HDAC8 (histone deacetylase 8) - Rat Genome Database

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Gene: HDAC8 (histone deacetylase 8) Canis lupus familiaris
Analyze
Symbol: HDAC8
Name: histone deacetylase 8
RGD ID: 12135951
Description: ENCODES a protein that exhibits chromatin binding (ortholog); deacetylase activity (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN cellular response to forskolin (ortholog); cellular response to trichostatin A (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH amphetamine abuse (ortholog); atrial heart septal defect (ortholog); autistic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X56,357,205 - 56,574,443 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX56,357,177 - 56,574,401 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX47,183,095 - 47,400,619 (-)NCBI
ROS_Cfam_1.0X57,411,265 - 57,628,877 (-)NCBI
UMICH_Zoey_3.1X55,325,722 - 55,544,604 (-)NCBI
UNSW_CanFamBas_1.0X56,723,145 - 56,940,470 (-)NCBI
UU_Cfam_GSD_1.0X56,571,889 - 56,789,465 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
HDAC8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X56,357,205 - 56,574,443 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX56,357,177 - 56,574,401 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX47,183,095 - 47,400,619 (-)NCBI
ROS_Cfam_1.0X57,411,265 - 57,628,877 (-)NCBI
UMICH_Zoey_3.1X55,325,722 - 55,544,604 (-)NCBI
UNSW_CanFamBas_1.0X56,723,145 - 56,940,470 (-)NCBI
UU_Cfam_GSD_1.0X56,571,889 - 56,789,465 (-)NCBI
HDAC8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 EnsemblX72,329,516 - 72,573,101 (-)EnsemblGRCh38hg38GRCh38
GRCh38X72,329,516 - 72,573,099 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X71,549,366 - 71,792,693 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X71,466,091 - 71,709,378 (-)NCBINCBI36hg18NCBI36
Build 34X71,332,387 - 71,575,674NCBI
CeleraX71,892,584 - 72,136,175 (-)NCBI
Cytogenetic MapXq13.1NCBI
HuRefX65,303,729 - 65,547,461 (-)NCBIHuRef
CHM1_1X71,442,370 - 71,685,931 (-)NCBICHM1_1
Hdac8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X101,328,244 - 101,549,005 (-)NCBIGRCm39mm39
GRCm39 EnsemblX101,328,245 - 101,548,965 (-)Ensembl
GRCm38X102,284,638 - 102,505,381 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX102,284,639 - 102,505,359 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X99,479,979 - 99,700,487 (-)NCBIGRCm37mm9NCBIm37
MGSCv36X98,487,359 - 98,707,867 (-)NCBImm8
CeleraX89,195,856 - 89,416,063 (-)NCBICelera
Cytogenetic MapXDNCBI
Hdac8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X67,385,288 - 67,593,014 (-)NCBImRatBN7.2
mRatBN7.2 EnsemblX67,385,289 - 67,592,923 (-)Ensembl
Rnor_6.0X72,163,777 - 72,370,058 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX72,163,777 - 72,370,044 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X73,566,613 - 73,589,000 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0X73,694,610 - 73,698,948 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X90,336,001 - 90,544,511 (-)NCBIRGSC3.4rn4RGSC3.4
CeleraX67,738,891 - 67,946,303 (-)NCBICelera
Cytogenetic MapXq22NCBI
Hdac8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495547511,748,502 - 12,012,884 (-)NCBIChiLan1.0ChiLan1.0
HDAC8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X71,649,178 - 71,894,896 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v0X61,565,790 - 61,811,588 (-)NCBIMhudiblu_PPA_v0panPan3
Hdac8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X45,327,793 - 45,554,498 (+)NCBI
SpeTri2.0NW_0049367621,425,337 - 1,652,058 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HDAC8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1X58,210,182 - 58,450,681 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
HDAC8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X62,154,374 - 62,393,149 (-)NCBIChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660654,003,868 - 4,261,439 (-)NCBIVero_WHO_p1.0
Hdac8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249032,620,571 - 2,852,247 (-)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 4 3
Low 5 5 18 6 6 6 6 6 9 2 10 6
Below cutoff 6

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005641489 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005641490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005641491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005641492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005641493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038450299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038464505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038523752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038587719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038652237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038652238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038652239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038652240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038652241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038652242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_853976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005352212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000387 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000027174   ⟹   ENSCAFP00000025273
