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Gene: GABRG1 (gamma-aminobutyric acid type A receptor subunit gamma1) Canis lupus familiaris

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Symbol:

GABRG1

Name:

gamma-aminobutyric acid type A receptor subunit gamma1

RGD ID:

12126122

Description:

ENCODES a protein that exhibits GABA receptor binding (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN chemical synaptic transmission (inferred); chloride transmembrane transport (inferred); chloride transport (inferred); ASSOCIATED WITH prostate cancer (ortholog); trigeminal neuralgia (ortholog); FOUND IN receptor complex (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

gamma-aminobutyric acid (GABA) A receptor, gamma 1; gamma-aminobutyric acid receptor subunit gamma-1; gamma-aminobutyric acid type A receptor gamma1 subunit

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	42,194,929 - 42,276,379 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	42,200,202 - 42,276,711 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	42,147,102 - 42,226,119 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	42,802,382 - 42,881,664 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	42,802,403 - 42,881,644 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	42,478,701 - 42,559,787 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	42,542,428 - 42,621,417 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	42,891,593 - 42,972,762 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

prostate cancer (ISO)

trigeminal neuralgia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chemical synaptic transmission (IEA)

chloride transmembrane transport (IBA,IEA)

chloride transport (IEA)

gamma-aminobutyric acid signaling pathway (IBA,IEA)

inhibitory synapse assembly (IBA)

monoatomic ion transmembrane transport (IEA)

monoatomic ion transport (IEA)

synaptic transmission, GABAergic (IBA)

Cellular Component

chloride channel complex (IEA)

dendrite membrane (IBA)

GABA-A receptor complex (IBA)

membrane (IEA)

plasma membrane (IEA)

postsynapse (IBA)

postsynaptic membrane (IEA)

receptor complex (ISO)

synapse (IEA)

Molecular Function

benzodiazepine receptor activity (IBA)

chloride channel activity (IBA,IEA)

extracellular ligand-gated monoatomic ion channel activity (IEA)

GABA receptor binding (ISO)

GABA-A receptor activity (IBA,IEA,ISO)

GABA-gated chloride ion channel activity (IBA)

monoatomic ion channel activity (IEA)

protein binding (ISO)

transmembrane signaling receptor activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

GABRG1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	13	42,194,929 - 42,276,379 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	13	42,200,202 - 42,276,711 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	13	42,147,102 - 42,226,119 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	13	42,802,382 - 42,881,664 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	13	42,802,403 - 42,881,644 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	13	42,478,701 - 42,559,787 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	13	42,542,428 - 42,621,417 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	13	42,891,593 - 42,972,762 (-)	NCBI		UU_Cfam_GSD_1.0

GABRG1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	4	46,035,769 - 46,124,054 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	4	46,035,769 - 46,124,054 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	4	46,037,786 - 46,126,071 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	4	45,732,543 - 45,820,839 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	4	45,878,716 - 45,967,010	NCBI
Celera	4	46,488,013 - 46,574,168 (-)	NCBI		Celera
Cytogenetic Map	4	p12	NCBI
HuRef	4	45,360,145 - 45,446,265 (-)	NCBI		HuRef
CHM1_1	4	46,036,916 - 46,125,198 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	4	46,004,706 - 46,090,897 (-)	NCBI		T2T-CHM13v2.0

Gabrg1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	70,906,512 - 70,999,960 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	70,908,390 - 70,999,960 (-)	Ensembl		GRCm39 Ensembl
GRCm38	5	70,751,047 - 70,842,617 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	70,751,047 - 70,842,617 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	71,142,286 - 71,233,856 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	71,030,182 - 71,121,752 (-)	NCBI		MGSCv36	mm8
Celera	5	68,018,391 - 68,111,259 (-)	NCBI		Celera
Cytogenetic Map	5	C3.1	NCBI
cM Map	5	37.43	NCBI

Gabrg1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	14	37,750,292 - 37,821,651 (+)	NCBI		GRCr8
mRatBN7.2	14	37,396,217 - 37,469,606 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	14	37,396,294 - 37,635,956 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	14	37,753,276 - 37,828,496 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	14	39,058,046 - 39,133,276 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	14	37,538,976 - 37,614,195 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	14	39,964,502 - 40,051,306 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	14	39,964,588 - 40,049,354 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	14	39,777,443 - 39,860,718 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	14	39,878,182 - 39,951,391 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	14	39,880,572 - 39,953,782 (+)	NCBI
Celera	14	36,610,452 - 36,681,348 (+)	NCBI		Celera
Cytogenetic Map	14	p11	NCBI

Gabrg1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955443	2,276,555 - 2,347,983 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955443	2,276,592 - 2,353,312 (+)	NCBI	ChiLan1.0	ChiLan1.0

GABRG1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	3	81,746,482 - 81,833,268 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	4	82,010,545 - 82,097,452 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	4	76,034,539 - 76,121,797 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	4	86,762,932 - 86,850,033 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	4	86,762,417 - 86,850,033 (+)	Ensembl	panpan1.1		panPan2

Gabrg1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405285	33,824,202 - 33,908,100 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936482	12,392,248 - 12,474,056 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936482	12,390,328 - 12,473,904 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GABRG1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	8	36,198,060 - 36,262,430 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	8	36,198,056 - 36,262,492 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	8	38,019,051 - 38,061,900 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GABRG1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	27	4,133,320 - 4,224,366 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	27	4,133,161 - 4,219,122 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	50,208,763 - 50,323,326 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gabrg1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624761	20,964,276 - 21,040,418 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624761	20,964,359 - 21,045,151 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in GABRG1
1024 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
4	5	2	23	21	15	6	5	6	6	29	18	12	14	9

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003639456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022426953	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038429124	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038493671	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038493672	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038493673	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555986	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555987	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038555988	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038619937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038619938	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038619939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038685530	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038685531	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038685532	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000142	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000361	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000002978 ⟹ ENSCAFP00000002762

