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

PPP1R21
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	50,350,521 - 50,415,803 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	50,350,545 - 50,415,732 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	50,204,226 - 50,269,500 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	51,229,673 - 51,295,006 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	51,229,729 - 51,295,065 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	50,929,749 - 50,995,045 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	51,216,609 - 51,281,750 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	51,405,081 - 51,470,229 (+)	NCBI		UU_Cfam_GSD_1.0

PPP1R21
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	48,440,766 - 48,515,386 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	48,440,598 - 48,515,391 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	48,667,905 - 48,742,525 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	48,521,412 - 48,596,029 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	2	48,507,697 - 48,582,287 (+)	NCBI		Celera
Cytogenetic Map	2	p16.3	NCBI
HuRef	2	48,403,647 - 48,478,111 (+)	NCBI		HuRef
CHM1_1	2	48,598,083 - 48,672,622 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	48,446,714 - 48,521,263 (+)	NCBI		T2T-CHM13v2.0

Ppp1r21
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	88,837,552 - 88,895,795 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	88,837,546 - 88,895,795 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	88,530,124 - 88,588,367 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	88,530,118 - 88,588,367 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	88,929,464 - 88,987,707 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	88,438,587 - 88,496,691 (+)	NCBI		MGSCv36	mm8
Celera	17	92,948,195 - 93,006,786 (+)	NCBI		Celera
Cytogenetic Map	17	E4	NCBI
cM Map	17	58.02	NCBI

Ppp1r21
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	6	11,655,059 - 11,724,219 (-)	NCBI		GRCr8
mRatBN7.2	6	5,901,518 - 5,970,684 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	6	5,901,518 - 5,970,684 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	6	6,184,768 - 6,254,008 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	6	6,494,144 - 6,563,384 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	6	6,021,317 - 6,090,561 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	6	12,253,788 - 12,323,427 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	6	12,253,788 - 12,323,421 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	6	22,270,224 - 22,286,405 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	6	22,219,113 - 22,263,931 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	6	12,360,976 - 12,405,728 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	6	5,674,130 - 5,741,099 (-)	NCBI		Celera
Cytogenetic Map	6	q12	NCBI

Ppp1r21
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955441	15,004,888 - 15,061,967 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955441	15,002,126 - 15,061,967 (+)	NCBI	ChiLan1.0	ChiLan1.0

PPP1R21
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	12	77,862,209 - 77,936,543 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2A	77,866,179 - 77,940,513 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2A	48,568,114 - 48,642,401 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2A	49,489,967 - 49,563,464 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2A	49,489,967 - 49,563,464 (+)	Ensembl	panpan1.1		panPan2

Ppp1r21
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024406292	32,698,552 - 32,765,112 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936508	4,125,444 - 4,193,323 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936508	4,127,373 - 4,193,206 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PPP1R21
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	92,156,008 - 92,227,708 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	92,156,002 - 92,227,719 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	97,965,691 - 98,036,009 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PPP1R21
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	14	58,649,556 - 58,723,610 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	14	58,648,748 - 58,723,553 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	53,125,831 - 53,196,517 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ppp1r21
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624738	29,662,864 - 29,737,676 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624738	29,662,619 - 29,785,679 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in PPP1R21
608 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			12		3		2		12		10	2
Low	5	5	10	6	3	6	4	6		8		4
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038489239	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038551242	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038615138	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038680521	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_531815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000036478 ⟹ ENSCAFP00000031860

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	10	50,350,545 - 50,415,260 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000036481 ⟹ ENSCAFP00000031863

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	10	50,350,545 - 50,415,732 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000071993 ⟹ ENSCAFP00000045778

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	10	50,350,545 - 50,415,732 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845010181 ⟹ ENSCAFP00845007936

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	10	51,229,729 - 51,295,065 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845010197 ⟹ ENSCAFP00845007947

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	10	51,229,729 - 51,295,065 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845010279 ⟹ ENSCAFP00845008006