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX56,482,626 - 56,574,401 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000048263   ⟹   ENSCAFP00000040790
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX56,357,177 - 56,574,401 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000072938   ⟹   ENSCAFP00000047545
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX56,387,678 - 56,574,401 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000077481   ⟹   ENSCAFP00000046071
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX56,483,374 - 56,574,401 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000079986   ⟹   ENSCAFP00000050112
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX56,357,177 - 56,574,401 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000081175   ⟹   ENSCAFP00000065000
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX56,482,450 - 56,574,401 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000083322   ⟹   ENSCAFP00000062632
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX56,357,177 - 56,574,401 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000091013   ⟹   ENSCAFP00000060691
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 EnsemblX56,387,678 - 56,574,401 (-)Ensembl
RefSeq Acc Id: XM_005641489   ⟹   XP_005641546
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X56,481,721 - 56,574,443 (-)NCBI
Dog10K_Boxer_TashaX47,307,619 - 47,400,619 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005641490   ⟹   XP_005641547
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X56,357,205 - 56,574,442 (-)NCBI
Dog10K_Boxer_TashaX47,183,095 - 47,400,617 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005641492   ⟹   XP_005641549
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X56,357,206 - 56,574,442 (-)NCBI
Dog10K_Boxer_TashaX47,183,095 - 47,400,614 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005641493   ⟹   XP_005641550
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X56,481,472 - 56,574,442 (-)NCBI
Dog10K_Boxer_TashaX47,305,314 - 47,400,618 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038450294   ⟹   XP_038306222
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X57,535,862 - 57,628,877 (-)NCBI
RefSeq Acc Id: XM_038450295   ⟹   XP_038306223
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X57,411,265 - 57,628,875 (-)NCBI
RefSeq Acc Id: XM_038450296   ⟹   XP_038306224
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X57,535,864 - 57,628,875 (-)NCBI
RefSeq Acc Id: XM_038450297   ⟹   XP_038306225
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X57,411,265 - 57,628,872 (-)NCBI
RefSeq Acc Id: XM_038450298   ⟹   XP_038306226
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X57,411,265 - 57,628,876 (-)NCBI
RefSeq Acc Id: XM_038450299   ⟹   XP_038306227
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0X57,533,560 - 57,628,876 (-)NCBI
RefSeq Acc Id: XM_038464505   ⟹   XP_038320433
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_TashaX47,183,095 - 47,400,618 (-)NCBI
RefSeq Acc Id: XM_038523747   ⟹   XP_038379675
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X55,451,815 - 55,544,604 (-)NCBI
RefSeq Acc Id: XM_038523748   ⟹   XP_038379676
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X55,325,722 - 55,544,602 (-)NCBI
RefSeq Acc Id: XM_038523749   ⟹   XP_038379677
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X55,451,817 - 55,544,602 (-)NCBI
RefSeq Acc Id: XM_038523750   ⟹   XP_038379678
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X55,325,722 - 55,544,599 (-)NCBI
RefSeq Acc Id: XM_038523751   ⟹   XP_038379679
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X55,325,722 - 55,544,603 (-)NCBI
RefSeq Acc Id: XM_038523752   ⟹   XP_038379680
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X55,449,510 - 55,544,603 (-)NCBI
RefSeq Acc Id: XM_038587714   ⟹   XP_038443642
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X56,696,460 - 56,789,465 (-)NCBI
RefSeq Acc Id: XM_038587715   ⟹   XP_038443643
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X56,571,889 - 56,789,463 (-)NCBI
RefSeq Acc Id: XM_038587716   ⟹   XP_038443644
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X56,696,462 - 56,789,463 (-)NCBI
RefSeq Acc Id: XM_038587717   ⟹   XP_038443645
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X56,571,889 - 56,789,460 (-)NCBI
RefSeq Acc Id: XM_038587718   ⟹   XP_038443646
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X56,571,889 - 56,789,464 (-)NCBI
RefSeq Acc Id: XM_038587719   ⟹   XP_038443647
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0X56,694,155 - 56,789,464 (-)NCBI
RefSeq Acc Id: XM_038652237   ⟹   XP_038508165
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X56,847,666 - 56,940,470 (-)NCBI
RefSeq Acc Id: XM_038652238   ⟹   XP_038508166
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X56,723,145 - 56,940,468 (-)NCBI
RefSeq Acc Id: XM_038652239   ⟹   XP_038508167
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X56,847,668 - 56,940,468 (-)NCBI
RefSeq Acc Id: XM_038652240   ⟹   XP_038508168
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X56,723,145 - 56,940,465 (-)NCBI
RefSeq Acc Id: XM_038652241   ⟹   XP_038508169
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X56,723,145 - 56,940,469 (-)NCBI
RefSeq Acc Id: XM_038652242   ⟹   XP_038508170
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0X56,845,361 - 56,940,469 (-)NCBI
