ZFAND1 (zinc finger AN1-type containing 1)

Gene: ZFAND1 (zinc finger AN1-type containing 1) Canis lupus familiaris

Analyze

Symbol:

ZFAND1

Name:

zinc finger AN1-type containing 1

RGD ID:

12129412

Description:

ENCODES a protein that exhibits metal ion binding (inferred); proteasome binding (inferred); zinc ion binding (inferred); INVOLVED IN cellular response to heat (ortholog); cellular response to osmotic stress (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (inferred); cytoplasmic stress granule (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

AN1-type zinc finger protein 1

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	29	28,799,635 - 28,825,494 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	29	28,808,423 - 28,825,748 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	29	29,086,361 - 29,106,418 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	29	28,939,673 - 28,959,401 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	29	28,938,544 - 28,959,664 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	29	29,008,849 - 29,028,893 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	29	29,022,792 - 29,042,770 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	29	29,379,575 - 29,399,635 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to arsenite ion (IEA)

cellular response to heat (ISO)

cellular response to osmotic stress (ISO)

cellular response to oxidative stress (ISO)

positive regulation of intracellular protein transport (IEA)

stress granule disassembly (IEA)

Cellular Component

cytoplasm (IEA)

cytoplasmic stress granule (IEA)

Molecular Function

metal ion binding (IEA)

proteasome binding (IEA)

protein binding (ISO)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

ZFAND1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	29	28,799,635 - 28,825,494 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	29	28,808,423 - 28,825,748 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	29	29,086,361 - 29,106,418 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	29	28,939,673 - 28,959,401 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	29	28,938,544 - 28,959,664 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	29	29,008,849 - 29,028,893 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	29	29,022,792 - 29,042,770 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	29	29,379,575 - 29,399,635 (-)	NCBI		UU_Cfam_GSD_1.0

ZFAND1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	81,701,331 - 81,721,304 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	81,701,334 - 81,732,903 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	82,613,566 - 82,633,539 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	82,776,513 - 82,796,085 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	8	78,618,071 - 78,638,022 (-)	NCBI		Celera
Cytogenetic Map	8	q21.13	NCBI
HuRef	8	78,103,461 - 78,123,472 (-)	NCBI		HuRef
CHM1_1	8	82,665,188 - 82,685,124 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	82,133,043 - 82,153,000 (-)	NCBI		T2T-CHM13v2.0

Zfand1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	10,405,013 - 10,416,383 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	10,405,013 - 10,416,377 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	10,339,956 - 10,351,334 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	10,339,953 - 10,351,317 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	10,339,956 - 10,351,301 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	10,322,488 - 10,333,833 (-)	NCBI		MGSCv36	mm8
Celera	3	10,373,905 - 10,385,278 (-)	NCBI		Celera
Cytogenetic Map	3	A1	NCBI
cM Map	3	2.62	NCBI

Zfand1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	93,351,918 - 93,364,959 (+)	NCBI		GRCr8
mRatBN7.2	2	91,444,497 - 91,457,540 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	91,444,508 - 91,453,246 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	97,934,976 - 97,948,037 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	96,055,962 - 96,069,025 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	91,112,820 - 91,125,877 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	93,656,895 - 93,666,745 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	93,656,946 - 93,665,939 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	113,412,414 - 113,422,261 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	93,397,689 - 93,407,496 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	93,339,924 - 93,351,656 (+)	NCBI
Celera	2	87,047,539 - 87,057,384 (+)	NCBI		Celera
Cytogenetic Map	2	q23	NCBI

Zfand1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955417	49,477 - 88,677 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955417	51,721 - 88,488 (-)	NCBI	ChiLan1.0	ChiLan1.0

ZFAND1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	97,438,463 - 97,462,514 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	73,067,820 - 73,091,865 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	78,224,428 - 78,248,625 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	79,844,701 - 79,868,716 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	79,837,970 - 79,868,716 (-)	Ensembl	panpan1.1		panPan2

Zfand1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	50,381,231 - 50,397,876 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936656	2,571,713 - 2,589,734 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936656	2,571,757 - 2,588,385 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ZFAND1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	54,908,885 - 54,934,491 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	54,908,881 - 54,930,826 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

ZFAND1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	77,113,183 - 77,132,408 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	8	77,112,846 - 77,132,401 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666039	64,062,813 - 64,082,404 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Zfand1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624744	9,782,515 - 9,792,877 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624744	9,769,680 - 9,807,392 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ZFAND1
506 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			1				4				1
Low	5	3	21	6	6	6	2	6	10	4	9	6
Below cutoff		2							2	4

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038441476	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038516047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038579612	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038643858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_544147	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002621136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000306	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000073	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000013494 ⟹ ENSCAFP00000012486

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	29	28,808,423 - 28,825,748 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000062165 ⟹ ENSCAFP00000056631

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	29	28,808,423 - 28,825,748 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000075945 ⟹ ENSCAFP00000063956

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	29	28,808,673 - 28,825,449 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000081562 ⟹ ENSCAFP00000064552

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	29	28,808,423 - 28,825,748 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845027204 ⟹ ENSCAFP00845021400

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	29	28,938,544 - 28,959,664 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845027231 ⟹ ENSCAFP00845021423

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	29	28,938,544 - 28,959,664 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845027260 ⟹ ENSCAFP00845021449

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	29	28,940,878 - 28,959,371 (-)	Ensembl

RefSeq Acc Id:

XM_038441476 ⟹ XP_038297404

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	29	28,939,673 - 28,959,401 (-)	NCBI

RefSeq Acc Id:

XM_038516047 ⟹ XP_038371975

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	29	29,008,849 - 29,028,893 (-)	NCBI

RefSeq Acc Id:

XM_038579612 ⟹ XP_038435540

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	29	29,379,575 - 29,399,635 (-)	NCBI

RefSeq Acc Id:

XM_038643858 ⟹ XP_038499786

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	29	29,022,792 - 29,042,770 (-)	NCBI

RefSeq Acc Id:

XM_544147 ⟹ XP_544147

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	29	28,807,468 - 28,825,494 (-)	NCBI
Dog10K_Boxer_Tasha	29	29,086,361 - 29,106,418 (-)	NCBI

Sequence:

show sequence

CCCAGCAGGCGCCGCGCGTGCGCCGCAGCCCCGCCCCTTGCGGCGCGGAGTGATGGCGGAGCTG
GACGTGGGGCGGCACTGCCAGGTGGAGCGCTGCCGGCGGCGAGATTTTCTTCCATTTGTGTGCG
ATGGTTGTTCAGGAGTATTTTGCCTTGAACACAGAAGCAGAGAGTCACATAGCTGCCCTGAGGT
GACTGTAATCCATGAGAGACTGAAGTCAGATAAGCCTACATCTTACCCATGCTCATTCAAGGAC
TGTGCGGAAAAAGAGCTAGTGCCAGTTACATGTCCTTATTGTGAGAAGAATTTTTGCCTGAGGC
ACCGTCATCAATCAGATCATGAATGTGAAAAACTGGAAATTCCTAGGCCTCGTATGGTTGCCAC
TCAGAAACTTGTTAAAGACATTATTGATTCTAAGACTGGAGAGACGGCAAGTAAACGAAGGAAA
GGTGCAAAAAATAGTGAAACAGCTGCAAAGGTAGCGTTGATGAAATTAAAGATGCGTGCTGACG
GAGATAAGTCATTGCCACAGACAGAAAGAGTTTACTTTCAGGTTTTCTTACCTAAGGGGAGCAA
AGAGAAGAGCAAACCAATGTTCTTTTGCCACCGATGGAGCATTGGAAAGGTCATAGACTTTGCA
GCTTCTTTAACCAGTCTTAAAAATGACAATAACAAATTAACAGCTAAGAAGTTAAGGTTATGTC
ACATTACTTCAGGAGAAGCCTTACCCTTGGATCATACTTTGGAAACCTGGATTGCTAAGGAGGA
TTGCCCTTTATATAATGGTGGAAATATTATCTTGGAATATCTTAATGATGAAGAACAATTTTTA
AAAAATGTTGATTCTTACTTGGAATAGTCATGTAAGGACTCAAGCTGGAGATGACAAGGAAAAT
TCTATGTTAAGTCAATTTCCTTTACTACAAATACAATATATTTTATTTTTAAAAGTTGCTTTCT
AACTTATTTCCATTATGTCATAATTTACATTATCAGTTTTCTCTTAAATTGAATTCAAATTTTT
GTGTGTTAAAGTTTAACTATGAATGGACATTGAATTATCAGCAAATTCATGTCTTTAGCTTTTA
TTAGGTTCTGCTTAGTAACAACAAAAAAGGTGTATTTCATTTAGTTAATGTCAGTTGTCATGAC
TTTCTGCTGCATACCATCTTTACTCTAGGATCAAAGCTGAAGGAATGACTCCTGTTTGGAGTCA
TTGCTACTTTTAAGGCAATGGAAGAGAAGAGATGGCTTTAAGAAAACACACATGTAACTTTTGC
TTTAAGTAAGTAATATGGCCAAGCCTGGCATCATGAGGCCAGGATATATGGCCTTAACTGTATA
TCCAGATGTATACATTGATGTGTGTACATGAATCATAGAAACTTAGAGACCATCTCATTCACTC
TTCTAAGTTTTTAGATGAGGAATCTCAGGCCTAGGAAGAAGAAACAGTTGTCTTGGTGTCATCT
AACTGCTTTGGGGCATATCTCTGATAAAGGTCCTCCTCTAGTAGGATTTACCTTTTTTTTTTTC
TTTTTTTGTATAGATGTATTACAAATGAGAGTAAGATGAAGTCACACAACTTCATTACAGTATC
TTTATATATATATCAAAGCAAAATATATACCAAAAGGAACTATATTTTACCAACACATTAAAAT
TATTGCTTCTGATTGATATATTCCATCAGTACTCAACAAAGTACTACTATATAGAAGGAAGAGA
AATGGTTTATTTTCCCTTTTTGTTGTTGGGGAAGGCTTTGTCCCTTTTCTATCTTAATTGTCAA
GGTCCCATATAGTGACTTTATGTATAATTAAATAAAGGAATTAAGCTCAGAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038297404	(Get FASTA)	NCBI Sequence Viewer
	XP_038371975	(Get FASTA)	NCBI Sequence Viewer
	XP_038435540	(Get FASTA)	NCBI Sequence Viewer
	XP_038499786	(Get FASTA)	NCBI Sequence Viewer
	XP_544147	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000012486.5
	ENSCAFP00000056631.2
	ENSCAFP00000063956.1
	ENSCAFP00000064552.2
	ENSCAFP00000072650.1
	ENSCAFP00040032324.1
	ENSCAFP00040032434.1
	ENSCAFP00845021400.1
	ENSCAFP00845021423.1
	ENSCAFP00845021449.1

RefSeq Acc Id:

XP_544147 ⟸ XM_544147

- UniProtKB:

A0A8C0R4P4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAELDVGRHCQVERCRRRDFLPFVCDGCSGVFCLEHRSRESHSCPEVTVIHERLKSDKPTSYPC
SFKDCAEKELVPVTCPYCEKNFCLRHRHQSDHECEKLEIPRPRMVATQKLVKDIIDSKTGETAS
KRRKGAKNSETAAKVALMKLKMRADGDKSLPQTERVYFQVFLPKGSKEKSKPMFFCHRWSIGKV
IDFAASLTSLKNDNNKLTAKKLRLCHITSGEALPLDHTLETWIAKEDCPLYNGGNIILEYLNDE
EQFLKNVDSYLE

hide sequence

RefSeq Acc Id:

ENSCAFP00000056631 ⟸ ENSCAFT00000062165

RefSeq Acc Id:

ENSCAFP00000012486 ⟸ ENSCAFT00000013494

RefSeq Acc Id:

ENSCAFP00000063956 ⟸ ENSCAFT00000075945

RefSeq Acc Id:

ENSCAFP00000064552 ⟸ ENSCAFT00000081562

RefSeq Acc Id:

XP_038371975 ⟸ XM_038516047

RefSeq Acc Id:

XP_038499786 ⟸ XM_038643858

RefSeq Acc Id:

XP_038297404 ⟸ XM_038441476

RefSeq Acc Id:	XP_038435540 ⟸ XM_038579612
- UniProtKB:	A0A8C0R4P4 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845021400 ⟸ ENSCAFT00845027204

RefSeq Acc Id:

ENSCAFP00845021423 ⟸ ENSCAFT00845027231

RefSeq Acc Id:

ENSCAFP00845021449 ⟸ ENSCAFT00845027260

Protein Domains

AN1-type

Promoters

RGD ID:

13688438

Promoter ID:

EPDNEW_C6508

Type:

multiple initiation site

Name:

ZFAND1_1

Description:

zinc finger AN1-type containing 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	29	28,825,455 - 28,825,515	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000008505	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00040019915	UniProtKB/TrEMBL
	ENSCAFG00845015224	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000013494.5	UniProtKB/TrEMBL
	ENSCAFT00000062165.2	UniProtKB/TrEMBL
	ENSCAFT00000075945.2	UniProtKB/TrEMBL
	ENSCAFT00000081562.2	UniProtKB/TrEMBL
	ENSCAFT00000093984.1	UniProtKB/TrEMBL
	ENSCAFT00040037105.1	UniProtKB/TrEMBL
	ENSCAFT00040037226.1	UniProtKB/TrEMBL
	ENSCAFT00845027204.1	UniProtKB/TrEMBL
	ENSCAFT00845027231.1	UniProtKB/TrEMBL
	ENSCAFT00845027260.1	UniProtKB/TrEMBL
Gene3D-CATH	4.10.1110.10	UniProtKB/TrEMBL
InterPro	AN1-like_Znf	UniProtKB/TrEMBL
	Znf_AN1	UniProtKB/TrEMBL
NCBI Gene	ZFAND1	ENTREZGENE
PANTHER	AN1-TYPE ZINC FINGER PROTEIN 1	UniProtKB/TrEMBL
	ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED	UniProtKB/TrEMBL
Pfam	zf-AN1	UniProtKB/TrEMBL
PROSITE	ZF_AN1	UniProtKB/TrEMBL
SMART	ZnF_AN1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF118310	UniProtKB/TrEMBL
UniProt	A0A8C0R4P4	ENTREZGENE
	A0A8C0T8W2_CANLF	UniProtKB/TrEMBL
	A0A8C0T964_CANLF	UniProtKB/TrEMBL
	A0A8I3NKN8_CANLF	UniProtKB/TrEMBL
	A0A8I3NW92_CANLF	UniProtKB/TrEMBL
	A0A8I3P0N5_CANLF	UniProtKB/TrEMBL
	A0A8P0PDA1_CANLF	UniProtKB/TrEMBL
	A0A8P0SDR5_CANLF	UniProtKB/TrEMBL
	A0A8P0T8T7_CANLF	UniProtKB/TrEMBL
UniProt Secondary	A0A8P0PCM8	UniProtKB/TrEMBL
	A0A8P0TRG9	UniProtKB/TrEMBL
VGNC ID	VGNC:48599	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar