TNNT3 (troponin T3, fast skeletal type)

Gene: TNNT3 (troponin T3, fast skeletal type) Canis lupus familiaris

Analyze

Symbol:

TNNT3

Name:

troponin T3, fast skeletal type

RGD ID:

12145140

Description:

ENCODES a protein that exhibits actin binding (ortholog); calcium-dependent protein binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN regulation of striated muscle contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); delta beta-thalassemia (ortholog); developmental and epileptic encephalopathy (ortholog); FOUND IN troponin complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

troponin T, fast skeletal muscle

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	46,131,925 - 46,148,577 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	46,074,700 - 46,149,131 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	44,741,795 - 44,758,468 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	46,812,971 - 46,829,661 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	46,756,047 - 46,829,658 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	46,260,272 - 46,276,949 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	45,840,558 - 45,857,236 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	46,586,814 - 46,603,499 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

arthrogryposis multiplex congenita (ISO)

delta beta-thalassemia (ISO)

developmental and epileptic encephalopathy (ISO)

distal arthrogryposis (ISO)

distal arthrogryposis type 2B (ISO)

distal arthrogryposis type 2B1 (ISO)

distal arthrogryposis type 2B2 (ISO)

early infantile epileptic encephalopathy (ISO)

genetic disease (ISO)

immunodeficiency 39 (ISO)

microcephaly (ISO)

neuronal ceroid lipofuscinosis (ISO)

osteochondrodysplasia (ISO)

Segawa Syndrome, Autosomal Recessive (ISO)

Weissenbacher-Zweymuller syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

regulation of muscle contraction (IEA)

regulation of striated muscle contraction (ISO)

sarcomere organization (IEA)

skeletal muscle contraction (IEA)

Cellular Component

troponin complex (IEA,ISO)

Molecular Function

actin binding (ISO)

calcium-dependent protein binding (ISO)

tropomyosin binding (IEA,ISO)

troponin C binding (IEA)

troponin I binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

acebutolol pharmacodynamics pathway (ISO)

adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway (ISO)

amiodarone pharmacodynamics pathway (ISO)

amlodipine pharmacodynamics pathway (ISO)

atenolol pharmacodynamics pathway (ISO)

betaxolol pharmacodynamics pathway (ISO)

bisoprolol pharmacodynamics pathway (ISO)

bupranolol drug pathway (ISO)

bupranolol pharmacodynamics pathway (ISO)

carvedilol pharmacodynamics pathway (ISO)

diltiazem pharmacodynamics pathway (ISO)

disopyramide pharmacodynamics pathway (ISO)

dobutamine pharmacodynamics pathway (ISO)

esmolol pharmacodynamics pathway (ISO)

flecainde pharmacodynamics pathway (ISO)

fosphenytoin pharmacodynamics pathway (ISO)

ibutilide pharmacodynamics pathway (ISO)

isoprenaline pharmacodynamics pathway (ISO)

isradipine pharmacodynamics pathway (ISO)

levobunolol pharmacodynamics pathway (ISO)

lidocaine pharmacodynamics pathway (ISO)

metoprolol pharmacodynamics pathway (ISO)

mexiletine pharmacodynamics pathway (ISO)

nadolol pharmacodynamics pathway (ISO)

nebivolol pharmacodynamics pathway (ISO)

nifedipine pharmacodynamics pathway (ISO)

nimodipine pharmacodynamics pathway (ISO)

nisoldipine pharmacodynamics pathway (ISO)

nitrendipine pharmacodynamics pathway (ISO)

penbutolol pharmacodynamics pathway (ISO)

phenytoin pharmacodynamics pathway (ISO)

pindolol pharmacodynamics pathway (ISO)

procainamide pharmacodynamics pathway (ISO)

propranolol pharmacodynamics pathway (ISO)

quinidine pharmacodynamics pathway (ISO)

sotalol pharmacodynamics pathway (ISO)

timolol pharmacodynamics pathway (ISO)

verapamil pharmacodynamics pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