RefSeq Acc Id: XM_853976   ⟹   XP_859069
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X56,481,721 - 56,574,442 (-)NCBI
Dog10K_Boxer_TashaX47,307,621 - 47,400,617 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005352212
RefSeq Status:
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1X55,356,361 - 55,544,603 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005641546 (Get FASTA)   NCBI Sequence Viewer  
  XP_005641547 (Get FASTA)   NCBI Sequence Viewer  
  XP_005641549 (Get FASTA)   NCBI Sequence Viewer  
  XP_005641550 (Get FASTA)   NCBI Sequence Viewer  
  XP_038306222 (Get FASTA)   NCBI Sequence Viewer  
  XP_038306223 (Get FASTA)   NCBI Sequence Viewer  
  XP_038306224 (Get FASTA)   NCBI Sequence Viewer  
  XP_038306225 (Get FASTA)   NCBI Sequence Viewer  
  XP_038306226 (Get FASTA)   NCBI Sequence Viewer  
  XP_038306227 (Get FASTA)   NCBI Sequence Viewer  
  XP_038320433 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379675 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379676 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379677 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379678 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379679 (Get FASTA)   NCBI Sequence Viewer  
  XP_038379680 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443642 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443643 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443644 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443645 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443646 (Get FASTA)   NCBI Sequence Viewer  
  XP_038443647 (Get FASTA)   NCBI Sequence Viewer  
  XP_038508165 (Get FASTA)   NCBI Sequence Viewer  
  XP_038508166 (Get FASTA)   NCBI Sequence Viewer  
  XP_038508167 (Get FASTA)   NCBI Sequence Viewer  
  XP_038508168 (Get FASTA)   NCBI Sequence Viewer  
  XP_038508169 (Get FASTA)   NCBI Sequence Viewer  
  XP_038508170 (Get FASTA)   NCBI Sequence Viewer  
  XP_859069 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005641547   ⟸   XM_005641490
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005641549   ⟸   XM_005641492
- Peptide Label: isoform X4
- UniProtKB: J9P5B2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005641546   ⟸   XM_005641489
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_859069   ⟸   XM_853976
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_005641550   ⟸   XM_005641493
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: ENSCAFP00000046071   ⟸   ENSCAFT00000077481
RefSeq Acc Id: ENSCAFP00000040790   ⟸   ENSCAFT00000048263
RefSeq Acc Id: ENSCAFP00000062632   ⟸   ENSCAFT00000083322
RefSeq Acc Id: ENSCAFP00000025273   ⟸   ENSCAFT00000027174
RefSeq Acc Id: ENSCAFP00000047545   ⟸   ENSCAFT00000072938
RefSeq Acc Id: ENSCAFP00000050112   ⟸   ENSCAFT00000079986
RefSeq Acc Id: ENSCAFP00000065000   ⟸   ENSCAFT00000081175
RefSeq Acc Id: ENSCAFP00000060691   ⟸   ENSCAFT00000091013
RefSeq Acc Id: XP_038379679   ⟸   XM_038523751
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038379676   ⟸   XM_038523748
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038379678   ⟸   XM_038523750
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038379680   ⟸   XM_038523752
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038379675   ⟸   XM_038523747
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038379677   ⟸   XM_038523749
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038508169   ⟸   XM_038652241
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038508166   ⟸   XM_038652238
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038508168   ⟸   XM_038652240
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038508170   ⟸   XM_038652242
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038508165   ⟸   XM_038652237
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038508167   ⟸   XM_038652239
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038306226   ⟸   XM_038450298
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038306223   ⟸   XM_038450295
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038306225   ⟸   XM_038450297
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038306227   ⟸   XM_038450299
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038306222   ⟸   XM_038450294
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038306224   ⟸   XM_038450296
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038320433   ⟸   XM_038464505
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038443646   ⟸   XM_038587718
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038443643   ⟸   XM_038587715
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038443645   ⟸   XM_038587717
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038443647   ⟸   XM_038587719
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038443642   ⟸   XM_038587714
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038443644   ⟸   XM_038587716
- Peptide Label: isoform X3

Promoters
RGD ID:13689359
Promoter ID:EPDNEW_C7427
Type:multiple initiation site
Name:HDAC8_1
Description:histone deacetylase 8
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1X56,574,174 - 56,574,234EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000017157 Ensembl
NCBI Gene HDAC8 ENTREZGENE
UniProt J9P5B2 ENTREZGENE
VGNC ID VGNC:50631 ENTREZGENE