LOC476372 (ATP synthase subunit f, mitochondrial-like) - Rat Genome Database

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Gene: LOC476372 (ATP synthase subunit f, mitochondrial-like) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: LOC476372
Name: ATP synthase subunit f, mitochondrial-like
RGD ID: 12145237
Description: ENCODES a protein that exhibits proton-transporting ATP synthase activity, rotational mechanism (inferred); INVOLVED IN monoatomic ion transport (inferred); proton motive force-driven mitochondrial ATP synthesis (inferred); FOUND IN membrane (inferred); mitochondrial inner membrane (inferred); mitochondrial proton-transporting ATP synthase complex (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ATP synthase subunit f, mitochondrial pseudogene
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11101,172,172 - 101,172,541 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1101,374,051 - 101,374,400 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01101,822,760 - 101,823,109 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11101,493,635 - 101,494,015 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01101,179,677 - 101,180,049 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01101,935,488 - 101,935,868 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Variants

.
Variants in LOC476372
4 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_038466983   ⟹   XP_038322911
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11101,493,635 - 101,494,015 (-)NCBI
RefSeq Acc Id: XM_038466984   ⟹   XP_038322912
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11101,493,635 - 101,494,015 (-)NCBI
RefSeq Acc Id: XM_038527682   ⟹   XP_038383610
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01101,935,488 - 101,935,868 (-)NCBI
RefSeq Acc Id: XM_038527683   ⟹   XP_038383611
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01101,935,488 - 101,935,868 (-)NCBI
RefSeq Acc Id: XM_038591979   ⟹   XP_038447907
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01101,179,700 - 101,180,049 (-)NCBI
RefSeq Acc Id: XM_038591980   ⟹   XP_038447908
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01101,179,677 - 101,180,049 (-)NCBI
RefSeq Acc Id: XM_038633989   ⟹   XP_038489917
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1101,374,051 - 101,374,400 (-)NCBI
RefSeq Acc Id: XM_038634034   ⟹   XP_038489962
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1101,374,134 - 101,374,400 (-)NCBI
RefSeq Acc Id: XM_038655785   ⟹   XP_038511713
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01101,822,760 - 101,823,109 (-)NCBI
RefSeq Acc Id: XM_038655786   ⟹   XP_038511714
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01101,822,843 - 101,823,109 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_038322912   ⟸   XM_038466984
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038322911   ⟸   XM_038466983
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038447908   ⟸   XM_038591980
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038447907   ⟸   XM_038591979
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038511713   ⟸   XM_038655785
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KN78 (UniProtKB/TrEMBL),   A0A8C0RZ36 (UniProtKB/TrEMBL),   A0A8C0NKJ5 (UniProtKB/TrEMBL),   A0A8I3MVC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038511714   ⟸   XM_038655786
- Peptide Label: isoform X2
- UniProtKB: A0A8C0QN38 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038489917   ⟸   XM_038633989
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KN78 (UniProtKB/TrEMBL),   A0A8C0RZ36 (UniProtKB/TrEMBL),   A0A8C0NKJ5 (UniProtKB/TrEMBL),   A0A8I3MVC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038489962   ⟸   XM_038634034
- Peptide Label: isoform X2
- UniProtKB: A0A8C0QN38 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038383611   ⟸   XM_038527683
- Peptide Label: isoform X2
- UniProtKB: A0A8C0QN38 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038383610   ⟸   XM_038527682
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KN78 (UniProtKB/TrEMBL),   A0A8C0NKJ5 (UniProtKB/TrEMBL),   A0A8C0RZ36 (UniProtKB/TrEMBL),   A0A8I3MVC6 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000049156 UniProtKB/TrEMBL
  ENSCAFG00030016413 UniProtKB/TrEMBL
  ENSCAFG00040006459 UniProtKB/TrEMBL
  ENSCAFG00040008545 UniProtKB/TrEMBL
  ENSCAFG00845003518 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000082221.2 UniProtKB/TrEMBL
  ENSCAFT00030030315.1 UniProtKB/TrEMBL
  ENSCAFT00030030404.1 UniProtKB/TrEMBL
  ENSCAFT00040012014.1 UniProtKB/TrEMBL
  ENSCAFT00040015962.1 UniProtKB/TrEMBL
  ENSCAFT00040016080.1 UniProtKB/TrEMBL
  ENSCAFT00845006278.1 UniProtKB/TrEMBL
InterPro F1F0-ATPsyn_F_prd UniProtKB/TrEMBL
NCBI Gene LOC476372 ENTREZGENE
PANTHER ATP SYNTHASE SUBUNIT F, MITOCHONDRIAL UniProtKB/TrEMBL
  PTHR13080 UniProtKB/TrEMBL
Pfam WRW UniProtKB/TrEMBL
UniProt A0A8C0KN78 ENTREZGENE
  A0A8C0NKJ5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0QN38 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RZ36 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MVC6 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-12 LOC476372  ATP synthase subunit f, mitochondrial-like  LOC476372  ATP synthase subunit f, mitochondrial pseudogene  Symbol and/or name change 5135510 APPROVED