GPHN (gephyrin) - Rat Genome Database

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Gene: GPHN (gephyrin) Canis lupus familiaris
Analyze
Symbol: GPHN
Name: gephyrin
RGD ID: 12141895
Description: ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN establishment of protein localization (ortholog); establishment of synaptic specificity at neuromuscular junction (ortholog); gamma-aminobutyric acid receptor clustering (ortholog); PARTICIPATES IN Inhibitory synaptic transmission pathway; molybdenum cofactor biosynthetic pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); alcohol use disorder (ortholog); cerebral palsy (ortholog); FOUND IN anchored component of synaptic membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1840,585,625 - 41,204,007 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl840,585,883 - 41,203,245 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha840,270,522 - 40,895,744 (+)NCBI
ROS_Cfam_1.0840,807,578 - 41,430,716 (+)NCBI
ROS_Cfam_1.0 Ensembl840,807,424 - 41,430,706 (+)Ensembl
UMICH_Zoey_3.1840,427,159 - 41,049,600 (+)NCBI
UNSW_CanFamBas_1.0840,497,926 - 41,123,844 (+)NCBI
UU_Cfam_GSD_1.0840,856,432 - 41,482,422 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
GPHN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1840,585,625 - 41,204,007 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl840,585,883 - 41,203,245 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha840,270,522 - 40,895,744 (+)NCBI
ROS_Cfam_1.0840,807,578 - 41,430,716 (+)NCBI
ROS_Cfam_1.0 Ensembl840,807,424 - 41,430,706 (+)Ensembl
UMICH_Zoey_3.1840,427,159 - 41,049,600 (+)NCBI
UNSW_CanFamBas_1.0840,497,926 - 41,123,844 (+)NCBI
UU_Cfam_GSD_1.0840,856,432 - 41,482,422 (+)NCBI
GPHN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381466,508,147 - 67,735,355 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1466,507,407 - 67,181,803 (+)EnsemblGRCh38hg38GRCh38
GRCh371466,974,865 - 67,648,520 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361466,043,878 - 66,718,278 (+)NCBINCBI36hg18NCBI36
Build 341466,044,988 - 66,718,268NCBI
Celera1447,033,183 - 47,707,584 (+)NCBI
Cytogenetic Map14q23.3-q24.1NCBI
HuRef1447,144,073 - 47,817,837 (+)NCBIHuRef
CHM1_11466,912,247 - 67,587,111 (+)NCBICHM1_1
T2T-CHM13v2.01460,715,132 - 61,388,926 (+)NCBI
Gphn
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391278,264,099 - 78,731,546 (+)NCBIGRCm39mm39
GRCm39 Ensembl1278,273,153 - 78,731,546 (+)Ensembl
GRCm381278,217,325 - 78,684,772 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1278,226,379 - 78,684,772 (+)EnsemblGRCm38mm10GRCm38
MGSCv371279,327,642 - 79,785,759 (+)NCBIGRCm37mm9NCBIm37
MGSCv361279,145,574 - 79,603,578 (+)NCBImm8
Celera1279,690,472 - 80,148,022 (+)NCBICelera
Cytogenetic Map12C3NCBI
Gphn
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2696,954,365 - 97,483,617 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl696,892,148 - 97,483,612 (+)Ensembl
Rnor_6.06101,327,874 - 101,859,169 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6101,532,518 - 101,859,164 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06110,709,516 - 111,190,440 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.06111,210,069 - 111,237,661 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46100,833,004 - 101,302,957 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.16100,836,459 - 101,306,408 (+)NCBI
Celera695,358,601 - 95,872,910 (+)NCBICelera
Cytogenetic Map6q24NCBI
Gphn
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554663,016,479 - 3,526,231 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554663,017,474 - 3,526,375 (-)NCBIChiLan1.0ChiLan1.0
GPHN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11465,963,473 - 66,634,550 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1466,137,166 - 66,634,550 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01447,081,527 - 47,755,182 (+)NCBIMhudiblu_PPA_v0panPan3
Gphn
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864063,626,233 - 64,220,771 (-)NCBI
SpeTri2.0NW_0049364959,970,683 - 10,565,467 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GPHN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl790,346,590 - 91,041,189 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1790,345,726 - 90,913,625 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2796,902,547 - 97,222,781 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GPHN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12443,702,384 - 44,421,890 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2443,880,344 - 44,422,276 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605331,896,980 - 32,651,860 (+)NCBIVero_WHO_p1.0