TNNT3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	46,131,925 - 46,148,577 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	46,074,700 - 46,149,131 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	44,741,795 - 44,758,468 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	46,812,971 - 46,829,661 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	46,756,047 - 46,829,658 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	46,260,272 - 46,276,949 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	45,840,558 - 45,857,236 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	46,586,814 - 46,603,499 (+)	NCBI		UU_Cfam_GSD_1.0

TNNT3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	1,919,552 - 1,938,702 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	1,919,703 - 1,938,706 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	1,940,933 - 1,959,932 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	1,897,445 - 1,916,514 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	11	1,900,668 - 1,916,510	NCBI
Celera	11	11,177 - 30,313 (+)	NCBI		Celera
Cytogenetic Map	11	p15.5	NCBI
HuRef	11	1,709,242 - 1,728,503 (+)	NCBI		HuRef
CHM1_1	11	1,939,717 - 1,958,858 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	1,983,592 - 2,002,746 (+)	NCBI		T2T-CHM13v2.0

Tnnt3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	142,052,530 - 142,069,746 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	142,052,573 - 142,069,746 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	142,498,771 - 142,516,213 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	142,498,836 - 142,516,009 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	149,684,741 - 149,701,914 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	142,308,233 - 142,325,393 (+)	NCBI		MGSCv36	mm8
Celera	7	142,254,685 - 142,271,858 (+)	NCBI		Celera
Cytogenetic Map	7	F5	NCBI
cM Map	7	87.94	NCBI

Tnnt3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	207,082,014 - 207,099,014 (+)	NCBI		GRCr8
mRatBN7.2	1	197,652,535 - 197,669,736 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	197,652,431 - 197,669,535 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	206,025,246 - 206,042,256 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	213,111,112 - 213,128,127 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	205,785,265 - 205,802,280 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	215,666,628 - 215,683,628 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	215,666,628 - 215,683,628 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	222,561,418 - 222,578,418 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	202,748,063 - 202,761,965 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	202,908,518 - 202,917,537 (+)	NCBI
Celera	1	195,269,899 - 195,286,899 (+)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI

Tnnt3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955422	13,702,015 - 13,718,915 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955422	13,702,015 - 13,718,915 (+)	NCBI	ChiLan1.0	ChiLan1.0

TNNT3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	4,328,279 - 4,340,866 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	3,539,861 - 3,552,260 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	1,936,614 - 1,955,784 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	1,968,184 - 1,987,846 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	1,968,184 - 1,987,849 (+)	Ensembl	panpan1.1		panPan2

Tnnt3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	1,551,243 - 1,567,924 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936816	805,317 - 822,043 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936816	805,360 - 822,044 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TNNT3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	1,299,174 - 1,316,517 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	1,297,826 - 1,316,865 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

TNNT3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	1,718,729 - 1,738,271 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	1,718,523 - 1,738,477 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	98,918,119 - 98,934,360 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tnnt3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624767	14,787,248 - 14,802,098 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624767	14,784,267 - 14,801,477 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TNNT3
253 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High								6
Medium
Low	3	1	2		1		2		2			5
Below cutoff		3	15	1	5	1	4		8	5	10	1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005631340	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005631341	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005631342	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005631343	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005631344	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014121331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014121332	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022405522	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424688	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424689	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424690	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424691	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500906	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500907	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500909	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038563575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038563576	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038563577	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038563578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000016026 ⟹ ENSCAFP00000014822

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	46,132,025 - 46,148,461 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000038867 ⟹ ENSCAFP00000034637

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	46,132,025 - 46,148,461 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000065617 ⟹ ENSCAFP00000056461

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	46,074,700 - 46,149,131 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000066157 ⟹ ENSCAFP00000065901

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	46,074,700 - 46,149,131 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000068637 ⟹ ENSCAFP00000053047

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	46,074,700 - 46,149,131 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000068724 ⟹ ENSCAFP00000045665

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	46,074,700 - 46,148,574 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000087393 ⟹ ENSCAFP00000053396

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	46,074,700 - 46,149,131 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000093630 ⟹ ENSCAFP00000051017

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	46,074,700 - 46,148,574 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845018167 ⟹ ENSCAFP00845014160

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	46,756,047 - 46,829,658 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845018200 ⟹ ENSCAFP00845014190