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	10	51,229,729 - 51,295,065 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845010346 ⟹ ENSCAFP00845008044

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	10	51,229,729 - 51,295,065 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845010402 ⟹ ENSCAFP00845008083

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	10	51,229,729 - 51,295,065 (+)	Ensembl

RefSeq Acc Id:

XM_038489239 ⟹ XP_038345167

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	10	50,929,749 - 50,995,045 (+)	NCBI

RefSeq Acc Id:

XM_038551242 ⟹ XP_038407170

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	10	51,405,081 - 51,470,229 (+)	NCBI

RefSeq Acc Id:

XM_038615138 ⟹ XP_038471066

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	10	51,216,609 - 51,281,750 (+)	NCBI

RefSeq Acc Id:

XM_038680521 ⟹ XP_038536449

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	10	51,229,673 - 51,295,006 (+)	NCBI

RefSeq Acc Id:

XM_531815 ⟹ XP_531815

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	10	50,350,521 - 50,415,803 (+)	NCBI
Dog10K_Boxer_Tasha	10	50,204,226 - 50,269,500 (+)	NCBI

Sequence:

show sequence

CCGGGCGCGTGTCTGGGGCTGGGGGCGGGGCTCGGCGGCCCGGGCAGCCGGGCCCGGACGGGGC
GGGGGAGGCCATGGCCTCGGCAGAGTTGCAGGGGAAGTACCAGAAGCTGGCTCAGGAGTACTCG
AAGCTTCGAGCCCAGAATCAGGTCCTGAAAAAAGGTGTTGTGGATGAACAGGCGAATTCTGCTG
CTTTAAAGGAACAACTGAAAATGAAGGATCAGTCATTGAGAAAGCTCCAACAGGAAATGGACAG
TTTGACATTTCGAAATCTACAGCTTGCCAAGAGGGTAGAACTACTTCAAGATGAATTGGCTCTA
AGTGAACCCCGAGGCAAGAAAAACAAGAAAAGTGGAGAATCTTCTTCTCAGTTGAGTCAAGAGC
AGAAGAGTGTCTTTGATGAAGATCTGCAAAAGAAGATAGAAGAAAATGAACGGTTGCATATACA
ATTTTTTGAAGCTGATGAGCAGCACAAGCATGTGGAAGCGGAGCTGAGGAGTCGGCTGGCCACC
CTGGAGATGGAGGCGGCCCAGCACCAAGCCGTGGTCGATGGCTTGACGCGGAAGTACATGGAAA
CTATCGAGAAACTGCAGAATGACAAGGCCAAACTAGAAGTAAAATCTCAGACTCTAGAAAAGGA
GGCCAAGGAATGTCGGCTTCGAACAGAAGAATGTCAATTACAGTTAAAGAATCTTCATGAAGAT
TTGTCAGGTAGATTAGAGGAATCCTTATCAATCATCACGGAAAAAGTACCTTTTAATGATACAA
AATATAGTCAGTATAACGCTTTGAACGTTCCACTTCACAATAGGAGACATCAGCTGAAGATGCG
GGACATTGCCGGGCAGGCCCTGGCTTTTGTTCAAGATCTTGTGACTGCTCTTCTGAATTTTCAC
ACCTATACAGAACAGAGGATTCAGATTTTTCCTATTGATTCTGCCATTGACACTATATCTCCGT
TGAATCAGAAGTTCTCACAATACCTTCATGAAAATGCGTCCTACGTCCGCCCTCTTGAGGAAGG
AATGCTTCATTTATTTGAAAGTATTACTGAGGATACTGTGACTGTCCTGGAGACAACTGTGAAA
TTGAAAACTTTTTCAGAGCATTTGACCTCTTACATATGTTTTCTTAGGAAGATTCTTCCTTATC
AGTTAAAAAGTTTAGAAGAAGAATGTGAATCGTCTCTTTGCACGTCTGCATTGAGAGCCAGGAA