Gphn
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473433,870,997 - 34,483,508 (-)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_00462473433,871,664 - 34,483,770 (-)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 20 6 6 6 6 12 8 9 3
Low 5 5 2 6 1 3
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003435031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003435032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005623530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005623533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014115977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022422121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022422122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022422123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022422124 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022422125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483497 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544974 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038589459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038589463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038589467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038589473 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609089 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673890 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673891 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673892 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673893 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000025873   ⟹   ENSCAFP00000024029
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl840,585,883 - 41,203,245 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000025875   ⟹   ENSCAFP00000024031
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl840,585,883 - 41,203,245 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000060290   ⟹   ENSCAFP00000050393
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl840,585,883 - 41,092,233 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000064690   ⟹   ENSCAFP00000065814
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl840,585,883 - 41,203,245 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000068266   ⟹   ENSCAFP00000065237
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl840,585,883 - 41,203,245 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000077872   ⟹   ENSCAFP00000043799
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl840,585,883 - 41,203,245 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845005365   ⟹   ENSCAFP00845004274
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl840,807,424 - 41,430,704 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845005421   ⟹   ENSCAFP00845004310
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl840,807,424 - 41,430,704 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845005435   ⟹   ENSCAFP00845004322
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl840,807,424 - 41,430,704 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845005477   ⟹   ENSCAFP00845004354
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl840,807,424 - 41,317,140 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845005492   ⟹   ENSCAFP00845004363
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl840,807,556 - 41,430,706 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845005539   ⟹   ENSCAFP00845004395
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl840,807,556 - 41,430,706 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845005592   ⟹   ENSCAFP00845004435
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl840,973,894 - 41,430,695 (+)Ensembl
RefSeq Acc Id: XM_003435031   ⟹   XP_003435079
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1840,586,077 - 41,203,144 (+)NCBI
Dog10K_Boxer_Tasha840,270,522 - 40,894,881 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003435032   ⟹   XP_003435080
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1840,586,077 - 41,203,144 (+)NCBI