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	46,756,047 - 46,829,658 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845018281 ⟹ ENSCAFP00845014265

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	46,816,020 - 46,829,546 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845018366 ⟹ ENSCAFP00845014338

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	46,816,020 - 46,829,546 (+)	Ensembl

RefSeq Acc Id:

XM_005631340 ⟹ XP_005631397

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	46,131,929 - 46,148,577 (+)	NCBI
Dog10K_Boxer_Tasha	18	44,741,801 - 44,758,468 (+)	NCBI

Sequence:

show sequence

TCCCGCCTGCTCCACGAGCCCAGCCACCCAGCCCCTGGCCAATGGGCTGCTGGGCAAGATCAAA
TGTCACTATAACATGAGGGCGTGAGCCGAGCGGGCAGTGCCTGAGCCGGTCCTGTCCACAGGGA
GCTCTTCTCTCCAGACTCAGCCACAGAAACAGTCCCGCCACCATGTCTGACGAGGAAGTTGAAC
AAGTCGAGGAGCAGTACGAGGAAGAAGAGGAGGCCCAGGAGGAAGCTACAGAAGTCCACAAAGA
AGTTCATGAACCAGAAGAGGTCCAGGAAGAGGAGAAGCCAAGACCCAGACTCACTGCTCCTAAG
ATCCCAGAAGGGGAGAAAGTGGACTTCGATGACATCCAGAAGAAGCGCCAGAACAAGGATCTCA
TGGAGCTGCAGGCTCTCATTGACAGCCACTTTGAAGCACGCAAGAAGGAGGAAGAGGAGCTGAT
TGCTCTTAAGGAGAGGATTGAGAAGCGCCGCGCAGAGAGAGCCGAGCAGCAGAGAATCCGCGCC
GAAAAGGAGAGAGAGCGCCAGAACAGACTGGCGGAAGAAAAAGCCCGGAGGGAGGAGGAGGATG
CCAAGAGGAGAGCCGAGGATGACCTGAAGAAGAAGAAAGCCCTGTCCTCCATGGGCGCCAACTA
CAGCAGCTACCTGGCCAAGGCTGACCAGAAGAGAGGCAAGAAGCAGACTGCCCGGGAGATGAAG
AAGAAGGTTCTGGCAGAGAGACGCAAGCCACTCAACATTGACCACCTCAGTGAGGACAAGCTGA
GGGACAAGGCCAAGGAGCTCTGGGACACCCTCTACCAACTGGAAACAGACAAGTTTGAGTTTGG
GGAGAAGCTGAAGCGCCAGAAATATGATATCACCAATCTCAGAAGCCGCATCGATCAGGCCCAG
AAGCATAGCAAGAAGGCCGGGGCCCCGGCCAAGGGCAAAGTTGGTGGGCGTTGGAAGTGAAGCA
GCCGCAGAAGCTCCCAGAGGCAGAGACCCTCGGCCTGAGCTGCCCCCATGGCAGCGTCTGGCCC
CCCGGCCTGAGGGCGGAGAGCCTGCCCCCAGGCACCCCACATGTCTCTGTCCTGGCTGCCCCCA
TCTCCGGGGGTCTGTGAATAAAGCTGGCAGATTCCCCTCCACA

hide sequence

RefSeq Acc Id:

XM_005631341 ⟹ XP_005631398

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	46,131,925 - 46,148,577 (+)	NCBI
Dog10K_Boxer_Tasha	18	44,741,798 - 44,758,468 (+)	NCBI

Sequence:

