GRIA1 (glutamate ionotropic receptor AMPA type subunit 1) - Rat Genome Database

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Gene: GRIA1 (glutamate ionotropic receptor AMPA type subunit 1) Canis lupus familiaris
Analyze
Symbol: GRIA1
Name: glutamate ionotropic receptor AMPA type subunit 1
RGD ID: 12132734
Description: ENCODES a protein that exhibits adenylate cyclase binding (ortholog); amyloid-beta binding (ortholog); beta-2 adrenergic receptor binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); cellular response to amine stimulus (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; Reelin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN asymmetric synapse (ortholog); cell surface (ortholog); cell-cell junction (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: glutamate receptor 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1455,801,269 - 56,103,383 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl455,803,296 - 56,103,669 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha455,639,927 - 55,995,772 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0456,183,572 - 56,538,983 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl456,237,177 - 56,538,754 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1456,012,350 - 56,367,654 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0456,111,546 - 56,466,793 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0456,613,928 - 56,969,631 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
behavioral response to pain  (ISO)
cellular response to amine stimulus  (ISO)
cellular response to amino acid stimulus  (ISO)
cellular response to ammonium ion  (IEA,ISO)
cellular response to brain-derived neurotrophic factor stimulus  (ISO)
cellular response to dsRNA  (ISO)
cellular response to growth factor stimulus  (ISO)
cellular response to L-glutamate  (ISO)
cellular response to organic cyclic compound  (ISO)
cellular response to peptide hormone stimulus  (ISO)
cerebral cortex development  (ISO)
chemical synaptic transmission  (IEA,ISO)
conditioned place preference  (ISO)
ionotropic glutamate receptor signaling pathway  (IEA)
long-term memory  (IEA,ISO)
long-term synaptic depression  (IEA,ISO)
long-term synaptic potentiation  (ISO)
modulation of chemical synaptic transmission  (ISO)
monoatomic ion transmembrane transport  (IEA)
monoatomic ion transport  (IEA)
neuronal action potential  (ISO)
positive regulation of excitatory postsynaptic potential  (ISO)
positive regulation of gene expression  (ISO)
positive regulation of locomotion involved in locomotory behavior  (ISO)
positive regulation of membrane potential  (ISO)
positive regulation of synaptic transmission  (ISO)
receptor internalization  (IEA)
regulation of monoatomic ion transmembrane transport  (ISO)
regulation of postsynaptic membrane potential  (IEA)
regulation of presynaptic membrane potential  (IEA)
regulation of receptor recycling  (ISO)
regulation of synaptic plasticity  (ISO)
response to arsenic-containing substance  (ISO)
response to cocaine  (ISO)
response to electrical stimulus  (ISO)
response to estradiol  (ISO)
response to ethanol  (ISO)
response to fungicide  (ISO)
response to lithium ion  (ISO)
response to morphine  (ISO)
response to nutrient levels  (ISO)
response to peptide hormone  (ISO)
response to psychosocial stress  (ISO)
response to sucrose  (ISO)
response to toxic substance  (ISO)
response to xenobiotic stimulus  (ISO)
spinal cord development  (ISO)
synapse assembly  (IEA)

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
GRIA1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1455,801,269 - 56,103,383 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl455,803,296 - 56,103,669 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha455,639,927 - 55,995,772 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0456,183,572 - 56,538,983 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl456,237,177 - 56,538,754 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1456,012,350 - 56,367,654 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0456,111,546 - 56,466,793 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0456,613,928 - 56,969,631 (-)NCBIUU_Cfam_GSD_1.0
GRIA1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385153,489,615 - 153,813,869 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5153,489,615 - 153,813,869 (+)EnsemblGRCh38hg38GRCh38