Dog10K_Boxer_Tasha840,270,522 - 40,894,881 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005623530   ⟹   XP_005623587
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1840,585,625 - 41,204,007 (+)NCBI
Dog10K_Boxer_Tasha840,270,522 - 40,895,744 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005623533   ⟹   XP_005623590
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1840,585,630 - 41,204,007 (+)NCBI
Dog10K_Boxer_Tasha840,270,522 - 40,895,744 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014115977   ⟹   XP_013971452
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1840,585,633 - 41,203,144 (+)NCBI
Dog10K_Boxer_Tasha840,270,522 - 40,894,881 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022422121   ⟹   XP_022277829
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1840,585,628 - 41,203,144 (+)NCBI
Dog10K_Boxer_Tasha840,270,522 - 40,895,744 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022422122   ⟹   XP_022277830
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1840,585,629 - 41,204,007 (+)NCBI
Dog10K_Boxer_Tasha840,270,522 - 40,895,744 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022422123   ⟹   XP_022277831
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1840,585,626 - 41,204,007 (+)NCBI
Dog10K_Boxer_Tasha840,270,522 - 40,895,744 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022422124   ⟹   XP_022277832
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1840,585,630 - 41,204,007 (+)NCBI
Dog10K_Boxer_Tasha840,270,522 - 40,895,744 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022422125   ⟹   XP_022277833
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1840,900,681 - 41,204,007 (+)NCBI
Dog10K_Boxer_Tasha840,584,407 - 40,895,744 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038483497   ⟹   XP_038339425
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,427,159 - 41,049,600 (+)NCBI
RefSeq Acc Id: XM_038483498   ⟹   XP_038339426
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,427,159 - 41,049,600 (+)NCBI
RefSeq Acc Id: XM_038483499   ⟹   XP_038339427
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,427,159 - 41,049,600 (+)NCBI
RefSeq Acc Id: XM_038483500   ⟹   XP_038339428
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,427,159 - 41,049,600 (+)NCBI
RefSeq Acc Id: XM_038483501   ⟹   XP_038339429
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,427,159 - 41,048,737 (+)NCBI
RefSeq Acc Id: XM_038483502   ⟹   XP_038339430
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,427,159 - 41,049,600 (+)NCBI
RefSeq Acc Id: XM_038483503   ⟹   XP_038339431
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,427,159 - 41,048,737 (+)NCBI
RefSeq Acc Id: XM_038483504   ⟹   XP_038339432
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,427,159 - 41,049,600 (+)NCBI
RefSeq Acc Id: XM_038483505   ⟹   XP_038339433
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,427,159 - 41,048,737 (+)NCBI
RefSeq Acc Id: XM_038483506   ⟹   XP_038339434
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,427,159 - 41,048,737 (+)NCBI
RefSeq Acc Id: XM_038483507   ⟹   XP_038339435
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,427,159 - 41,048,737 (+)NCBI
RefSeq Acc Id: XM_038483508   ⟹   XP_038339436
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,742,050 - 41,049,600 (+)NCBI
RefSeq Acc Id: XM_038483509   ⟹   XP_038339437
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,742,072 - 41,049,600 (+)NCBI
RefSeq Acc Id: XM_038483510   ⟹   XP_038339438
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1840,427,159 - 41,049,600 (+)NCBI
RefSeq Acc Id: XM_038544964   ⟹   XP_038400892
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0840,856,432 - 41,482,422 (+)NCBI
RefSeq Acc Id: XM_038544965   ⟹   XP_038400893
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0840,856,432 - 41,482,422 (+)NCBI
RefSeq Acc Id: XM_038544966   ⟹   XP_038400894
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0840,856,432 - 41,482,422 (+)NCBI
RefSeq Acc Id: XM_038544967   ⟹   XP_038400895
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0840,856,432 - 41,482,422 (+)NCBI
RefSeq Acc Id: XM_038544968   ⟹   XP_038400896
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0840,856,432 - 41,481,558 (+)NCBI
RefSeq Acc Id: XM_038544969   ⟹   XP_038400897
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0840,856,432 - 41,482,422 (+)NCBI