show sequence

CCCTTCCCGCCTGCTCCACGAGCCCAGCCACCCAGCCCCTGGCCAATGGGCTGCTGGGCAAGAT
CAAATGTCACTATAACATGAGGGCGTGAGCCGAGCGGGCAGTGCCTGAGCCGGTCCTGTCCACA
GGGAGCTCTTCTCTCCAGACTCAGCCACAGAAACAGTCCCGCCACCATGTCTGACGAGGAAGTT
GAACAAGTCGAGGAGCAGTACGAGGAAGAAGAGGAGGCCCAGGAGGAAGCTACAGAAGTCCACA
AAGAAGTTCATGAACCAGAAGAGGTCCAGGAAGAGGAGAAGCCAAGACCCAGACTCACTGCTCC
TAAGATCCCAGAAGGGGAGAAAGTGGACTTCGATGACATCCAGAAGAAGCGCCAGAACAAGGAT
CTCATGGAGCTGCAGGCTCTCATTGACAGCCACTTTGAAGCACGCAAGAAGGAGGAAGAGGAGC
TGATTGCTCTTAAGGAGAGGATTGAGAAGCGCCGCGCAGAGAGAGCCGAGCAGCAGAGAATCCG
CGCCGAAAAGGAGAGAGAGCGCCAGAACAGACTGGCGGAAGAAAAAGCCCGGAGGGAGGAGGAG
GATGCCAAGAGGAGAGCCGAGGATGACCTGAAGAAGAAGAAAGCCCTGTCCTCCATGGGCGCCA
ACTACAGCAGCTACCTGGCCAAGGCTGACCAGAAGAGAGGCAAGAAGCAGACTGCCCGGGAGAT
GAAGAAGAAGGTTCTGGCAGAGAGACGCAAGCCACTCAACATTGACCACCTCAGTGAGGACAAG
CTGAGGGACAAGGCCAAGGAGCTCTGGGACACCCTCTACCAACTGGAAACAGACAAGTTTGAGT
TTGGGGAGAAGCTGAAGCGCCAGAAATATGATATCATGAACATGCGGGCCAGAGTGGAGATGCT
GGCCAAGTTTAGCAAGAAGGCCGGGGCCCCGGCCAAGGGCAAAGTTGGTGGGCGTTGGAAGTGA
AGCAGCCGCAGAAGCTCCCAGAGGCAGAGACCCTCGGCCTGAGCTGCCCCCATGGCAGCGTCTG
GCCCCCCGGCCTGAGGGCGGAGAGCCTGCCCCCAGGCACCCCACATGTCTCTGTCCTGGCTGCC
CCCATCTCCGGGGGTCTGTGAATAAAGCTGGCAGATTCCCCTCCACA

hide sequence

RefSeq Acc Id:

XM_005631343 ⟹ XP_005631400

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	46,131,929 - 46,148,577 (+)	NCBI
Dog10K_Boxer_Tasha	18	44,741,799 - 44,758,468 (+)	NCBI

Sequence:

show sequence

TCCCGCCTGCTCCACGAGCCCAGCCACCCAGCCCCTGGCCAATGGGCTGCTGGGCAAGATCAAA
TGTCACTATAACATGAGGGCGTGAGCCGAGCGGGCAGTGCCTGAGCCGGTCCTGTCCACAGGGA
GCTCTTCTCTCCAGACTCAGCCACAGAAACAGTCCCGCCACCATGTCTGACGAGGAAGTTGAAC
AAGTCGAGGAGCAGTACGAGGAAGAAGAGGAGGCCCAGGAGGAAGAAGAGGTCCAGGAAGAGGA
GAAGCCAAGACCCAGACTCACTGCTCCTAAGATCCCAGAAGGGGAGAAAGTGGACTTCGATGAC
ATCCAGAAGAAGCGCCAGAACAAGGATCTCATGGAGCTGCAGGCTCTCATTGACAGCCACTTTG
AAGCACGCAAGAAGGAGGAAGAGGAGCTGATTGCTCTTAAGGAGAGGATTGAGAAGCGCCGCGC
AGAGAGAGCCGAGCAGCAGAGAATCCGCGCCGAAAAGGAGAGAGAGCGCCAGAACAGACTGGCG
GAAGAAAAAGCCCGGAGGGAGGAGGAGGATGCCAAGAGGAGAGCCGAGGATGACCTGAAGAAGA
AGAAAGCCCTGTCCTCCATGGGCGCCAACTACAGCAGCTACCTGGCCAAGGCTGACCAGAAGAG
AGGCAAGAAGCAGACTGCCCGGGAGATGAAGAAGAAGGTTCTGGCAGAGAGACGCAAGCCACTC
AACATTGACCACCTCAGTGAGGACAAGCTGAGGGACAAGGCCAAGGAGCTCTGGGACACCCTCT
ACCAACTGGAAACAGACAAGTTTGAGTTTGGGGAGAAGCTGAAGCGCCAGAAATATGATATCAC
CAATCTCAGAAGCCGCATCGATCAGGCCCAGAAGCATAGCAAGAAGGCCGGGGCCCCGGCCAAG
GGCAAAGTTGGTGGGCGTTGGAAGTGAAGCAGCCGCAGAAGCTCCCAGAGGCAGAGACCCTCGG
CCTGAGCTGCCCCCATGGCAGCGTCTGGCCCCCCGGCCTGAGGGCGGAGAGCCTGCCCCCAGGC
ACCCCACATGTCTCTGTCCTGGCTGCCCCCATCTCCGGGGGTCTGTGAATAAAGCTGGCAGATT
CCCCTCCACA