GRCh375152,870,230 - 153,193,429 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365152,850,499 - 153,171,354 (+)NCBINCBI36Build 36hg18NCBI36
Build 345152,850,498 - 153,171,354NCBI
Celera5148,945,616 - 149,268,929 (+)NCBICelera
Cytogenetic Map5q33.2NCBI
HuRef5148,010,721 - 148,334,111 (+)NCBIHuRef
CHM1_15152,302,506 - 152,626,274 (+)NCBICHM1_1
T2T-CHM13v2.05154,022,776 - 154,347,051 (+)NCBIT2T-CHM13v2.0
Gria1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391156,902,342 - 57,221,070 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1156,902,213 - 57,221,070 (+)EnsemblGRCm39 Ensembl
GRCm381157,011,571 - 57,330,244 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1157,011,387 - 57,330,244 (+)EnsemblGRCm38mm10GRCm38
MGSCv371156,825,193 - 57,143,746 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361156,855,379 - 57,146,439 (+)NCBIMGSCv36mm8
Celera1161,935,002 - 62,079,468 (+)NCBICelera
Cytogenetic Map11B1.3NCBI
cM Map1134.51NCBI
Gria1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81041,710,540 - 42,030,105 (+)NCBIGRCr8
mRatBN7.21041,210,713 - 41,527,283 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1041,210,713 - 41,527,283 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1045,861,160 - 46,177,214 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01045,351,373 - 45,667,433 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01040,855,030 - 41,171,065 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01042,441,723 - 42,760,200 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1042,614,713 - 42,760,200 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01042,257,736 - 42,571,220 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41042,613,359 - 42,616,610 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1040,506,762 - 40,822,664 (+)NCBICelera
Cytogenetic Map10q22NCBI
Gria1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554087,912,592 - 8,223,570 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554087,912,223 - 8,226,241 (+)NCBIChiLan1.0ChiLan1.0
GRIA1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24148,684,899 - 149,011,988 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15146,824,470 - 147,151,533 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05148,879,996 - 149,206,914 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15154,877,807 - 155,204,660 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5154,879,080 - 155,204,660 (+)Ensemblpanpan1.1panPan2
Gria1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213110,488,036 - 110,787,054 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365158,940,009 - 9,083,151 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365158,937,391 - 9,236,438 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GRIA1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1669,332,587 - 69,655,380 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11669,332,786 - 69,654,366 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21675,191,970 - 75,275,696 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GRIA1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12355,944,128 - 56,265,748 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2356,101,294 - 56,265,849 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603421,402,866 - 21,730,046 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gria1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473335,339,683 - 35,647,349 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473335,337,039 - 35,648,184 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in GRIA1
3193 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 20 14 4 6 4 6 31 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022417778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496896 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038496910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038534966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599261 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_546286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_848305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002625989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000028234   ⟹   ENSCAFP00000026256