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	13	42,200,202 - 42,276,711 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000078990 ⟹ ENSCAFP00000045447

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	13	42,200,202 - 42,268,327 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845027865 ⟹ ENSCAFP00845021933

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	13	42,802,403 - 42,881,644 (-)	Ensembl

RefSeq Acc Id:

XM_003639456 ⟹ XP_003639504

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	13	42,194,929 - 42,276,379 (-)	NCBI
Dog10K_Boxer_Tasha	13	42,147,102 - 42,226,119 (-)	NCBI

Sequence:

show sequence

ACCCCGCGGGCTGACTGGCGGGCACCTGGCCGGGGCCCCTCCCGCCGCCGCTGCTCCCGCGGCT
GCCCAGGTGCGAGGCGGGTCGGCGGAGAACCCGGCGGACGATGCCCCCGATGGGTCCCTGGAAA
GCTCCCCTCTGCTCCCCTTTCCTCCTGGGGAGTCAGAGTAGAGTCGTGAGGCTGCTCTTCTTGC
TCCTGACCCTGCATCTGGGCAACTGTGTTGATAAAGTGGATGACGAAGATGATGAGGATTTAAC
AGTGAACAAAACTTGGGTCTTGGCACCAAAGATTCATGAAGGAGATATAACACAAATTCTCAAC
TCTTTGCTTCAAGGCTATGACAACAAACTTCGCCCAGATATAGGAGTGAGGCCCACGGTAATTG
AAACTGATGTTTACGTAAACAGCATTGGACCAGTTGATCCCATAAATATGGAATACACAATAGA
TATAATTTTTGCCCAAACCTGGTTTGACAGTCGTTTAAAATTCAACAGTACCATGAAAGTGCTT
ATGCTTAACAGTAATATGGTAGGAAAAATTTGGATTCCTGACACTTTCTTCCGAAACTCAAGAA
AATCTGATGCACATTGGATAACAACTCCTAACCGTCTGCTTCGAATTTGGAATGATGGACGAGT
TCTATATACTCTAAGATTGACAATTAATGCGGAATGTTATCTTCAGCTTCATAACTTTCCTATG
GATGAACATTCCTGTCCACTGGAATTTTCAAGCTATGGGTACCCTAAAAATGAAATTGAGTATA
AGTGGAAAAAACCTTCTGTTGAAGTGGCTGATCCTAAATACTGGAGATTATATCAGTTTGCATT
TGTAGGGTTACGGAACTCGACTGAAATTTCTCACACAATCTCTGGAGATTATATTATCATGACA
ATTTTTTTTGACCTGAGCAGACGAATGGGATATTTCACTATTCAAACCTACATCCCATGTATTT
TGACAGTTGTACTTTCTTGGGTGTCTTTTTGGATCAATAAAGATGCTGTACCTGCAAGAACATC
ACTTGGTATCACTACAGTTCTGACCATGACCACCCTGAGCACAATCGCCAGGAAGTCATTACCT
AAGGTCTCCTACGTGACTGCGATGGATCTCTTTGTGTCCGTCTGTTTCATTTTTGTCTTTGCAG
CCTTGATGGAATATGGCACCTTGCATTACTTTACCAGCAACAAAAAGGGAAAGACCACTAGAAA
CAGAAAGCTAAAGAATAAAAGCTCGATGTCCCCTGGACTCCATCCTGGATCCACTCTGATTCCA
ATGAATAGCATTTCTCTGCCACATGGAGAAGAGGATTATGGGTATCAGTGTTTGGAGGGCAAGG
ATTGCGCCAGCTTCTTCTGTTGCTTTGAAGACTGCAGAACAGGATCATGGAGGGAAGGGAGGAT
ACACATCCGCATTGCTAAAATTGACTCCTATTCTCGAATATTTTTCCCAACAGCTTTTGCCCTG
TTCAATCTGGTGTATTGGGTTGGCTATCTTTACTTGTAAGTTCTATGTGCCAGGCCAAAATTGT
AAGAAGTTTAACTAAATCCAATATAATCTCTTGCACTTCAGTAACGTGAAGTTTAAATTCAAAA
TGCAGAGAAACCACTGGTTAAAATGTAAAACCACTGTAACTGTTCTATGGCTTCATAGGTAAAT
AAAGCAGCAGCTTTCATGTTAATTTACTTACATGTATGTCAAAGGGATTAGTTGCAAAATTCAA
TAGAGTAAAATAGTACATATATTTTTACTTGAATCTTATTTATTTTACTAGTATCCTTGAGATT
TTGAATTCATAAGTTCCGTGGTTCATATTTGAAAGATGGAATACTTTAATGACTTTAATAATAT
TTTATTTAGATATAATATCACTGTTTGTAATGGTAGCCTAATCTCATGCCTAATGTTTATGTAG
TAAGTTTTTGCTTAGAAAATATAATTATTTTGATTTTTTTTCTTACACTTTATCTGTATGCTCT
GTTTGGAGTAGAGCTAGTTAAAACCATGAAGCCATGATTTCCTGGCATTTATATCCAGATGCAT
TCACTCTCAAGAACAAATTAAATTAGAAGAAAATGCCAATTTTCACCTTATTAAAAGGCCAGTT
TTTATCTGTATTTGAATCAACACTATTTCCTGACACCAATATTAAATAGAGCTGTAGTTACATT
TAGTTTTGACAGTTTACAAACTCGGATGGAAGCCACCATAGTCATTTCTTTTAAATTCAAGGTG
AAAAAATAAAGTTACATTTAACCATTTTATTCTCTGCCTCACAGCATTTATGAAGTATGAAGAA
GTTCACACTGAAATGTTTAGATCTACTAACACTGAAATTAAATACAGAAAGAATTGATTTTTTA
TGTTCTACAAAAGTATTACGTTCCCTAAATTTTCAAAAACATTGAAGAACAACAGTGCTCGTAT
TTACTCATTGTGGATAAAGAATTATCTAGCAAATTGAGTAACAGATCATATTAGGGATACAGTC
TTAAATATGTACTACCAATAATTGCCAGACTAAAAATATCCTAGAAATATAGTTTTAGGCGCGT
GTCATATATTATCTTTTCTGGCTCCTACATTTGGACTCTTGTCAGATTTACATCTTTGTTATAA
ATTGTTATGATGTTCTCTATTACAAAAAATGAGAGCAGGCTCAAAAATCATGTTAAAAGTGGAA
TTCTGTTAGAGGCACCTCTAAGGAACATGATTGCTGGAGCCTTCTAAAGTCTTAGAGATAGGAG
CAGAGAAAGCCTCACTGTAGTATAAGGCCTGCTGGTTAACAGTTTCCCAAATGCTTCTTTTGTT
AAGAGTAGAGTTAACTCCAGGCTTTAATCACTACATTCCTGTAAATAGTTTGGCATCTCCATTG
TTTATAAGAACTCCACATTCATTCACTACCACCTAATTTTTTTGGAAGATCCCCAAAGTGATCT
TGGAGATAACCTTTAAAAACTGTTTTCATTGCCAGAGCAAGTATGAGGATACAGAGTTTTGTGA
TCAAAGCTTATATCCTATGGCATGTGGAAGGAGCTAGCACCTGCGCATTTGACACTAGTTTTTA
ACACAGTAATTCCCCCACATGGTTAGTGAATATATGAGTGGGGCTCTGGCATGGTTATAGTTAC
TGTTTTAGAATATATAGGGTTTTTTTTAATCTAAGTACATTTCATTGTGTATTCCTCAGCTAAA
TCAGAATTTTTTTTAATTTTGATTCTAAACCTCTGAAAAAAATGTAAGCATGAATTAAGTGATA
ATGCCCAAATATCCACCGACACTACCTTTTTTGAATGGAGAGCCAAATTAAACTTTGGCCGTGT
ATATATTCACTTACAAATTATTCATGCATTCACTTTTTATAGCTGAGTTACTGATGGATATTCT
TAATGTGAACACTCATTTATGGGTAAATGGAAAATGAAGTTTCATGAAGAATAAACACCACTAA
AATGTGTTATGGCTATTTCCATGTTCTAAGCTATAACCTGTCAATTTCATGAAGGCAATTTAAA
TTCTGGGATTCTTCAACTTTATCAGAGCATGACTGTATTTTAAAATACTTTAAAATGCTTAATA
TAAATAGCTTTGATTTTTCTCGTTGGTGTTCCATTAACTTGGCTTTAAATGTTGGCAATATTAA
CAAGTGGAAATAAAATTAATAAAAATATGAAAGACACTTTACTATATACACTCATTGTATAGAT
CATGGAAACAAGCACTTTGTTTTCAAAGCCAGTGGCATTTTGAGCAGTTTTGTTTAAATATGTA
GCAAAAGAGAGGTGTACAAATCATAATATTTCTAAAAATGAGAACAAACAGGTAAAGATGCAGT
TAGATTCTGTTTACAAGAAATCAAGTCAAACTTATTTTCGGGAAATGCAGTCTAATTCCTGACC
CCTTCTTCTTTCAAGAAGTTTTACCATCTTTAGAAACAATTTTCTGAGAAATCCTCCTCTTCTT
GCAGAGTTACGTCTGAATTTATTGGGGTCACTGGAATTTGCACTTCCTAGCTGCTTTAAATGAT
TTTAACACTAACATAGATCAAAGAAGTGGATAGAGGATAGAAAGCATAAATGGAGCAGAAGGAT
TTAGAATAATTTGGAAAACGTTAATTTATATAAACCCACTCTCTGAATATGTGAAAGTTCTGAC
AAGGAAAATTGTGATTAGTACAATCTTATTCTCTTGAATTTACAATTGCATGATAATATTTTAT
TCTTGAATTGCATAGGAAAACTTACACTCACTTGAAATTAATTCCTGAAATGCCAAGTAGTTTC
TGGGGGGGAAAAAAAAACAGGAGGGAAGAAAGAGGGAAGAAAGAAAGAAAGAAAAGAACTTAGA
CTCCCTGAGAATTTGGTAAGGAAAGGGCAAAATTTGTCAGTAAATCTAAAGTTTTAATGTAAAT