TCTTGAGCTGTCTCAGGACATGAAAAAGATGACAGCTGTGTTTGAGAAGCTGCAGACTTACATC
GGTCTTCTTGCTTTGCCAAGTACAGAGCCAGATGGACTCCTTCGGACAAACTACAGTTCTGTCT
TAACAAACGTTGGTGCTGCTCTGCATGGATTTCATGATGTCATGAAAGATATTTCTAAACATTA
CAGTCAGAAAGCTGCAATAGAGCATGAACTTCCAACAGCAACACAGAAGCTCATTACAACGAAT
GACTGTATCCTGTCATCAGTAGTGGCATTAACAAATGGAGCAGGAAAGATCGCATCTTTCTTCA
GTAACAATGTGGACTACTTCATTGCTTCTCTGAGCTACGGGCCTAAGACAGCGAGTGGCTTCAT
TAGTCCTCTTTCAGCTGAATGCATGCTGCAGTACAAGAAAAAAGCTGCTGCCTACATGAAGGCT
CTGAGAAAGCCGCTCTTGGAGTCTGTGCCTTACGAAGAAGCACTGGCAAACCGCCGGGTCCTTC
TTAGCTCTACTGAAAGTCGAGAAGGCCTTGCACAACAGGTTCAGCAGAGTTTGGAAAAGATCTC
TAAACTGGAGCAAGAGAAAGAACATTGGATGTTGGAAGCACAGTTAGCCAAAATCAAGCTAGAG
AAAGAAAACCAGCGATTCGCAGATAAGCTGAGGAGTACGAGCAGTGGGCAGGGTCTCGGGCTGG
CCCAGGAAAATCCCACTGGGGCGAATGCGACGGGCCAGGAAGAAACCTCGGCTAGGGCTGCACT
GGAGCCTGCTCATAGCACCAGTCTGATTGGGATTTTAACCAGGACATCTGACAATGAGGTTCCA
GATGTGGAATCTCGTGAAGACTTAATTAAAAATCACTACATGGCAAGGATCATGGAATTGACAT
CTCAACTGCAGCTGGCTGACAGTAAGTCAGTGCACTTTTATGCAGAGTGCCGAGCACTCTCTAA
GAGACTGGCCTTGGCTGAAAAGTCTAAAGAGGCACTGACAGAAGAGATGAAAGTAGCCGGTCAG
AACATCAGTAGACTTCAGGATGAGCTGACAACGACCAAGAGGAGTTATGAGGATCAATTAAGTA
TGATGAGTGACCACCTGTGCAGCATGAATGAGACATTATCTAAACAGAGAGAAGAGATTGACAC
ACTGAAGATGTCCAGTAAGGGAAATTCTAAAAAGAACAAGAGTCGATAGTTTACACATAGATGG
TTGGCGACTTCTTTCCAAAGCTGCTACTGTTGCACGGAGCTACAGGACCCAGACCCCTTGTCCA
GTGTCCAGTGCTGGCCGCCTTCAGGAAGCTGGGGTGTTGTTGGACCTAGTAAACTAGTCAGTGT
TGTAAATGGCCTTGAAACATTTAAAATATATTTGTAATCAGTAAGGCAAATACAGAATTTAATG
TTGACAGTAAAATGGAGAACAATACATGTACCATGGATATTGTAGGTTTCCTTAATGCTGTTTT
TACTGTGCACTTTTTAAAATTAGGTTTTAATTTCAGTATGTAAGAACAACAAATATTTTGTATA
TTTTCAAACTCAATTATATGGTAATCGATTTGGTATCTATGGAATAGATCTATGTTTCTGGATA
AAATGCTTAAATTGTCCAACTGTCATGACTTCTTGCTATAATTGAAAGCAGTCTCCAGATTCTT
TTTGAAGACTTATTCATAGTCTGTCTCTCTCTCTCTCTCCAGAGGGGGTGGGTCTTGCAAACTT
AACTTCAGATCTTGTGGGTTTATCATTGTCTTCAGCTCTTCAGTACCTTCTCTGTGTTGGAATA
ATAGCTTAAGGAAATTGATGTCAATAAATTCGTACTTACATCAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038345167	(Get FASTA)	NCBI Sequence Viewer
	XP_038407170	(Get FASTA)	NCBI Sequence Viewer
	XP_038471066	(Get FASTA)	NCBI Sequence Viewer
	XP_038536449	(Get FASTA)	NCBI Sequence Viewer
	XP_531815	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000031860.2
	ENSCAFP00000031863.3
	ENSCAFP00000045778.2
	ENSCAFP00000067903.1
	ENSCAFP00000068352.1
	ENSCAFP00030013691.1
	ENSCAFP00040020975.1
	ENSCAFP00845007936
	ENSCAFP00845007936.1
	ENSCAFP00845007947.1
	ENSCAFP00845008006.1
	ENSCAFP00845008044.1
	ENSCAFP00845008083.1