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl455,803,296 - 56,103,669 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000028256   ⟹   ENSCAFP00000026278
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl455,803,944 - 56,101,719 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000073933   ⟹   ENSCAFP00000066758
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl455,803,296 - 56,103,669 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000077757   ⟹   ENSCAFP00000056843
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl455,803,944 - 56,103,669 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000086076   ⟹   ENSCAFP00000060301
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl455,803,944 - 56,103,669 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845009059   ⟹   ENSCAFP00845007144
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl456,237,177 - 56,538,754 (-)Ensembl
RefSeq Acc Id: XM_022417778   ⟹   XP_022273486
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1455,801,269 - 56,018,487 (-)NCBI
Dog10K_Boxer_Tasha455,693,488 - 55,910,727 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038473871   ⟹   XP_038329799
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1456,065,924 - 56,367,461 (-)NCBI
RefSeq Acc Id: XM_038473872   ⟹   XP_038329800
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1456,065,924 - 56,367,461 (-)NCBI
RefSeq Acc Id: XM_038473873   ⟹   XP_038329801
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1456,065,924 - 56,367,654 (-)NCBI
RefSeq Acc Id: XM_038473874   ⟹   XP_038329802
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1456,065,924 - 56,282,591 (-)NCBI
RefSeq Acc Id: XM_038473875   ⟹   XP_038329803
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1456,087,005 - 56,367,461 (-)NCBI
RefSeq Acc Id: XM_038473876   ⟹   XP_038329804
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1456,012,350 - 56,367,461 (-)NCBI
RefSeq Acc Id: XM_038496896   ⟹   XP_038352824
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha455,693,488 - 55,995,772 (-)NCBI
RefSeq Acc Id: XM_038496902   ⟹   XP_038352830
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha455,714,591 - 55,995,574 (-)NCBI
RefSeq Acc Id: XM_038496910   ⟹   XP_038352838
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha455,639,927 - 55,995,574 (-)NCBI
RefSeq Acc Id: XM_038534961   ⟹   XP_038390889
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0456,667,477 - 56,969,433 (-)NCBI
RefSeq Acc Id: XM_038534962   ⟹   XP_038390890
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0456,667,477 - 56,969,433 (-)NCBI
RefSeq Acc Id: XM_038534963   ⟹   XP_038390891
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0456,667,477 - 56,969,631 (-)NCBI
RefSeq Acc Id: XM_038534964   ⟹   XP_038390892
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0456,667,477 - 56,884,765 (-)NCBI
RefSeq Acc Id: XM_038534965   ⟹   XP_038390893
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0456,688,583 - 56,969,433 (-)NCBI
RefSeq Acc Id: XM_038534966   ⟹   XP_038390894
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0456,613,928 - 56,969,433 (-)NCBI
RefSeq Acc Id: XM_038599261   ⟹   XP_038455189
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0456,165,192 - 56,466,615 (-)NCBI
RefSeq Acc Id: XM_038599262   ⟹   XP_038455190
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0456,165,192 - 56,466,615 (-)NCBI
RefSeq Acc Id: XM_038599263   ⟹   XP_038455191
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0456,165,192 - 56,466,793 (-)NCBI
RefSeq Acc Id: XM_038599264   ⟹   XP_038455192
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0456,165,192 - 56,382,272 (-)NCBI
RefSeq Acc Id: XM_038599265   ⟹   XP_038455193
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0456,189,510 - 56,466,615 (-)NCBI
RefSeq Acc Id: XM_038599266   ⟹   XP_038455194
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0456,111,546 - 56,466,615 (-)NCBI
RefSeq Acc Id: XM_038663567   ⟹   XP_038519495
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0456,237,146 - 56,538,780 (-)NCBI
RefSeq Acc Id: XM_038663568   ⟹   XP_038519496
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0456,237,146 - 56,538,780 (-)NCBI
RefSeq Acc Id: XM_038663569   ⟹   XP_038519497
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0456,237,146 - 56,538,983 (-)NCBI