AGAAATCAGACAATTTATTTAATTTTTTTAAAGTTAAAGACATAGATTTCATTAAGGAGTTGTC
ATAACGGATCATCTATAAGTCAAAACACAGTAAATGTGTGTAATAATATAGACAATCACCAGGT
TGTTTTTTCCTTTAGCATATTCCCATATCTGACATCAATATACAGTCATAGAATATGCTAGTTT
TGCTTAAATAGCAAGGCCAATATTGAGGGCTGCATGCTTGCCAATGATTGAGCATCAAAAAGAA
TGATTTATAGTAGTCTCACATCAAGGGACCATAATTGTAAAATGTGAAATTGTATTCCAAGTTA
ATATGCTGTAACAAAATGCATCTTATACTTTGTTTACACAAGAGGAGATTTAGATAGGATCACT
TGCTCAAGTAAAATTTAGGTTAATAACCAATAAGTGAATAAGCACCTAATAAATGAATAAGTAC
ATATGTAGGATTATCAAACTTCTATACCAGGGCCCATTTTCACTTGCAAAATTTCCTGTAGCAA
GATACCAGATTCTCAATTATTTTTATTGATCTTACTTAGCACTGGAATTGAAGTGATTCAATGG
AAGATTTAATGACTTAACATTTGTCCCACCACAAACATTTTTGAAAATCAGCTACTTTTCTTTA
CACCATCAAATTCACTTTACTTCTCAGTGTCTTTTCATATGAAGTCCAGACGTACTTGGTCTCA
TGTTTCTGTTGGTTATCATTGTTTTTCACTGTTACAAATCCCTTGACATGCCACTGTAAAGTCA
TAGAAGCCATTACCAAATCATTGTCAAAAACATTCCAGATAGGGACGCCTGGGTGGCACAGTCA
GTTAAGCAACCTACTCTTGGTTTCAGCACAGGTTGGGACCTTGGAGTCATGTGATCAAGCCCTG
CATGGGCATTCATGCTCAGGGTGGAGTCTGCTTGGAATTCTCTCTGTCTCCCTCTGCTTCTCTC
TAAAAGTGGATAAAGAAATCTTAAAAAATAAAAGATTTCAAATGGAGTCTCCAAACACTATCAA
CCATACTGCTCTAGGAAAGATAAGGTCAGTTCCGCCTTTTTTGTCTTTGCATTTTGGAAGTGAC
ATCTAGTGCAAAATATTCATGCAGCACTTTCCATAGATAAGATACAAGAGGGAATATACAAAGA
TGAACTCTCAAGAAACGATAGCCTGAGCATCAGTTATACAATTTAAGGGAGGGAGGATAACTCT
GGCAAAGGTTCTACAGCTGGGATCTCGAGAATTCAGTATATGCCGCTACGTGAGGTTAACTAGG
GATCATACTTCCGGTTGAGTAAACAGCTTGCATGAAGAAACAGAAGCATGGGCACAAATAAAAG
TTCCATTTTATTTGAAAATTGAGATGCATATAGAGATAATTAAAGATGAGACAAAGATAGGTCC
AGTCCTGTGGCAAAGAGGCAAGAATACAAACCTCAGGGGACTGGGTGATACTCTAAATCCATGG
AGAGTTCAAAAAGATACTTAAGTAGAAAAGAGCCATTATTGATACTGTGGAAATTTCCTTGTAT
TGGTGTGTGCTGTTCAGAGTAAGAAAAGCCAAAGCCTGTTAGGAAGCAACTGTACAACAGGAGG
TGAGGGAGGAGGAAGGTTAAAGTGCAGTGATAGTTGAGTGGGGGAGAGCGAGAGCCAGCCACCT
GAACTAGAAGGGAAAATGGAGATGAAGCTGAGATGGACAGACAGCATTAACTGAGTGATATGGT
TGGTGTGCGCGGGGCACCAGGGCTCCTGTACTGAATGGTACAGACGTGTGTACAAATAGACTCT
AACCCAGTGTAAAGAAGTTGATGCATTACAGCCTGGCTTGCTGTTACTCTGAACATTTTAATCA
AATGCTTATTTTTTTTATGTTGATCTGTGTTTCTCCCACATTAGGGATGAGGGCAGGAATAATC
TCCTGAAATACAAATCATAAAGGATTCTGTCTAGTTTATTAGTATTATTAATATTATTATTATT
TAAATCTATTTCCCATTGTAAGGGTTTTCTCTTCAAATACTTCTCTTTCTTTCTGAGGGAAAAA
CATGTATTTGAACAAAGAAAGGAGGTAAACTGGCAATAGAAAGAGGCTGAGATGGGACGAGATA
AATCCAAGGATTTGTATTCTCACTTTCTGAAATACTTGTCTCAAAATAAATACGTAGATTTTTA
TTGTTGTGCAATGAAATGTACGTGGGCCGTGAATAGTTGGACTCTGTGAATGGATAAGATAAGC
CCGTGATAACTGTAATGCAATTGAGCACAAAGGAGTAAATAACAGACTTTAAAGACATGGCTGA
CCTAAATGGAAATAGTTTGGGTCTCGATAAATCACTGTAATAACAGCTATTTGCATCCATTAAG
TGTATCTGGTCATGTCGTATAATCAAGTTTCATGGCTTGTGATTGTGACGACGTCTGATGTCTG
CTTCTGCCTTATTTTGGAGAGCATTTTGTGAGCCTGTGGCAAAAGTATTCAGCTTTTCAAAGTG
TTCTGTACTTTCATGATTCTGAGTGCAAAATAAAGTCAGTAACTTGTCATGAAAAAA

