SKA2 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 9 | 33,692,089 - 33,728,398 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 33,692,302 - 33,728,281 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 32,925,938 - 32,962,035 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 34,497,651 - 34,533,814 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 34,495,485 - 34,533,816 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 33,283,420 - 33,319,561 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 33,572,430 - 33,608,584 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 33,659,101 - 33,695,267 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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SKA2 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 17 | 59,109,857 - 59,155,186 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 17 | 59,109,857 - 59,155,260 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 17 | 57,187,218 - 57,232,547 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 17 | 54,542,090 - 54,587,582 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 17 | 54,543,742 - 54,587,343 | NCBI | | | | | Celera | 17 | 53,649,948 - 53,695,816 (-) | NCBI | | Celera | | | Cytogenetic Map | 17 | q22 | NCBI | | | | | HuRef | 17 | 52,547,893 - 52,593,823 (-) | NCBI | | HuRef | | | CHM1_1 | 17 | 57,252,805 - 57,298,295 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 17 | 59,977,953 - 60,023,284 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Ska2 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 11 | 87,000,087 - 87,013,800 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 11 | 87,000,060 - 87,015,461 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 11 | 87,109,261 - 87,122,974 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 11 | 87,109,234 - 87,124,635 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 11 | 86,922,763 - 86,936,476 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 11 | 86,925,456 - 86,939,169 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 11 | 96,711,276 - 96,725,039 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | C | NCBI | | | | | cM Map | 11 | 51.91 | NCBI | | | | |
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Ska2 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 10 | 72,418,707 - 72,436,721 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 10 | 71,921,474 - 71,939,461 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 10 | 71,921,582 - 71,939,458 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 10 | 76,532,084 - 76,549,889 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 10 | 76,036,988 - 76,054,793 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 10 | 71,501,512 - 71,519,317 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 10 | 74,413,989 - 74,431,922 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 10 | 74,413,989 - 74,431,922 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 10 | 75,668,741 - 75,686,674 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 10 | 75,383,081 - 75,400,888 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 10 | 75,397,450 - 75,415,258 (+) | NCBI | | | | | Celera | 10 | 70,837,768 - 70,855,580 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q26 | NCBI | | | | |
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Ska2 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955451 | 3,839,978 - 3,862,200 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SKA2 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 19 | 75,277,226 - 75,322,545 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 17 | 80,090,268 - 80,133,900 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 17 | 53,181,345 - 53,226,761 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 17 | 58,030,137 - 58,076,113 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 17 | 58,030,137 - 58,076,113 (-) | Ensembl | panpan1.1 | | panPan2 | |
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Ska2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SKA2 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 12 | 35,396,567 - 35,433,299 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 12 | 35,396,565 - 35,433,294 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 12 | 37,074,628 - 37,111,229 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SKA2 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 16 | 34,266,937 - 34,306,970 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 16 | 34,267,161 - 34,304,686 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666077 | 5,069,273 - 5,109,026 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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