ASL (argininosuccinate lyase) - Rat Genome Database

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Gene: ASL (argininosuccinate lyase) Canis lupus familiaris
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Symbol: ASL
Name: argininosuccinate lyase
RGD ID: 12136920
Description: ENCODES a protein that exhibits argininosuccinate lyase activity (ortholog); identical protein binding (ortholog); INVOLVED IN aging (ortholog); ammonia assimilation cycle (ortholog); argininosuccinate metabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); argininosuccinic aciduria (ortholog); congenital myasthenic syndrome 4C (ortholog); FOUND IN cell body fiber (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog); INTERACTS WITH clofibrate; phenobarbital
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.16768,522 - 779,144 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl6730,358 - 779,424 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha62,468,962 - 2,479,644 (-)NCBI
ROS_Cfam_1.06573,409 - 584,014 (-)NCBI
UMICH_Zoey_3.16517,146 - 527,808 (-)NCBI
UNSW_CanFamBas_1.06511,138 - 521,729 (-)NCBI
UU_Cfam_GSD_1.06682,422 - 693,029 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
ASL
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.16768,522 - 779,144 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl6730,358 - 779,424 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha62,468,962 - 2,479,644 (-)NCBI
ROS_Cfam_1.06573,409 - 584,014 (-)NCBI
UMICH_Zoey_3.16517,146 - 527,808 (-)NCBI
UNSW_CanFamBas_1.06511,138 - 521,729 (-)NCBI
UU_Cfam_GSD_1.06682,422 - 693,029 (-)NCBI
ASL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl766,075,800 - 66,094,697 (+)EnsemblGRCh38hg38GRCh38
GRCh38766,075,819 - 66,093,576 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37765,540,806 - 65,558,563 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36765,178,211 - 65,195,765 (+)NCBINCBI36hg18NCBI36
Build 34764,984,963 - 65,002,090NCBI
Celera766,555,388 - 66,572,941 (-)NCBI
Cytogenetic Map7q11.21ENTREZGENE
HuRef761,727,625 - 61,745,174 (+)NCBIHuRef
CHM1_1765,636,440 - 65,653,994 (+)NCBICHM1_1
CRA_TCAGchr7v2764,878,281 - 64,895,827 (+)NCBI
Asl
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395130,040,099 - 130,053,222 (-)NCBIGRCm39mm39
GRCm39 Ensembl5130,040,099 - 130,058,088 (-)Ensembl
GRCm385130,011,258 - 130,024,381 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5130,011,258 - 130,029,247 (-)EnsemblGRCm38mm10GRCm38
MGSCv375130,487,373 - 130,500,201 (-)NCBIGRCm37mm9NCBIm37
MGSCv365130,296,206 - 130,309,034 (-)NCBImm8
Celera5127,015,654 - 127,028,488 (-)NCBICelera
Cytogenetic Map5G1.3NCBI
cM Map568.37NCBI
Asl
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21226,659,664 - 26,677,136 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1226,659,565 - 26,679,662 (+)Ensembl
Rnor_6.01230,160,922 - 30,178,348 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1230,165,694 - 30,178,341 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01232,097,760 - 32,115,110 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41227,702,882 - 27,720,230 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11227,570,168 - 27,583,445 (+)NCBI
Celera1228,373,639 - 28,390,987 (+)NCBICelera
Cytogenetic Map12q12NCBI
Asl
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554568,409,767 - 8,419,915 (-)NCBIChiLan1.0ChiLan1.0
ASL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1773,142,764 - 73,157,472 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl773,142,842 - 73,157,472 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0759,971,529 - 59,988,722 (-)NCBIMhudiblu_PPA_v0panPan3
Asl
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344126,336,725 - 126,347,816 (-)NCBI
SpeTri2.0NW_0049365437,688,788 - 7,699,842 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ASL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl316,637,481 - 16,646,869 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1316,637,481 - 16,646,869 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2316,889,701 - 16,899,549 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ASL
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1281,782,434 - 1,800,581 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl281,782,553 - 1,802,517 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607014,846,508 - 14,865,029 (-)NCBIVero_WHO_p1.0
Asl
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247408,414,664 - 8,423,797 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_014114145   ⟹   XP_013969620
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.16768,522 - 779,144 (-)NCBI
Dog10K_Boxer_Tasha62,468,962 - 2,479,644 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038477742   ⟹   XP_038333670
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.16517,146 - 527,808 (-)NCBI
RefSeq Acc Id: XM_038477743   ⟹   XP_038333671
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.16517,146 - 527,808 (-)NCBI
RefSeq Acc Id: XM_038538989   ⟹   XP_038394917
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.06682,422 - 693,029 (-)NCBI
RefSeq Acc Id: XM_038538990   ⟹   XP_038394918
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.06682,422 - 693,029 (-)NCBI
RefSeq Acc Id: XM_038603083   ⟹   XP_038459011
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.06511,138 - 521,729 (-)NCBI
RefSeq Acc Id: XM_038603084   ⟹   XP_038459012
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.06511,138 - 521,729 (-)NCBI
RefSeq Acc Id: XM_038667788   ⟹   XP_038523716
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.06573,409 - 584,014 (-)NCBI
RefSeq Acc Id: XM_038667789   ⟹   XP_038523717
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.06573,409 - 584,014 (-)NCBI
RefSeq Acc Id: XM_536832   ⟹   XP_536832
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.16768,522 - 779,144 (-)NCBI
Dog10K_Boxer_Tasha62,468,962 - 2,479,644 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: XP_013969620   ⟸   XM_014114145
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_536832   ⟸   XM_536832
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_038333671   ⟸   XM_038477743
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038333670   ⟸   XM_038477742
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038459012   ⟸   XM_038603084
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038459011   ⟸   XM_038603083
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038523717   ⟸   XM_038667789
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038523716   ⟸   XM_038667788
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038394918   ⟸   XM_038538990
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038394917   ⟸   XM_038538989
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000010193 Ensembl
NCBI Gene ASL ENTREZGENE