hide sequence

RefSeq Acc Id:

XM_022426953 ⟹ XP_022282661

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	13	42,194,929 - 42,276,299 (-)	NCBI
Dog10K_Boxer_Tasha	13	42,147,102 - 42,226,038 (-)	NCBI

Sequence:

show sequence

GGTCGGCGGAGAACCCGGCGGACGATGCCCCCGATGGGTCCCTGGAAAGCTCCCCTCTGCTCCC
CTTTCCTCCTGGGGAGTCAGAGTAGAGTCGTGAGGCTGCTCTTCTTGCTCCTGACCCTGCATCT
GGGCAACTGAGGGAAGCCTGTCTCTGAAACATATGGAAATAACTGATGTACTTTTGGATTTGCC
TGATTTCACCAACTGTTGATAAAGTGGATGACGAAGATGATGAGGATTTAACAGTGAACAAAAC
TTGGGTCTTGGCACCAAAGATTCATGAAGGAGATATAACACAAATTCTCAACTCTTTGCTTCAA
GGCTATGACAACAAACTTCGCCCAGATATAGGAGTGAGGCCCACGGTAATTGAAACTGATGTTT
ACGTAAACAGCATTGGACCAGTTGATCCCATAAATATGGAATACACAATAGATATAATTTTTGC
CCAAACCTGGTTTGACAGTCGTTTAAAATTCAACAGTACCATGAAAGTGCTTATGCTTAACAGT
AATATGGTAGGAAAAATTTGGATTCCTGACACTTTCTTCCGAAACTCAAGAAAATCTGATGCAC
ATTGGATAACAACTCCTAACCGTCTGCTTCGAATTTGGAATGATGGACGAGTTCTATATACTCT
AAGATTGACAATTAATGCGGAATGTTATCTTCAGCTTCATAACTTTCCTATGGATGAACATTCC
TGTCCACTGGAATTTTCAAGCTATGGGTACCCTAAAAATGAAATTGAGTATAAGTGGAAAAAAC
CTTCTGTTGAAGTGGCTGATCCTAAATACTGGAGATTATATCAGTTTGCATTTGTAGGGTTACG
GAACTCGACTGAAATTTCTCACACAATCTCTGGAGATTATATTATCATGACAATTTTTTTTGAC
CTGAGCAGACGAATGGGATATTTCACTATTCAAACCTACATCCCATGTATTTTGACAGTTGTAC
TTTCTTGGGTGTCTTTTTGGATCAATAAAGATGCTGTACCTGCAAGAACATCACTTGGTATCAC
TACAGTTCTGACCATGACCACCCTGAGCACAATCGCCAGGAAGTCATTACCTAAGGTCTCCTAC
GTGACTGCGATGGATCTCTTTGTGTCCGTCTGTTTCATTTTTGTCTTTGCAGCCTTGATGGAAT
ATGGCACCTTGCATTACTTTACCAGCAACAAAAAGGGAAAGACCACTAGAAACAGAAAGCTAAA
GAATAAAAGCTCGATGTCCCCTGGACTCCATCCTGGATCCACTCTGATTCCAATGAATAGCATT
TCTCTGCCACATGGAGAAGAGGATTATGGGTATCAGTGTTTGGAGGGCAAGGATTGCGCCAGCT
TCTTCTGTTGCTTTGAAGACTGCAGAACAGGATCATGGAGGGAAGGGAGGATACACATCCGCAT
TGCTAAAATTGACTCCTATTCTCGAATATTTTTCCCAACAGCTTTTGCCCTGTTCAATCTGGTG
TATTGGGTTGGCTATCTTTACTTGTAAGTTCTATGTGCCAGGCCAAAATTGTAAGAAGTTTAAC
TAAATCCAATATAATCTCTTGCACTTCAGTAACGTGAAGTTTAAATTCAAAATGCAGAGAAACC
ACTGGTTAAAATGTAAAACCACTGTAACTGTTCTATGGCTTCATAGGTAAATAAAGCAGCAGCT
TTCATGTTAATTTACTTACATGTATGTCAAAGGGATTAGTTGCAAAATTCAATAGAGTAAAATA
GTACATATATTTTTACTTGAATCTTATTTATTTTACTAGTATCCTTGAGATTTTGAATTCATAA
GTTCCGTGGTTCATATTTGAAAGATGGAATACTTTAATGACTTTAATAATATTTTATTTAGATA
TAATATCACTGTTTGTAATGGTAGCCTAATCTCATGCCTAATGTTTATGTAGTAAGTTTTTGCT
TAGAAAATATAATTATTTTGATTTTTTTTCTTACACTTTATCTGTATGCTCTGTTTGGAGTAGA
GCTAGTTAAAACCATGAAGCCATGATTTCCTGGCATTTATATCCAGATGCATTCACTCTCAAGA
ACAAATTAAATTAGAAGAAAATGCCAATTTTCACCTTATTAAAAGGCCAGTTTTTATCTGTATT
TGAATCAACACTATTTCCTGACACCAATATTAAATAGAGCTGTAGTTACATTTAGTTTTGACAG
TTTACAAACTCGGATGGAAGCCACCATAGTCATTTCTTTTAAATTCAAGGTGAAAAAATAAAGT
TACATTTAACCATTTTATTCTCTGCCTCACAGCATTTATGAAGTATGAAGAAGTTCACACTGAA
ATGTTTAGATCTACTAACACTGAAATTAAATACAGAAAGAATTGATTTTTTATGTTCTACAAAA
GTATTACGTTCCCTAAATTTTCAAAAACATTGAAGAACAACAGTGCTCGTATTTACTCATTGTG
GATAAAGAATTATCTAGCAAATTGAGTAACAGATCATATTAGGGATACAGTCTTAAATATGTAC
TACCAATAATTGCCAGACTAAAAATATCCTAGAAATATAGTTTTAGGCGCGTGTCATATATTAT
CTTTTCTGGCTCCTACATTTGGACTCTTGTCAGATTTACATCTTTGTTATAAATTGTTATGATG
TTCTCTATTACAAAAAATGAGAGCAGGCTCAAAAATCATGTTAAAAGTGGAATTCTGTTAGAGG
CACCTCTAAGGAACATGATTGCTGGAGCCTTCTAAAGTCTTAGAGATAGGAGCAGAGAAAGCCT
CACTGTAGTATAAGGCCTGCTGGTTAACAGTTTCCCAAATGCTTCTTTTGTTAAGAGTAGAGTT
AACTCCAGGCTTTAATCACTACATTCCTGTAAATAGTTTGGCATCTCCATTGTTTATAAGAACT
CCACATTCATTCACTACCACCTAATTTTTTTGGAAGATCCCCAAAGTGATCTTGGAGATAACCT
TTAAAAACTGTTTTCATTGCCAGAGCAAGTATGAGGATACAGAGTTTTGTGATCAAAGCTTATA
TCCTATGGCATGTGGAAGGAGCTAGCACCTGCGCATTTGACACTAGTTTTTAACACAGTAATTC
CCCCACATGGTTAGTGAATATATGAGTGGGGCTCTGGCATGGTTATAGTTACTGTTTTAGAATA
TATAGGGTTTTTTTTAATCTAAGTACATTTCATTGTGTATTCCTCAGCTAAATCAGAATTTTTT
TTAATTTTGATTCTAAACCTCTGAAAAAAATGTAAGCATGAATTAAGTGATAATGCCCAAATAT
CCACCGACACTACCTTTTTTGAATGGAGAGCCAAATTAAACTTTGGCCGTGTATATATTCACTT
ACAAATTATTCATGCATTCACTTTTTATAGCTGAGTTACTGATGGATATTCTTAATGTGAACAC
TCATTTATGGGTAAATGGAAAATGAAGTTTCATGAAGAATAAACACCACTAAAATGTGTTATGG
CTATTTCCATGTTCTAAGCTATAACCTGTCAATTTCATGAAGGCAATTTAAATTCTGGGATTCT
TCAACTTTATCAGAGCATGACTGTATTTTAAAATACTTTAAAATGCTTAATATAAATAGCTTTG
ATTTTTCTCGTTGGTGTTCCATTAACTTGGCTTTAAATGTTGGCAATATTAACAAGTGGAAATA
AAATTAATAAAAATATGAAAGACACTTTACTATATACACTCATTGTATAGATCATGGAAACAAG
CACTTTGTTTTCAAAGCCAGTGGCATTTTGAGCAGTTTTGTTTAAATATGTAGCAAAAGAGAGG
TGTACAAATCATAATATTTCTAAAAATGAGAACAAACAGGTAAAGATGCAGTTAGATTCTGTTT
ACAAGAAATCAAGTCAAACTTATTTTCGGGAAATGCAGTCTAATTCCTGACCCCTTCTTCTTTC
AAGAAGTTTTACCATCTTTAGAAACAATTTTCTGAGAAATCCTCCTCTTCTTGCAGAGTTACGT
CTGAATTTATTGGGGTCACTGGAATTTGCACTTCCTAGCTGCTTTAAATGATTTTAACACTAAC
ATAGATCAAAGAAGTGGATAGAGGATAGAAAGCATAAATGGAGCAGAAGGATTTAGAATAATTT
GGAAAACGTTAATTTATATAAACCCACTCTCTGAATATGTGAAAGTTCTGACAAGGAAAATTGT
GATTAGTACAATCTTATTCTCTTGAATTTACAATTGCATGATAATATTTTATTCTTGAATTGCA
TAGGAAAACTTACACTCACTTGAAATTAATTCCTGAAATGCCAAGTAGTTTCTGGGGGGGAAAA
AAAAACAGGAGGGAAGAAAGAGGGAAGAAAGAAAGAAAGAAAAGAACTTAGACTCCCTGAGAAT
TTGGTAAGGAAAGGGCAAAATTTGTCAGTAAATCTAAAGTTTTAATGTAAATAGAAATCAGACA
ATTTATTTAATTTTTTTAAAGTTAAAGACATAGATTTCATTAAGGAGTTGTCATAACGGATCAT
CTATAAGTCAAAACACAGTAAATGTGTGTAATAATATAGACAATCACCAGGTTGTTTTTTCCTT
TAGCATATTCCCATATCTGACATCAATATACAGTCATAGAATATGCTAGTTTTGCTTAAATAGC
AAGGCCAATATTGAGGGCTGCATGCTTGCCAATGATTGAGCATCAAAAAGAATGATTTATAGTA
GTCTCACATCAAGGGACCATAATTGTAAAATGTGAAATTGTATTCCAAGTTAATATGCTGTAAC
AAAATGCATCTTATACTTTGTTTACACAAGAGGAGATTTAGATAGGATCACTTGCTCAAGTAAA
ATTTAGGTTAATAACCAATAAGTGAATAAGCACCTAATAAATGAATAAGTACATATGTAGGATT
ATCAAACTTCTATACCAGGGCCCATTTTCACTTGCAAAATTTCCTGTAGCAAGATACCAGATTC
TCAATTATTTTTATTGATCTTACTTAGCACTGGAATTGAAGTGATTCAATGGAAGATTTAATGA
CTTAACATTTGTCCCACCACAAACATTTTTGAAAATCAGCTACTTTTCTTTACACCATCAAATT
CACTTTACTTCTCAGTGTCTTTTCATATGAAGTCCAGACGTACTTGGTCTCATGTTTCTGTTGG
TTATCATTGTTTTTCACTGTTACAAATCCCTTGACATGCCACTGTAAAGTCATAGAAGCCATTA
CCAAATCATTGTCAAAAACATTCCAGATAGGGACGCCTGGGTGGCACAGTCAGTTAAGCAACCT
ACTCTTGGTTTCAGCACAGGTTGGGACCTTGGAGTCATGTGATCAAGCCCTGCATGGGCATTCA
TGCTCAGGGTGGAGTCTGCTTGGAATTCTCTCTGTCTCCCTCTGCTTCTCTCTAAAAGTGGATA
AAGAAATCTTAAAAAATAAAAGATTTCAAATGGAGTCTCCAAACACTATCAACCATACTGCTCT
AGGAAAGATAAGGTCAGTTCCGCCTTTTTTGTCTTTGCATTTTGGAAGTGACATCTAGTGCAAA
ATATTCATGCAGCACTTTCCATAGATAAGATACAAGAGGGAATATACAAAGATGAACTCTCAAG
AAACGATAGCCTGAGCATCAGTTATACAATTTAAGGGAGGGAGGATAACTCTGGCAAAGGTTCT
ACAGCTGGGATCTCGAGAATTCAGTATATGCCGCTACGTGAGGTTAACTAGGGATCATACTTCC
GGTTGAGTAAACAGCTTGCATGAAGAAACAGAAGCATGGGCACAAATAAAAGTTCCATTTTATT
TGAAAATTGAGATGCATATAGAGATAATTAAAGATGAGACAAAGATAGGTCCAGTCCTGTGGCA
AAGAGGCAAGAATACAAACCTCAGGGGACTGGGTGATACTCTAAATCCATGGAGAGTTCAAAAA
GATACTTAAGTAGAAAAGAGCCATTATTGATACTGTGGAAATTTCCTTGTATTGGTGTGTGCTG
TTCAGAGTAAGAAAAGCCAAAGCCTGTTAGGAAGCAACTGTACAACAGGAGGTGAGGGAGGAGG
AAGGTTAAAGTGCAGTGATAGTTGAGTGGGGGAGAGCGAGAGCCAGCCACCTGAACTAGAAGGG
AAAATGGAGATGAAGCTGAGATGGACAGACAGCATTAACTGAGTGATATGGTTGGTGTGCGCGG
GGCACCAGGGCTCCTGTACTGAATGGTACAGACGTGTGTACAAATAGACTCTAACCCAGTGTAA
AGAAGTTGATGCATTACAGCCTGGCTTGCTGTTACTCTGAACATTTTAATCAAATGCTTATTTT
TTTTATGTTGATCTGTGTTTCTCCCACATTAGGGATGAGGGCAGGAATAATCTCCTGAAATACA
AATCATAAAGGATTCTGTCTAGTTTATTAGTATTATTAATATTATTATTATTTAAATCTATTTC
CCATTGTAAGGGTTTTCTCTTCAAATACTTCTCTTTCTTTCTGAGGGAAAAACATGTATTTGAA
CAAAGAAAGGAGGTAAACTGGCAATAGAAAGAGGCTGAGATGGGACGAGATAAATCCAAGGATT
TGTATTCTCACTTTCTGAAATACTTGTCTCAAAATAAATACGTAGATTTTTATTGTTGTGCAAT
GAAATGTACGTGGGCCGTGAATAGTTGGACTCTGTGAATGGATAAGATAAGCCCGTGATAACTG
TAATGCAATTGAGCACAAAGGAGTAAATAACAGACTTTAAAGACATGGCTGACCTAAATGGAAA
TAGTTTGGGTCTCGATAAATCACTGTAATAACAGCTATTTGCATCCATTAAGTGTATCTGGTCA
TGTCGTATAATCAAGTTTCATGGCTTGTGATTGTGACGACGTCTGATGTCTGCTTCTGCCTTAT
TTTGGAGAGCATTTTGTGAGCCTGTGGCAAAAGTATTCAGCTTTTCAAAGTGTTCTGTACTTTC
ATGATTCTGAGTGCAAAATAAAGTCAGTAACTTGTCATGAAAAAA

hide sequence

RefSeq Acc Id:

XM_038429124 ⟹ XP_038285052

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	13	42,147,102 - 42,212,014 (-)	NCBI

RefSeq Acc Id:

XM_038493671 ⟹ XP_038349599

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	42,478,701 - 42,559,787 (-)	NCBI

RefSeq Acc Id:

XM_038493672 ⟹ XP_038349600

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	42,478,701 - 42,559,706 (-)	NCBI

RefSeq Acc Id:

XM_038493673 ⟹ XP_038349601

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	13	42,478,701 - 42,545,687 (-)	NCBI

RefSeq Acc Id:

XM_038555986 ⟹ XP_038411914

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	42,891,593 - 42,972,762 (-)	NCBI

RefSeq Acc Id:

XM_038555987 ⟹ XP_038411915

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	42,891,593 - 42,972,681 (-)	NCBI

RefSeq Acc Id:

XM_038555988 ⟹ XP_038411916

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	13	42,891,593 - 42,958,639 (-)	NCBI

RefSeq Acc Id:

XM_038619937 ⟹ XP_038475865

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	42,542,428 - 42,621,417 (-)	NCBI

RefSeq Acc Id:

XM_038619938 ⟹ XP_038475866

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	42,542,428 - 42,621,336 (-)	NCBI

RefSeq Acc Id:

XM_038619939 ⟹ XP_038475867

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	13	42,542,428 - 42,607,314 (-)	NCBI

RefSeq Acc Id:

XM_038685530 ⟹ XP_038541458

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	42,802,382 - 42,881,664 (-)	NCBI

RefSeq Acc Id:

XM_038685531 ⟹ XP_038541459

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	42,802,382 - 42,881,583 (-)	NCBI

RefSeq Acc Id:

XM_038685532 ⟹ XP_038541460

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	13	42,802,382 - 42,867,536 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003639504	(Get FASTA)	NCBI Sequence Viewer
	XP_022282661	(Get FASTA)	NCBI Sequence Viewer
	XP_038285052	(Get FASTA)	NCBI Sequence Viewer
	XP_038349599	(Get FASTA)	NCBI Sequence Viewer
	XP_038349600	(Get FASTA)	NCBI Sequence Viewer
	XP_038349601	(Get FASTA)	NCBI Sequence Viewer
	XP_038411914	(Get FASTA)	NCBI Sequence Viewer
	XP_038411915	(Get FASTA)	NCBI Sequence Viewer
	XP_038411916	(Get FASTA)	NCBI Sequence Viewer
	XP_038475865	(Get FASTA)	NCBI Sequence Viewer
	XP_038475866	(Get FASTA)	NCBI Sequence Viewer
	XP_038475867	(Get FASTA)	NCBI Sequence Viewer
	XP_038541458	(Get FASTA)	NCBI Sequence Viewer
	XP_038541459	(Get FASTA)	NCBI Sequence Viewer
	XP_038541460	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000069454.1
	ENSCAFP00030020300.1
	ENSCAFP00030020392.1
	ENSCAFP00030020450.1
	ENSCAFP00845021933
	ENSCAFP00845021933.1

RefSeq Acc Id:	XP_003639504 ⟸ XM_003639456
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0RIQ2 (UniProtKB/TrEMBL), A0A8I3NLX4 (UniProtKB/TrEMBL), A0A8C0JR68 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPPMGPWKAPLCSPFLLGSQSRVVRLLFLLLTLHLGNCVDKVDDEDDEDLTVNKTWVLAPKIHE GDITQILNSLLQGYDNKLRPDIGVRPTVIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDSRLK FNSTMKVLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRIWNDGRVLYTLRLTINAECY LQLHNFPMDEHSCPLEFSSYGYPKNEIEYKWKKPSVEVADPKYWRLYQFAFVGLRNSTEISHTI SGDYIIMTIFFDLSRRMGYFTIQTYIPCILTVVLSWVSFWINKDAVPARTSLGITTVLTMTTLS TIARKSLPKVSYVTAMDLFVSVCFIFVFAALMEYGTLHYFTSNKKGKTTRNRKLKNKSSMSPGL HPGSTLIPMNSISLPHGEEDYGYQCLEGKDCASFFCCFEDCRTGSWREGRIHIRIAKIDSYSRI FFPTAFALFNLVYWVGYLYL hide sequence

RefSeq Acc Id:	XP_022282661 ⟸ XM_022426953
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0N7E7 (UniProtKB/TrEMBL), A0A8C0JR68 (UniProtKB/TrEMBL)
- Sequence:	show sequence MYFWICLISPTVDKVDDEDDEDLTVNKTWVLAPKIHEGDITQILNSLLQGYDNKLRPDIGVRPT VIETDVYVNSIGPVDPINMEYTIDIIFAQTWFDSRLKFNSTMKVLMLNSNMVGKIWIPDTFFRN SRKSDAHWITTPNRLLRIWNDGRVLYTLRLTINAECYLQLHNFPMDEHSCPLEFSSYGYPKNEI EYKWKKPSVEVADPKYWRLYQFAFVGLRNSTEISHTISGDYIIMTIFFDLSRRMGYFTIQTYIP CILTVVLSWVSFWINKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFV FAALMEYGTLHYFTSNKKGKTTRNRKLKNKSSMSPGLHPGSTLIPMNSISLPHGEEDYGYQCLE GKDCASFFCCFEDCRTGSWREGRIHIRIAKIDSYSRIFFPTAFALFNLVYWVGYLYL hide sequence

Ensembl Acc Id:

ENSCAFP00000045447 ⟸ ENSCAFT00000078990

Ensembl Acc Id:

ENSCAFP00000002762 ⟸ ENSCAFT00000002978

RefSeq Acc Id:	XP_038349599 ⟸ XM_038493671
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038349600 ⟸ XM_038493672
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038349601 ⟸ XM_038493673
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038475865 ⟸ XM_038619937
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038475866 ⟸ XM_038619938
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038475867 ⟸ XM_038619939
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038541458 ⟸ XM_038685530
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0RIQ2 (UniProtKB/TrEMBL), A0A8I3NLX4 (UniProtKB/TrEMBL), A0A8C0JR68 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038541459 ⟸ XM_038685531
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0N7E7 (UniProtKB/TrEMBL), A0A8C0JR68 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038541460 ⟸ XM_038685532
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038285052 ⟸ XM_038429124
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038411914 ⟸ XM_038555986
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0JR68 (UniProtKB/TrEMBL), A0A8C0RIQ2 (UniProtKB/TrEMBL), A0A8I3NLX4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038411915 ⟸ XM_038555987
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0JR68 (UniProtKB/TrEMBL), A0A8C0N7E7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038411916 ⟸ XM_038555988
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSCAFP00845021933 ⟸ ENSCAFT00845027865

Protein Domains

Neurotransmitter-gated ion-channel ligand-binding Neurotransmitter-gated ion-channel transmembrane

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000001878	Ensembl
	ENSCAFG00000055148	UniProtKB/TrEMBL
	ENSCAFG00030012568	UniProtKB/TrEMBL
	ENSCAFG00845015632	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000107989.1	UniProtKB/TrEMBL
	ENSCAFT00030023274.1	UniProtKB/TrEMBL
	ENSCAFT00030023391.1	UniProtKB/TrEMBL
	ENSCAFT00030023460.1	UniProtKB/TrEMBL
	ENSCAFT00845027865	ENTREZGENE
	ENSCAFT00845027865.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.58.390	UniProtKB/TrEMBL
	2.70.170.10	UniProtKB/TrEMBL
InterPro	GABAA/Glycine_rcpt	UniProtKB/TrEMBL
	GABBAg1_rcpt	UniProtKB/TrEMBL
	GABBAg_rcpt	UniProtKB/TrEMBL
	Neur_chan_lig-bd	UniProtKB/TrEMBL
	Neur_chan_lig-bd_sf	UniProtKB/TrEMBL
	Neur_channel	UniProtKB/TrEMBL
	Neuro-gated_channel_TM_sf	UniProtKB/TrEMBL
	Neuro_actylchol_rec	UniProtKB/TrEMBL
	Neurotrans-gated_channel_TM	UniProtKB/TrEMBL
	Neurotransmitter_ion_chnl_CS	UniProtKB/TrEMBL
KEGG Report	cfa:100856619	UniProtKB/TrEMBL
NCBI Gene	GABRG1	ENTREZGENE
PANTHER	PTHR18945	UniProtKB/TrEMBL
Pfam	Neur_chan_LBD	UniProtKB/TrEMBL
	Neur_chan_memb	UniProtKB/TrEMBL
PRINTS	GABAARECEPTR	UniProtKB/TrEMBL
	GABAARGAMMA	UniProtKB/TrEMBL
	GABAARGAMMA1	UniProtKB/TrEMBL
	NRIONCHANNEL	UniProtKB/TrEMBL
PROSITE	NEUROTR_ION_CHANNEL	UniProtKB/TrEMBL
Superfamily-SCOP	SSF63712	UniProtKB/TrEMBL
	SSF90112	UniProtKB/TrEMBL
UniProt	A0A8C0JR68	ENTREZGENE
	A0A8C0N7E7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0RIQ2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0RIV3_CANLF	UniProtKB/TrEMBL
	A0A8I3NLX4	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:41063	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2020-05-11	GABRG1	gamma-aminobutyric acid type A receptor subunit gamma1	GABRG1	gamma-aminobutyric acid type A receptor gamma1 subunit	Symbol and/or name change	19259463	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - MGI