RefSeq Acc Id: XM_038544970   ⟹   XP_038400898
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0840,856,432 - 41,481,558 (+)NCBI
RefSeq Acc Id: XM_038544971   ⟹   XP_038400899
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0840,856,432 - 41,482,422 (+)NCBI
RefSeq Acc Id: XM_038544972   ⟹   XP_038400900
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0840,856,432 - 41,481,558 (+)NCBI
RefSeq Acc Id: XM_038544973   ⟹   XP_038400901
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0840,856,432 - 41,481,558 (+)NCBI
RefSeq Acc Id: XM_038544974   ⟹   XP_038400902
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0840,856,432 - 41,481,558 (+)NCBI
RefSeq Acc Id: XM_038544975   ⟹   XP_038400903
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0841,170,653 - 41,482,422 (+)NCBI
RefSeq Acc Id: XM_038544976   ⟹   XP_038400904
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0841,170,675 - 41,482,422 (+)NCBI
RefSeq Acc Id: XM_038544977   ⟹   XP_038400905
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0840,856,432 - 41,482,422 (+)NCBI
RefSeq Acc Id: XM_038589459   ⟹   XP_038445387
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha840,270,522 - 40,894,881 (+)NCBI
RefSeq Acc Id: XM_038589463   ⟹   XP_038445391
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha840,270,522 - 40,894,881 (+)NCBI
RefSeq Acc Id: XM_038589467   ⟹   XP_038445395
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha840,584,429 - 40,895,744 (+)NCBI
RefSeq Acc Id: XM_038589473   ⟹   XP_038445401
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha840,270,522 - 40,895,744 (+)NCBI
RefSeq Acc Id: XM_038609077   ⟹   XP_038465005
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,497,926 - 41,123,844 (+)NCBI
RefSeq Acc Id: XM_038609078   ⟹   XP_038465006
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,497,926 - 41,123,844 (+)NCBI
RefSeq Acc Id: XM_038609079   ⟹   XP_038465007
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,497,926 - 41,123,844 (+)NCBI
RefSeq Acc Id: XM_038609080   ⟹   XP_038465008
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,497,926 - 41,123,844 (+)NCBI
RefSeq Acc Id: XM_038609081   ⟹   XP_038465009
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,497,926 - 41,122,982 (+)NCBI
RefSeq Acc Id: XM_038609082   ⟹   XP_038465010
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,497,926 - 41,123,844 (+)NCBI
RefSeq Acc Id: XM_038609083   ⟹   XP_038465011
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,497,926 - 41,122,982 (+)NCBI
RefSeq Acc Id: XM_038609084   ⟹   XP_038465012
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,497,926 - 41,123,844 (+)NCBI
RefSeq Acc Id: XM_038609085   ⟹   XP_038465013
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,497,926 - 41,122,982 (+)NCBI
RefSeq Acc Id: XM_038609086   ⟹   XP_038465014
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,497,926 - 41,122,982 (+)NCBI
RefSeq Acc Id: XM_038609087   ⟹   XP_038465015
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,497,926 - 41,122,982 (+)NCBI
RefSeq Acc Id: XM_038609088   ⟹   XP_038465016
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,812,289 - 41,123,844 (+)NCBI
RefSeq Acc Id: XM_038609089   ⟹   XP_038465017
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,812,311 - 41,123,844 (+)NCBI
RefSeq Acc Id: XM_038609090   ⟹   XP_038465018
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0840,497,926 - 41,123,844 (+)NCBI
RefSeq Acc Id: XM_038673880   ⟹   XP_038529808
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0840,807,578 - 41,430,716 (+)NCBI
RefSeq Acc Id: XM_038673881   ⟹   XP_038529809
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0840,807,578 - 41,430,716 (+)NCBI
RefSeq Acc Id: XM_038673882   ⟹   XP_038529810
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0840,807,578 - 41,430,716 (+)NCBI
RefSeq Acc Id: XM_038673883   ⟹   XP_038529811
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0840,807,578 - 41,430,716 (+)NCBI
RefSeq Acc Id: XM_038673884   ⟹   XP_038529812
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0840,807,578 - 41,429,853 (+)NCBI
RefSeq Acc Id: XM_038673885   ⟹   XP_038529813
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0840,807,578 - 41,430,716 (+)NCBI
RefSeq Acc Id: XM_038673886   ⟹   XP_038529814
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0840,807,578 - 41,429,853 (+)NCBI
RefSeq Acc Id: XM_038673887   ⟹   XP_038529815
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0840,807,578 - 41,430,716 (+)NCBI
RefSeq Acc Id: XM_038673889   ⟹   XP_038529817
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0840,807,578 - 41,429,853 (+)NCBI
RefSeq Acc Id: XM_038673890   ⟹   XP_038529818
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0840,807,578 - 41,429,853 (+)NCBI
RefSeq Acc Id: XM_038673891   ⟹   XP_038529819
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0840,807,578 - 41,429,853 (+)NCBI
RefSeq Acc Id: XM_038673892   ⟹   XP_038529820
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0841,123,435 - 41,430,716 (+)NCBI
RefSeq Acc Id: XM_038673893   ⟹   XP_038529821
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0841,123,457 - 41,430,716 (+)NCBI
RefSeq Acc Id: XM_038673894   ⟹   XP_038529822
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0840,807,578 - 41,430,716 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003435079 (Get FASTA)   NCBI Sequence Viewer  
  XP_003435080 (Get FASTA)   NCBI Sequence Viewer  
  XP_005623587 (Get FASTA)   NCBI Sequence Viewer  
  XP_005623590 (Get FASTA)   NCBI Sequence Viewer  
  XP_013971452 (Get FASTA)   NCBI Sequence Viewer  
  XP_022277829 (Get FASTA)   NCBI Sequence Viewer  
  XP_022277830 (Get FASTA)   NCBI Sequence Viewer  
  XP_022277831 (Get FASTA)   NCBI Sequence Viewer  
  XP_022277832 (Get FASTA)   NCBI Sequence Viewer  
  XP_022277833 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339425 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339426 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339427 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339428 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339429 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339430 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339431 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339432 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339433 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339434 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339435 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339436 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339437 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339438 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400892 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400893 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400894 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400895 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400896 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400897 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400898 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400899 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400900 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400901 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400902 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400903 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400904 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400905 (Get FASTA)   NCBI Sequence Viewer  
  XP_038445387 (Get FASTA)   NCBI Sequence Viewer  
  XP_038445391 (Get FASTA)   NCBI Sequence Viewer  
  XP_038445395 (Get FASTA)   NCBI Sequence Viewer  
  XP_038445401 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465005 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465006 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465007 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465008 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465009 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465010 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465011 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465012 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465013 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465014 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465015 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465016 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465017 (Get FASTA)   NCBI Sequence Viewer  
  XP_038465018 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529808 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529809 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529810 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529811 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529812 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529813 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529814 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529815 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529817 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529818 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529819 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529820 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529821 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529822 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005623587   ⟸   XM_005623530
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005623590   ⟸   XM_005623533
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_013971452   ⟸   XM_014115977
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_003435079   ⟸   XM_003435031
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_003435080   ⟸   XM_003435032
- Peptide Label: isoform X11
- Sequence:
RefSeq Acc Id: XP_022277831   ⟸   XM_022422123
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_022277829   ⟸   XM_022422121
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_022277830   ⟸   XM_022422122
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_022277832   ⟸   XM_022422124
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_022277833   ⟸   XM_022422125
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: ENSCAFP00000065814   ⟸   ENSCAFT00000064690
RefSeq Acc Id: ENSCAFP00000050393   ⟸   ENSCAFT00000060290
RefSeq Acc Id: ENSCAFP00000024029   ⟸   ENSCAFT00000025873
RefSeq Acc Id: ENSCAFP00000024031   ⟸   ENSCAFT00000025875
RefSeq Acc Id: ENSCAFP00000043799   ⟸   ENSCAFT00000077872
RefSeq Acc Id: ENSCAFP00000065237   ⟸   ENSCAFT00000068266
RefSeq Acc Id: XP_038339425   ⟸   XM_038483497
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038339426   ⟸   XM_038483498
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038339428   ⟸   XM_038483500
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038339430   ⟸   XM_038483502
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038339438   ⟸   XM_038483510
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038339427   ⟸   XM_038483499
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038339432   ⟸   XM_038483504
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038339429   ⟸   XM_038483501
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038339434   ⟸   XM_038483506
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038339431   ⟸   XM_038483503
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038339433   ⟸   XM_038483505
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038339435   ⟸   XM_038483507
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038339436   ⟸   XM_038483508
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038339437   ⟸   XM_038483509
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038465005   ⟸   XM_038609077
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038465006   ⟸   XM_038609078
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038465008   ⟸   XM_038609080
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038465010   ⟸   XM_038609082
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038465018   ⟸   XM_038609090
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038465007   ⟸   XM_038609079
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038465012   ⟸   XM_038609084
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038465009   ⟸   XM_038609081
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038465014   ⟸   XM_038609086
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038465011   ⟸   XM_038609083
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038465013   ⟸   XM_038609085
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038465015   ⟸   XM_038609087
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038465016   ⟸   XM_038609088
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038465017   ⟸   XM_038609089
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038529808   ⟸   XM_038673880
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038529809   ⟸   XM_038673881
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038529811   ⟸   XM_038673883
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038529813   ⟸   XM_038673885
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038529822   ⟸   XM_038673894
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038529810   ⟸   XM_038673882
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038529815   ⟸   XM_038673887
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038529812   ⟸   XM_038673884
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038529818   ⟸   XM_038673890
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038529814   ⟸   XM_038673886
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038529817   ⟸   XM_038673889
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038529819   ⟸   XM_038673891
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038529820   ⟸   XM_038673892
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038529821   ⟸   XM_038673893
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038445401   ⟸   XM_038589473
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038445391   ⟸   XM_038589463
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038445387   ⟸   XM_038589459
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038445395   ⟸   XM_038589467
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038400892   ⟸   XM_038544964
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038400893   ⟸   XM_038544965
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038400895   ⟸   XM_038544967
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038400897   ⟸   XM_038544969
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038400905   ⟸   XM_038544977
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038400894   ⟸   XM_038544966
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038400899   ⟸   XM_038544971
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038400896   ⟸   XM_038544968
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038400901   ⟸   XM_038544973
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038400898   ⟸   XM_038544970
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038400900   ⟸   XM_038544972
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038400902   ⟸   XM_038544974
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038400903   ⟸   XM_038544975
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038400904   ⟸   XM_038544976
- Peptide Label: isoform X12
RefSeq Acc Id: ENSCAFP00845004395   ⟸   ENSCAFT00845005539
RefSeq Acc Id: ENSCAFP00845004435   ⟸   ENSCAFT00845005592
RefSeq Acc Id: ENSCAFP00845004322   ⟸   ENSCAFT00845005435
RefSeq Acc Id: ENSCAFP00845004310   ⟸   ENSCAFT00845005421
RefSeq Acc Id: ENSCAFP00845004354   ⟸   ENSCAFT00845005477
RefSeq Acc Id: ENSCAFP00845004274   ⟸   ENSCAFT00845005365
RefSeq Acc Id: ENSCAFP00845004363   ⟸   ENSCAFT00845005492
Protein Domains
MoCF_biosynth

Promoters
RGD ID:13684247
Promoter ID:EPDNEW_C2317
Type:initiation region
Name:GPHN_1
Description:gephyrin
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1840,586,053 - 40,586,113EPDNEW
Damaging Variants


Assembly: CanFam3.1

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain
8 40630995 40630996 G A snv Border Collie (BC518), Bearded Collie (BD016), Bearded Collie (BD036), Chinese indigenous dogs (YJ9), Bearded Collie (BD052), Bearded Collie (BD085), Bearded Collie (BD089), Bearded Collie (BD091), Bearded Collie (BD093), Bearded Collie (BD098), Bullmastiff (BU002), Cairn Terrier (CE073), Cavalier King Charles Spaniel (CK006), Cavalier King Charles Spaniel (CK023), Curly Coated Retriever (CR039), Chinese indigenous dogs (DQ1), Chinese indigenous dogs (DQ10), Chinese indigenous dogs (DQ2), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ5), Chinese indigenous dogs (DQ6), Chinese indigenous dogs (DQ7), Chinese indigenous dogs (DQ9), German Shepherd/Mixed breed (DS032), Entlebucher Sennenhund (EN091), Entlebucher Sennenhund (EN154), Entlebucher Sennenhund (EN221), Entlebucher Sennenhund (EN247), Entlebucher Sennenhund (EN261), Entlebucher Sennenhund (EN262), Entlebucher Sennenhund (EN263), Entlebucher Sennenhund (EN264), French Bulldog (FB065), Greyhound (GY432), Irish Terrier (IT221), Kunming Dog (KM10), Chinese indigenous dogs (LJ1), Chinese indigenous dogs (LJ2), Chinese indigenous dogs (LJ4), Chinese indigenous dogs (LJ5), Chinese indigenous dogs (LJ6), Chinese indigenous dogs (LJ9), Mixed Breed (MI016), Rhodesian Ridgeback (RR123), Cavalier King Charles Spaniel (SID00101), Border Terrier (SRS932144), Tibetan Mastiff (TM1), Tibetan Mastiff (TM2), Tibetan Mastiff (TM3), Tibetan Mastiff (TM4), Tibetan Mastiff (TM5), Tibetan Mastiff (TM6), Tibetan Mastiff (TM7), West Highland White Terrier (WW174), West Highland White Terrier (WW361), West Highland White Terrier (WW362), West Highland White Terrier (WW363), West Highland White Terrier (WW364), West Highland White Terrier (WW558), West Highland White Terrier (WW64), Chinese indigenous dogs (YJ2), Chinese indigenous dogs (YJ4), Chinese indigenous dogs (YJ5), Chinese indigenous dogs (YJ6), Chinese indigenous dogs (YJ7)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000016305 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030017320 UniProtKB/TrEMBL
  ENSCAFG00040009510 UniProtKB/TrEMBL
  ENSCAFG00845003022 Ensembl, ENTREZGENE
Ensembl Protein ENSCAFP00000024029 UniProtKB/TrEMBL
  ENSCAFP00000024031 UniProtKB/TrEMBL
  ENSCAFP00000043799 UniProtKB/TrEMBL
  ENSCAFP00000050393 UniProtKB/TrEMBL
  ENSCAFP00000065237 UniProtKB/TrEMBL
  ENSCAFP00000065814 UniProtKB/TrEMBL
  ENSCAFP00030027892 UniProtKB/TrEMBL
  ENSCAFP00030028050 UniProtKB/TrEMBL
  ENSCAFP00030028216 UniProtKB/TrEMBL
  ENSCAFP00030028354 UniProtKB/TrEMBL
  ENSCAFP00030028511 UniProtKB/TrEMBL
  ENSCAFP00030028553 UniProtKB/TrEMBL
  ENSCAFP00030028695 UniProtKB/TrEMBL
  ENSCAFP00030028885 UniProtKB/TrEMBL
  ENSCAFP00040015373 UniProtKB/TrEMBL
  ENSCAFP00040015540 UniProtKB/TrEMBL
  ENSCAFP00040015723 UniProtKB/TrEMBL
  ENSCAFP00040015831 UniProtKB/TrEMBL
  ENSCAFP00040016013 UniProtKB/TrEMBL
  ENSCAFP00040016190 UniProtKB/TrEMBL
  ENSCAFP00040016258 UniProtKB/TrEMBL
  ENSCAFP00040016403 UniProtKB/TrEMBL
  ENSCAFP00040016448 UniProtKB/TrEMBL
  ENSCAFP00845004274 ENTREZGENE
  ENSCAFP00845004322 ENTREZGENE
  ENSCAFP00845004363 ENTREZGENE
  ENSCAFP00845004395 ENTREZGENE
  ENSCAFP00845004435 ENTREZGENE
Ensembl Transcript ENSCAFT00000025873 UniProtKB/TrEMBL
  ENSCAFT00000025875 UniProtKB/TrEMBL
  ENSCAFT00000060290 UniProtKB/TrEMBL
  ENSCAFT00000064690 UniProtKB/TrEMBL
  ENSCAFT00000068266 UniProtKB/TrEMBL
  ENSCAFT00000077872 UniProtKB/TrEMBL
  ENSCAFT00030031991 UniProtKB/TrEMBL
  ENSCAFT00030032157 UniProtKB/TrEMBL
  ENSCAFT00030032354 UniProtKB/TrEMBL
  ENSCAFT00030032509 UniProtKB/TrEMBL
  ENSCAFT00030032678 UniProtKB/TrEMBL
  ENSCAFT00030032728 UniProtKB/TrEMBL
  ENSCAFT00030032895 UniProtKB/TrEMBL
  ENSCAFT00030033111 UniProtKB/TrEMBL
  ENSCAFT00040017712 UniProtKB/TrEMBL
  ENSCAFT00040017898 UniProtKB/TrEMBL
  ENSCAFT00040018111 UniProtKB/TrEMBL
  ENSCAFT00040018241 UniProtKB/TrEMBL
  ENSCAFT00040018445 UniProtKB/TrEMBL
  ENSCAFT00040018660 UniProtKB/TrEMBL
  ENSCAFT00040018734 UniProtKB/TrEMBL
  ENSCAFT00040018908 UniProtKB/TrEMBL
  ENSCAFT00040018959 UniProtKB/TrEMBL
  ENSCAFT00845005365 ENTREZGENE
  ENSCAFT00845005435 ENTREZGENE
  ENSCAFT00845005492 ENTREZGENE
  ENSCAFT00845005539 ENTREZGENE
  ENSCAFT00845005592 ENTREZGENE
Gene3D-CATH 2.40.340.10 UniProtKB/TrEMBL
  3.40.980.10 UniProtKB/TrEMBL
InterPro MoaB/Mog-like_dom_sf UniProtKB/TrEMBL
  MoaB/Mog_dom UniProtKB/TrEMBL
  MoCF_biosynth_CS UniProtKB/TrEMBL
  MoeA-like UniProtKB/TrEMBL
  MoeA_C_domain_IV UniProtKB/TrEMBL
  MoeA_C_domain_IV_sf UniProtKB/TrEMBL
  MoeA_linker/N UniProtKB/TrEMBL
  MoeA_linker/N_sf UniProtKB/TrEMBL
NCBI Gene GPHN ENTREZGENE
PANTHER PTHR10192 UniProtKB/TrEMBL
Pfam MoCF_biosynth UniProtKB/TrEMBL
  MoeA_C UniProtKB/TrEMBL
  MoeA_N UniProtKB/TrEMBL
PROSITE MOCF_BIOSYNTHESIS_1 UniProtKB/TrEMBL
  MOCF_BIOSYNTHESIS_2 UniProtKB/TrEMBL
SMART MoCF_biosynth UniProtKB/TrEMBL
Superfamily-SCOP SSF53218 UniProtKB/TrEMBL
  SSF63867 UniProtKB/TrEMBL
  SSF63882 UniProtKB/TrEMBL
TIGRFAMs molyb_syn UniProtKB/TrEMBL
UniProt A0A5F4BPU5_CANLF UniProtKB/TrEMBL
  A0A5F4CBY3_CANLF UniProtKB/TrEMBL
  A0A5F4DEX2_CANLF UniProtKB/TrEMBL
  A0A5F4DGI1_CANLF UniProtKB/TrEMBL
  A0A8C0NQC6_CANLF UniProtKB/TrEMBL
  A0A8C0NSQ0_CANLF UniProtKB/TrEMBL
  A0A8C0NU93_CANLF UniProtKB/TrEMBL
  A0A8C0RMK8_CANLF UniProtKB/TrEMBL
  A0A8C0S3Q8_CANLF UniProtKB/TrEMBL
  A0A8C0S447_CANLF UniProtKB/TrEMBL
  A0A8C0S4J1_CANLF UniProtKB/TrEMBL
  A0A8C0S5G0_CANLF UniProtKB/TrEMBL
  A0A8C0S5N3_CANLF UniProtKB/TrEMBL
  A0A8C0S5U8_CANLF UniProtKB/TrEMBL
  E2R024_CANLF UniProtKB/TrEMBL
  E2R034_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:41380 ENTREZGENE