PAH (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 15 | 41,590,253 - 41,670,156 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 15 | 41,592,876 - 41,670,837 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 15 | 41,957,869 - 42,038,236 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 15 | 42,245,356 - 42,325,951 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 15 | 42,247,178 - 42,350,533 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 15 | 41,514,955 - 41,595,406 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 15 | 41,612,701 - 41,693,246 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 15 | 41,882,259 - 41,962,824 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
PAH (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 12 | 102,836,889 - 102,958,441 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 12 | 102,836,889 - 102,958,410 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 12 | 103,230,667 - 103,352,219 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 12 | 101,756,234 - 101,835,511 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 12 | 101,734,570 - 101,813,848 | NCBI | | | | | Celera | 12 | 102,896,051 - 102,975,653 (-) | NCBI | | Celera | | | Cytogenetic Map | 12 | q23.2 | NCBI | | | | | HuRef | 12 | 100,291,597 - 100,370,682 (-) | NCBI | | HuRef | | | CHM1_1 | 12 | 103,199,004 - 103,278,175 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 12 | 102,797,868 - 102,919,265 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Pah (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 10 | 87,357,657 - 87,419,999 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 10 | 87,357,657 - 87,419,998 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 10 | 87,521,795 - 87,584,137 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 10 | 87,521,795 - 87,584,136 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 10 | 86,984,540 - 87,046,882 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 10 | 86,951,768 - 87,013,930 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 10 | 89,475,828 - 89,562,695 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | C1 | NCBI | | | | | cM Map | 10 | 43.64 | NCBI | | | | |
|
Pah (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 7 | 23,793,096 - 23,885,631 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 7 | 21,933,179 - 21,998,134 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 7 | 21,933,179 - 21,998,130 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 7 | 23,927,881 - 23,992,835 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 7 | 26,090,559 - 26,155,515 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 7 | 25,867,639 - 25,932,579 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 7 | 28,066,639 - 28,129,772 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 7 | 28,066,635 - 28,129,769 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 7 | 28,180,707 - 28,245,428 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 7 | 24,175,898 - 24,243,592 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 7 | 24,196,183 - 24,263,859 (+) | NCBI | | | | | Celera | 7 | 19,108,301 - 19,168,259 (+) | NCBI | | Celera | | | RH 3.4 Map | 7 | 119.56 | RGD | | | | | Cytogenetic Map | 7 | q13 | NCBI | | | | |
|
Pah (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955405 | 37,846,354 - 37,909,457 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955405 | 37,848,486 - 37,909,163 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
PAH (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 10 | 110,904,004 - 110,982,422 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 12 | 110,900,401 - 110,978,818 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 12 | 100,417,267 - 100,496,888 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 12 | 103,811,761 - 103,891,726 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 12 | 103,811,761 - 103,891,726 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
Pah (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404945 | 18,306,664 - 18,401,497 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936492 | 11,342,518 - 11,412,209 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936492 | 11,342,566 - 11,412,323 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
PAH (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 5 | 81,385,435 - 81,463,451 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 5 | 81,385,401 - 81,460,569 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 5 | 85,200,848 - 85,228,826 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
PAH (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 11 | 98,065,869 - 98,140,011 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 11 | 98,063,199 - 98,139,285 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666037 | 146,870,938 - 146,945,036 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|
Pah (Heterocephalus glaber - naked mole-rat) |
|