RefSeq Acc Id:

XP_531815 ⟸ XM_531815

- UniProtKB:

A0A8C0LRF2 (UniProtKB/TrEMBL), A0A8I3MZ61 (UniProtKB/TrEMBL), A0A8P0NLS1 (UniProtKB/TrEMBL), A0A8C0SH09 (UniProtKB/TrEMBL), A0A8I3MWR0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MASAELQGKYQKLAQEYSKLRAQNQVLKKGVVDEQANSAALKEQLKMKDQSLRKLQQEMDSLTF
RNLQLAKRVELLQDELALSEPRGKKNKKSGESSSQLSQEQKSVFDEDLQKKIEENERLHIQFFE
ADEQHKHVEAELRSRLATLEMEAAQHQAVVDGLTRKYMETIEKLQNDKAKLEVKSQTLEKEAKE
CRLRTEECQLQLKNLHEDLSGRLEESLSIITEKVPFNDTKYSQYNALNVPLHNRRHQLKMRDIA
GQALAFVQDLVTALLNFHTYTEQRIQIFPIDSAIDTISPLNQKFSQYLHENASYVRPLEEGMLH
LFESITEDTVTVLETTVKLKTFSEHLTSYICFLRKILPYQLKSLEEECESSLCTSALRARNLEL
SQDMKKMTAVFEKLQTYIGLLALPSTEPDGLLRTNYSSVLTNVGAALHGFHDVMKDISKHYSQK
AAIEHELPTATQKLITTNDCILSSVVALTNGAGKIASFFSNNVDYFIASLSYGPKTASGFISPL
SAECMLQYKKKAAAYMKALRKPLLESVPYEEALANRRVLLSSTESREGLAQQVQQSLEKISKLE
QEKEHWMLEAQLAKIKLEKENQRFADKLRSTSSGQGLGLAQENPTGANATGQEETSARAALEPA
HSTSLIGILTRTSDNEVPDVESREDLIKNHYMARIMELTSQLQLADSKSVHFYAECRALSKRLA
LAEKSKEALTEEMKVAGQNISRLQDELTTTKRSYEDQLSMMSDHLCSMNETLSKQREEIDTLKM
SSKGNSKKNKSR

hide sequence

RefSeq Acc Id:

ENSCAFP00000031863 ⟸ ENSCAFT00000036481

RefSeq Acc Id:

ENSCAFP00000031860 ⟸ ENSCAFT00000036478

RefSeq Acc Id:

ENSCAFP00000045778 ⟸ ENSCAFT00000071993

RefSeq Acc Id:

XP_038345167 ⟸ XM_038489239

RefSeq Acc Id:

XP_038471066 ⟸ XM_038615138

RefSeq Acc Id:	XP_038536449 ⟸ XM_038680521
- UniProtKB:	A0A8C0LRF2 (UniProtKB/TrEMBL), A0A8I3MZ61 (UniProtKB/TrEMBL), A0A8P0NLS1 (UniProtKB/TrEMBL), A0A8C0SH09 (UniProtKB/TrEMBL), A0A8I3MWR0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038407170 ⟸ XM_038551242
- UniProtKB:	A0A8C0LRF2 (UniProtKB/TrEMBL), A0A8C0SH09 (UniProtKB/TrEMBL), A0A8I3MWR0 (UniProtKB/TrEMBL), A0A8I3MZ61 (UniProtKB/TrEMBL), A0A8P0NLS1 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845007947 ⟸ ENSCAFT00845010197

RefSeq Acc Id:

ENSCAFP00845008006 ⟸ ENSCAFT00845010279

RefSeq Acc Id:

ENSCAFP00845008044 ⟸ ENSCAFT00845010346

RefSeq Acc Id:

ENSCAFP00845008083 ⟸ ENSCAFT00845010402

RefSeq Acc Id:

ENSCAFP00845007936 ⟸ ENSCAFT00845010181

Protein Domains

Protein phosphatase 1 regulatory subunit 21 N-

Promoters

RGD ID:

13685062

Promoter ID:

EPDNEW_C3129

Type:

initiation region

Name:

PPP1R21_1

Description:

protein phosphatase 1 regulatory subunit 21

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	10	50,350,566 - 50,350,626	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000002688	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030008417	UniProtKB/TrEMBL
	ENSCAFG00040012806	UniProtKB/TrEMBL
	ENSCAFG00845005733	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000036478.3	UniProtKB/TrEMBL
	ENSCAFT00000036481.5	UniProtKB/TrEMBL
	ENSCAFT00000071993.2	UniProtKB/TrEMBL
	ENSCAFT00000100403.1	UniProtKB/TrEMBL
	ENSCAFT00000103779.1	UniProtKB/TrEMBL
	ENSCAFT00030015703.1	UniProtKB/TrEMBL
	ENSCAFT00040024145.1	UniProtKB/TrEMBL
	ENSCAFT00845010181	ENTREZGENE
	ENSCAFT00845010181.1	UniProtKB/TrEMBL
	ENSCAFT00845010197.1	UniProtKB/TrEMBL
	ENSCAFT00845010279.1	UniProtKB/TrEMBL
	ENSCAFT00845010346.1	UniProtKB/TrEMBL
	ENSCAFT00845010402.1	UniProtKB/TrEMBL
InterPro	KLRAQ/TTKRSYEDQ_C	UniProtKB/TrEMBL
	PPP1R21	UniProtKB/TrEMBL
	PPP1R21_C	UniProtKB/TrEMBL
	Unchr_KLRAQ/TTKRSYEDQ_N	UniProtKB/TrEMBL
KEGG Report	cfa:474586	UniProtKB/TrEMBL
NCBI Gene	PPP1R21	ENTREZGENE
PANTHER	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 21	UniProtKB/TrEMBL
	PTHR21448	UniProtKB/TrEMBL
Pfam	KLRAQ	UniProtKB/TrEMBL
	PPP1R21_C	UniProtKB/TrEMBL
	TTKRSYEDQ	UniProtKB/TrEMBL
SMART	KLRAQ	UniProtKB/TrEMBL
UniProt	A0A8C0LRF2	ENTREZGENE
	A0A8C0SH09	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MUQ7_CANLF	UniProtKB/TrEMBL
	A0A8I3MWR0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MZ61	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MZD6_CANLF	UniProtKB/TrEMBL
	A0A8I3NCP3_CANLF	UniProtKB/TrEMBL
	A0A8P0NLS1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0NW15_CANLF	UniProtKB/TrEMBL
	A0A8P0PHK3_CANLF	UniProtKB/TrEMBL
	A0A8P0TK57_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:44889	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

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