RefSeq Acc Id: XM_038663570   ⟹   XP_038519498
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0456,237,146 - 56,453,788 (-)NCBI
RefSeq Acc Id: XM_038663571   ⟹   XP_038519499
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0456,261,435 - 56,538,780 (-)NCBI
RefSeq Acc Id: XM_038663572   ⟹   XP_038519500
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0456,183,572 - 56,538,780 (-)NCBI
RefSeq Acc Id: XM_546286   ⟹   XP_546286
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1455,801,269 - 56,103,383 (-)NCBI
Dog10K_Boxer_Tasha455,693,488 - 55,995,574 (-)NCBI
Sequence:
RefSeq Acc Id: XM_848305   ⟹   XP_853398
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1455,801,269 - 56,103,383 (-)NCBI
Dog10K_Boxer_Tasha455,693,488 - 55,995,574 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_022273486 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329799 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329800 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329801 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329802 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329803 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329804 (Get FASTA)   NCBI Sequence Viewer  
  XP_038352824 (Get FASTA)   NCBI Sequence Viewer  
  XP_038352830 (Get FASTA)   NCBI Sequence Viewer  
  XP_038352838 (Get FASTA)   NCBI Sequence Viewer  
  XP_038390889 (Get FASTA)   NCBI Sequence Viewer  
  XP_038390890 (Get FASTA)   NCBI Sequence Viewer  
  XP_038390891 (Get FASTA)   NCBI Sequence Viewer  
  XP_038390892 (Get FASTA)   NCBI Sequence Viewer  
  XP_038390893 (Get FASTA)   NCBI Sequence Viewer  
  XP_038390894 (Get FASTA)   NCBI Sequence Viewer  
  XP_038455189 (Get FASTA)   NCBI Sequence Viewer  
  XP_038455190 (Get FASTA)   NCBI Sequence Viewer  
  XP_038455191 (Get FASTA)   NCBI Sequence Viewer  
  XP_038455192 (Get FASTA)   NCBI Sequence Viewer  
  XP_038455193 (Get FASTA)   NCBI Sequence Viewer  
  XP_038455194 (Get FASTA)   NCBI Sequence Viewer  
  XP_038519495 (Get FASTA)   NCBI Sequence Viewer  
  XP_038519496 (Get FASTA)   NCBI Sequence Viewer  
  XP_038519497 (Get FASTA)   NCBI Sequence Viewer  
  XP_038519498 (Get FASTA)   NCBI Sequence Viewer  
  XP_038519499 (Get FASTA)   NCBI Sequence Viewer  
  XP_038519500 (Get FASTA)   NCBI Sequence Viewer  
  XP_546286 (Get FASTA)   NCBI Sequence Viewer  
  XP_853398 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000066758.2
  ENSCAFP00030011762.1
  ENSCAFP00030011912.1
  ENSCAFP00030012025.1
  ENSCAFP00040011351.1
  ENSCAFP00040011388.1
  ENSCAFP00040011452.1
  ENSCAFP00845007144
  ENSCAFP00845007144.1
RefSeq Acc Id: XP_546286   ⟸   XM_546286
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LIJ6 (UniProtKB/TrEMBL),   A0A8C0MHS5 (UniProtKB/TrEMBL),   A0A8I3MYK4 (UniProtKB/TrEMBL),   A0A8C0LDQ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_853398   ⟸   XM_848305
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MH98 (UniProtKB/TrEMBL),   A0A8C0R6U5 (UniProtKB/TrEMBL),   A0A8C0LDQ2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022273486   ⟸   XM_022417778
- Peptide Label: isoform X4
- UniProtKB: A0A8C0LDQ2 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000026256   ⟸   ENSCAFT00000028234
Ensembl Acc Id: ENSCAFP00000026278   ⟸   ENSCAFT00000028256
Ensembl Acc Id: ENSCAFP00000056843   ⟸   ENSCAFT00000077757
Ensembl Acc Id: ENSCAFP00000066758   ⟸   ENSCAFT00000073933
Ensembl Acc Id: ENSCAFP00000060301   ⟸   ENSCAFT00000086076
RefSeq Acc Id: XP_038329804   ⟸   XM_038473876
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038329801   ⟸   XM_038473873
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038329799   ⟸   XM_038473871
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038329800   ⟸   XM_038473872
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038329802   ⟸   XM_038473874
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038329803   ⟸   XM_038473875
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038455194   ⟸   XM_038599266
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038455191   ⟸   XM_038599263
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038455189   ⟸   XM_038599261
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038455190   ⟸   XM_038599262
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038455192   ⟸   XM_038599264
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038455193   ⟸   XM_038599265
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038519500   ⟸   XM_038663572
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LDQ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038519497   ⟸   XM_038663569
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LDQ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038519495   ⟸   XM_038663567
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LIJ6 (UniProtKB/TrEMBL),   A0A8C0MHS5 (UniProtKB/TrEMBL),   A0A8I3MYK4 (UniProtKB/TrEMBL),   A0A8C0LDQ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038519496   ⟸   XM_038663568
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MH98 (UniProtKB/TrEMBL),   A0A8C0R6U5 (UniProtKB/TrEMBL),   A0A8C0LDQ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038519498   ⟸   XM_038663570
- Peptide Label: isoform X4
- UniProtKB: A0A8C0LDQ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038519499   ⟸   XM_038663571
- Peptide Label: isoform X5
- UniProtKB: A0A8C0LDQ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038352838   ⟸   XM_038496910
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LDQ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038352824   ⟸   XM_038496896
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LDQ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038352830   ⟸   XM_038496902
- Peptide Label: isoform X5
- UniProtKB: A0A8C0LDQ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390894   ⟸   XM_038534966
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LDQ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390891   ⟸   XM_038534963
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LDQ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390889   ⟸   XM_038534961
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHS5 (UniProtKB/TrEMBL),   A0A8I3MYK4 (UniProtKB/TrEMBL),   A0A8C0LDQ2 (UniProtKB/TrEMBL),   A0A8C0LIJ6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390890   ⟸   XM_038534962
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LDQ2 (UniProtKB/TrEMBL),   A0A8C0MH98 (UniProtKB/TrEMBL),   A0A8C0R6U5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390892   ⟸   XM_038534964
- Peptide Label: isoform X4
- UniProtKB: A0A8C0LDQ2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038390893   ⟸   XM_038534965
- Peptide Label: isoform X5
- UniProtKB: A0A8C0LDQ2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845007144   ⟸   ENSCAFT00845009059
Protein Domains
Ionotropic glutamate receptor C-terminal   Ionotropic glutamate receptor L-glutamate and


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000017765 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030007058 UniProtKB/TrEMBL
  ENSCAFG00040006918 UniProtKB/TrEMBL
  ENSCAFG00845005055 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000073933.2 UniProtKB/TrEMBL
  ENSCAFT00030013469.1 UniProtKB/TrEMBL
  ENSCAFT00030013648.1 UniProtKB/TrEMBL
  ENSCAFT00030013777.1 UniProtKB/TrEMBL
  ENSCAFT00040013110.1 UniProtKB/TrEMBL
  ENSCAFT00040013158.1 UniProtKB/TrEMBL
  ENSCAFT00040013225.1 UniProtKB/TrEMBL
  ENSCAFT00845009059 ENTREZGENE
  ENSCAFT00845009059.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.287.70 UniProtKB/TrEMBL
  3.40.50.2300 UniProtKB/TrEMBL
  Periplasmic binding protein-like II UniProtKB/TrEMBL
InterPro ANF_lig-bd_rcpt UniProtKB/TrEMBL
  Glu/Gly-bd UniProtKB/TrEMBL
  Iono_rcpt_met UniProtKB/TrEMBL
  Ionotropic_Glu_rcpt UniProtKB/TrEMBL
  Iontro_rcpt UniProtKB/TrEMBL
  Peripla_BP_I UniProtKB/TrEMBL
NCBI Gene GRIA1 ENTREZGENE
PANTHER GLUTAMATE RECEPTOR 1 UniProtKB/TrEMBL
  IONOTROPIC GLUTAMATE RECEPTOR UniProtKB/TrEMBL
Pfam ANF_receptor UniProtKB/TrEMBL
  Lig_chan UniProtKB/TrEMBL
  Lig_chan-Glu_bd UniProtKB/TrEMBL
PRINTS NMDARECEPTOR UniProtKB/TrEMBL
SMART Lig_chan-Glu_bd UniProtKB/TrEMBL
  PBPe UniProtKB/TrEMBL
Superfamily-SCOP Periplasmic binding protein-like II UniProtKB/TrEMBL
  SSF53822 UniProtKB/TrEMBL
  Voltage-gated potassium channels UniProtKB/TrEMBL
UniProt A0A8C0LDQ2 ENTREZGENE
  A0A8C0LIJ6 ENTREZGENE
  A0A8C0MH98 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0MHS5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0QCV0_CANLF UniProtKB/TrEMBL
  A0A8C0R6U5 ENTREZGENE
  A0A8I3MYK4 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:41480 ENTREZGENE