hide sequence

RefSeq Acc Id:

XM_005631344 ⟹ XP_005631401

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	46,131,926 - 46,148,577 (+)	NCBI
Dog10K_Boxer_Tasha	18	44,741,795 - 44,758,468 (+)	NCBI

Sequence:

show sequence

CCTTCCCGCCTGCTCCACGAGCCCAGCCACCCAGCCCCTGGCCAATGGGCTGCTGGGCAAGATC
AAATGTCACTATAACATGAGGGCGTGAGCCGAGCGGGCAGTGCCTGAGCCGGTCCTGTCCACAG
GGAGCTCTTCTCTCCAGACTCAGCCACAGAAACAGTCCCGCCACCATGTCTGACGAGGAAGTTG
AACAAGTCGAGGAGCAGTACGAGGAAGAAGAGGAGGCCCAGGAGGAAGAAGAGGTCCAGGAAGA
GGAGAAGCCAAGACCCAGACTCACTGCTCCTAAGATCCCAGAAGGGGAGAAAGTGGACTTCGAT
GACATCCAGAAGAAGCGCCAGAACAAGGATCTCATGGAGCTGCAGGCTCTCATTGACAGCCACT
TTGAAGCACGCAAGAAGGAGGAAGAGGAGCTGATTGCTCTTAAGGAGAGGATTGAGAAGCGCCG
CGCAGAGAGAGCCGAGCAGCAGAGAATCCGCGCCGAAAAGGAGAGAGAGCGCCAGAACAGACTG
GCGGAAGAAAAAGCCCGGAGGGAGGAGGAGGATGCCAAGAGGAGAGCCGAGGATGACCTGAAGA
AGAAGAAAGCCCTGTCCTCCATGGGCGCCAACTACAGCAGCTACCTGGCCAAGGCTGACCAGAA
GAGAGGCAAGAAGCAGACTGCCCGGGAGATGAAGAAGAAGGTTCTGGCAGAGAGACGCAAGCCA
CTCAACATTGACCACCTCAGTGAGGACAAGCTGAGGGACAAGGCCAAGGAGCTCTGGGACACCC
TCTACCAACTGGAAACAGACAAGTTTGAGTTTGGGGAGAAGCTGAAGCGCCAGAAATATGATAT
CATGAACATGCGGGCCAGAGTGGAGATGCTGGCCAAGTTTAGCAAGAAGGCCGGGGCCCCGGCC
AAGGGCAAAGTTGGTGGGCGTTGGAAGTGAAGCAGCCGCAGAAGCTCCCAGAGGCAGAGACCCT
CGGCCTGAGCTGCCCCCATGGCAGCGTCTGGCCCCCCGGCCTGAGGGCGGAGAGCCTGCCCCCA
GGCACCCCACATGTCTCTGTCCTGGCTGCCCCCATCTCCGGGGGTCTGTGAATAAAGCTGGCAG
ATTCCCCTCCACA

hide sequence

RefSeq Acc Id:

XM_038424688 ⟹ XP_038280616

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	46,812,977 - 46,829,661 (+)	NCBI

RefSeq Acc Id:

XM_038424689 ⟹ XP_038280617

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	46,812,974 - 46,829,661 (+)	NCBI

RefSeq Acc Id:

XM_038424690 ⟹ XP_038280618

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	46,812,975 - 46,829,661 (+)	NCBI

RefSeq Acc Id:

XM_038424691 ⟹ XP_038280619

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	46,812,971 - 46,829,661 (+)	NCBI

RefSeq Acc Id:

XM_038500906 ⟹ XP_038356834

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	46,260,278 - 46,276,949 (+)	NCBI

RefSeq Acc Id:

XM_038500907 ⟹ XP_038356835

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	46,260,275 - 46,276,949 (+)	NCBI

RefSeq Acc Id:

XM_038500908 ⟹ XP_038356836

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	46,260,276 - 46,276,949 (+)	NCBI

RefSeq Acc Id:

XM_038500909 ⟹ XP_038356837

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	46,260,272 - 46,276,949 (+)	NCBI

RefSeq Acc Id:

XM_038563575 ⟹ XP_038419503

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	46,586,820 - 46,603,499 (+)	NCBI

RefSeq Acc Id:

XM_038563576 ⟹ XP_038419504

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	46,586,817 - 46,603,499 (+)	NCBI

RefSeq Acc Id:

XM_038563577 ⟹ XP_038419505

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	46,586,818 - 46,603,499 (+)	NCBI

RefSeq Acc Id:

XM_038563578 ⟹ XP_038419506

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	46,586,814 - 46,603,499 (+)	NCBI

RefSeq Acc Id:

XM_038627696 ⟹ XP_038483624

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	45,840,564 - 45,857,236 (+)	NCBI

RefSeq Acc Id:

XM_038627697 ⟹ XP_038483625

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	45,840,561 - 45,857,236 (+)	NCBI

RefSeq Acc Id:

XM_038627698 ⟹ XP_038483626

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	45,840,562 - 45,857,236 (+)	NCBI

RefSeq Acc Id:

XM_038627699 ⟹ XP_038483627

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	45,840,558 - 45,857,236 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005631397	(Get FASTA)	NCBI Sequence Viewer
	XP_005631398	(Get FASTA)	NCBI Sequence Viewer
	XP_005631400	(Get FASTA)	NCBI Sequence Viewer
	XP_005631401	(Get FASTA)	NCBI Sequence Viewer
	XP_038280616	(Get FASTA)	NCBI Sequence Viewer
	XP_038280617	(Get FASTA)	NCBI Sequence Viewer
	XP_038280618	(Get FASTA)	NCBI Sequence Viewer
	XP_038280619	(Get FASTA)	NCBI Sequence Viewer
	XP_038356834	(Get FASTA)	NCBI Sequence Viewer
	XP_038356835	(Get FASTA)	NCBI Sequence Viewer
	XP_038356836	(Get FASTA)	NCBI Sequence Viewer
	XP_038356837	(Get FASTA)	NCBI Sequence Viewer
	XP_038419503	(Get FASTA)	NCBI Sequence Viewer
	XP_038419504	(Get FASTA)	NCBI Sequence Viewer
	XP_038419505	(Get FASTA)	NCBI Sequence Viewer
	XP_038419506	(Get FASTA)	NCBI Sequence Viewer
	XP_038483624	(Get FASTA)	NCBI Sequence Viewer
	XP_038483625	(Get FASTA)	NCBI Sequence Viewer
	XP_038483626	(Get FASTA)	NCBI Sequence Viewer
	XP_038483627	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000014822.4
	ENSCAFP00000034637.2
	ENSCAFP00000045665.1
	ENSCAFP00000051017.1
	ENSCAFP00030029587.1
	ENSCAFP00040040253.1
	ENSCAFP00040040265.1
	ENSCAFP00040040305.1
	ENSCAFP00040040316.1
	ENSCAFP00845014160
	ENSCAFP00845014160.1
	ENSCAFP00845014190.1
	ENSCAFP00845014265
	ENSCAFP00845014265.1
	ENSCAFP00845014338.1

RefSeq Acc Id:	XP_005631398 ⟸ XM_005631341
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0TTV2 (UniProtKB/TrEMBL), A0A8I3NFP3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSDEEVEQVEEQYEEEEEAQEEATEVHKEVHEPEEVQEEEKPRPRLTAPKIPEGEKVDFDDIQK KRQNKDLMELQALIDSHFEARKKEEEELIALKERIEKRRAERAEQQRIRAEKERERQNRLAEEK ARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKVLAERRKPLNID HLSEDKLRDKAKELWDTLYQLETDKFEFGEKLKRQKYDIMNMRARVEMLAKFSKKAGAPAKGKV GGRWK hide sequence

RefSeq Acc Id:	XP_005631401 ⟸ XM_005631344
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0TTU2 (UniProtKB/TrEMBL), A0A8I3N599 (UniProtKB/TrEMBL), A0A8C0NPV8 (UniProtKB/TrEMBL), A0A8C0TTV2 (UniProtKB/TrEMBL), A0A8I3NFP3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSDEEVEQVEEQYEEEEEAQEEEEVQEEEKPRPRLTAPKIPEGEKVDFDDIQKKRQNKDLMELQ ALIDSHFEARKKEEEELIALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRR AEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKVLAERRKPLNIDHLSEDKLRDKA KELWDTLYQLETDKFEFGEKLKRQKYDIMNMRARVEMLAKFSKKAGAPAKGKVGGRWK hide sequence

RefSeq Acc Id:	XP_005631397 ⟸ XM_005631340
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0Z6D9 (UniProtKB/TrEMBL), A0A8I3N9X8 (UniProtKB/TrEMBL), A0A8C0TTV2 (UniProtKB/TrEMBL), A0A8I3NFP3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSDEEVEQVEEQYEEEEEAQEEATEVHKEVHEPEEVQEEEKPRPRLTAPKIPEGEKVDFDDIQK KRQNKDLMELQALIDSHFEARKKEEEELIALKERIEKRRAERAEQQRIRAEKERERQNRLAEEK ARREEEDAKRRAEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKVLAERRKPLNID HLSEDKLRDKAKELWDTLYQLETDKFEFGEKLKRQKYDITNLRSRIDQAQKHSKKAGAPAKGKV GGRWK hide sequence

RefSeq Acc Id:	XP_005631400 ⟸ XM_005631343
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0NPV8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSDEEVEQVEEQYEEEEEAQEEEEVQEEEKPRPRLTAPKIPEGEKVDFDDIQKKRQNKDLMELQ ALIDSHFEARKKEEEELIALKERIEKRRAERAEQQRIRAEKERERQNRLAEEKARREEEDAKRR AEDDLKKKKALSSMGANYSSYLAKADQKRGKKQTAREMKKKVLAERRKPLNIDHLSEDKLRDKA KELWDTLYQLETDKFEFGEKLKRQKYDITNLRSRIDQAQKHSKKAGAPAKGKVGGRWK hide sequence

RefSeq Acc Id:

ENSCAFP00000053396 ⟸ ENSCAFT00000087393

RefSeq Acc Id:

ENSCAFP00000034637 ⟸ ENSCAFT00000038867

RefSeq Acc Id:

ENSCAFP00000045665 ⟸ ENSCAFT00000068724

RefSeq Acc Id:

ENSCAFP00000053047 ⟸ ENSCAFT00000068637

RefSeq Acc Id:

ENSCAFP00000051017 ⟸ ENSCAFT00000093630

RefSeq Acc Id:

ENSCAFP00000014822 ⟸ ENSCAFT00000016026

RefSeq Acc Id:

ENSCAFP00000056461 ⟸ ENSCAFT00000065617

RefSeq Acc Id:

ENSCAFP00000065901 ⟸ ENSCAFT00000066157

RefSeq Acc Id:	XP_038356837 ⟸ XM_038500909
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038356835 ⟸ XM_038500907
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038356836 ⟸ XM_038500908
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038356834 ⟸ XM_038500906
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038483627 ⟸ XM_038627699
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038483625 ⟸ XM_038627697
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038483626 ⟸ XM_038627698
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038483624 ⟸ XM_038627696
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038280619 ⟸ XM_038424691
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0TTU2 (UniProtKB/TrEMBL), A0A8I3N599 (UniProtKB/TrEMBL), A0A8C0NPV8 (UniProtKB/TrEMBL), A0A8C0TTV2 (UniProtKB/TrEMBL), A0A8I3NFP3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038280617 ⟸ XM_038424689
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0TTV2 (UniProtKB/TrEMBL), A0A8I3NFP3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038280618 ⟸ XM_038424690
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0NPV8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038280616 ⟸ XM_038424688
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0Z6D9 (UniProtKB/TrEMBL), A0A8I3N9X8 (UniProtKB/TrEMBL), A0A8C0TTV2 (UniProtKB/TrEMBL), A0A8I3NFP3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038419506 ⟸ XM_038563578
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0NPV8 (UniProtKB/TrEMBL), A0A8C0TTU2 (UniProtKB/TrEMBL), A0A8C0TTV2 (UniProtKB/TrEMBL), A0A8I3N599 (UniProtKB/TrEMBL), A0A8I3NFP3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038419504 ⟸ XM_038563576
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0TTV2 (UniProtKB/TrEMBL), A0A8I3NFP3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038419505 ⟸ XM_038563577
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0NPV8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038419503 ⟸ XM_038563575
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0TTV2 (UniProtKB/TrEMBL), A0A8C0Z6D9 (UniProtKB/TrEMBL), A0A8I3N9X8 (UniProtKB/TrEMBL), A0A8I3NFP3 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845014265 ⟸ ENSCAFT00845018281

RefSeq Acc Id:

ENSCAFP00845014190 ⟸ ENSCAFT00845018200

RefSeq Acc Id:

ENSCAFP00845014160 ⟸ ENSCAFT00845018167

RefSeq Acc Id:

ENSCAFP00845014338 ⟸ ENSCAFT00845018366

Promoters

RGD ID:

13686538

Promoter ID:

EPDNEW_C4606

Type:

multiple initiation site

Name:

TNNT3_1

Description:

troponin T3, fast skeletal type

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_C4607

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	46,132,028 - 46,132,088	EPDNEW

RGD ID:

13686539

Promoter ID:

EPDNEW_C4607

Type:

single initiation site

Name:

TNNT3_2

Description:

troponin T3, fast skeletal type

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_C4606

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	46,135,701 - 46,135,761	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000010081	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030018415	UniProtKB/TrEMBL
	ENSCAFG00040024733	UniProtKB/TrEMBL
	ENSCAFG00845010273	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000016026.5	UniProtKB/TrEMBL
	ENSCAFT00000038867.5	UniProtKB/TrEMBL
	ENSCAFT00000068724.2	UniProtKB/TrEMBL
	ENSCAFT00000093630.2	UniProtKB/TrEMBL
	ENSCAFT00030033931.1	UniProtKB/TrEMBL
	ENSCAFT00040046123.1	UniProtKB/TrEMBL
	ENSCAFT00040046136.1	UniProtKB/TrEMBL
	ENSCAFT00040046181.1	UniProtKB/TrEMBL
	ENSCAFT00040046194.1	UniProtKB/TrEMBL
	ENSCAFT00845018167	ENTREZGENE
	ENSCAFT00845018167.1	UniProtKB/TrEMBL
	ENSCAFT00845018200.1	UniProtKB/TrEMBL
	ENSCAFT00845018281	ENTREZGENE
	ENSCAFT00845018281.1	UniProtKB/TrEMBL
	ENSCAFT00845018366.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.350	UniProtKB/TrEMBL
InterPro	TNNT	UniProtKB/TrEMBL
	Troponin	UniProtKB/TrEMBL
	Troponin_sf	UniProtKB/TrEMBL
KEGG Report	cfa:475996	UniProtKB/TrEMBL
NCBI Gene	TNNT3	ENTREZGENE
PANTHER	PTHR11521	UniProtKB/TrEMBL
	PTHR11521:SF4	UniProtKB/TrEMBL
Pfam	Troponin	UniProtKB/TrEMBL
Superfamily-SCOP	SSF90250	UniProtKB/TrEMBL
UniProt	A0A8C0NPV8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TTU2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TTV2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Z6D9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Z6J3_CANLF	UniProtKB/TrEMBL
	A0A8I3N599	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3N9X8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NDD6_CANLF	UniProtKB/TrEMBL
	A0A8I3NFP3	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:47692	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB