MCM9 (minichromosome maintenance 9 homologous recombination repair factor) - Rat Genome Database

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Gene: MCM9 (minichromosome maintenance 9 homologous recombination repair factor) Canis lupus familiaris
Analyze
Symbol: MCM9
Name: minichromosome maintenance 9 homologous recombination repair factor
RGD ID: 12125225
Description: ENCODES a protein that exhibits ATP binding (inferred); ATP hydrolysis activity (inferred); chromatin binding (inferred); INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH autistic disorder (ortholog); congenital disorder of glycosylation Iaa (ortholog); epilepsy (ortholog); FOUND IN MCM8-MCM9 complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: DNA helicase MCM9; minichromosome maintenance complex component 9
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1158,746,637 - 58,862,550 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl158,767,159 - 58,859,282 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha159,549,381 - 59,665,283 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0158,931,274 - 59,047,177 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl158,951,799 - 59,043,905 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1158,849,839 - 58,947,004 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0158,673,270 - 58,789,141 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0159,304,753 - 59,420,717 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromosome  (IEA)
MCM complex  (IEA)
MCM8-MCM9 complex  (IEA,ISO)
nucleus  (IEA)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
MCM9
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1158,746,637 - 58,862,550 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl158,767,159 - 58,859,282 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha159,549,381 - 59,665,283 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0158,931,274 - 59,047,177 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl158,951,799 - 59,043,905 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1158,849,839 - 58,947,004 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0158,673,270 - 58,789,141 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0159,304,753 - 59,420,717 (-)NCBIUU_Cfam_GSD_1.0
MCM9
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386118,813,455 - 118,935,159 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6118,813,442 - 118,935,162 (-)EnsemblGRCh38hg38GRCh38
GRCh376119,134,618 - 119,256,324 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366119,273,461 - 119,298,002 (-)NCBINCBI36Build 36hg18NCBI36
Build 346119,273,462 - 119,297,978NCBI
Celera6119,976,419 - 120,000,945 (-)NCBICelera
Cytogenetic Map6q22.31NCBI
HuRef6116,716,601 - 116,838,443 (-)NCBIHuRef
CHM1_16119,398,623 - 119,520,384 (-)NCBICHM1_1
T2T-CHM13v2.06119,999,276 - 120,121,020 (-)NCBIT2T-CHM13v2.0
Mcm9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391053,412,411 - 53,507,251 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1053,412,411 - 53,506,535 (-)EnsemblGRCm39 Ensembl
GRCm381053,536,315 - 53,630,006 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1053,536,315 - 53,630,439 (-)EnsemblGRCm38mm10GRCm38
MGSCv371053,257,130 - 53,350,245 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361053,225,739 - 53,318,854 (-)NCBIMGSCv36mm8
Celera1054,365,478 - 54,457,930 (-)NCBICelera
Cytogenetic Map10B3NCBI
cM Map1027.21NCBI
Mcm9
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82033,369,325 - 33,472,243 (-)NCBIGRCr8
mRatBN7.22032,818,219 - 32,929,577 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2032,844,951 - 32,929,600 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.02034,818,093 - 34,930,157 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2034,846,804 - 34,929,965 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02036,601,544 - 36,687,576 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42032,217,045 - 32,300,032 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12032,291,717 - 32,310,543 (-)NCBI
Celera2034,210,818 - 34,321,841 (-)NCBICelera
Cytogenetic Map20q11NCBI
Mcm9
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554361,642,337 - 1,661,362 (-)NCBIChiLan1.0ChiLan1.0
MCM9
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25138,825,818 - 138,948,860 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16136,720,258 - 136,845,920 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06116,620,188 - 116,743,435 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16120,763,329 - 120,881,865 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6120,763,329 - 120,881,865 (-)Ensemblpanpan1.1panPan2
Mcm9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404946109,550,366 - 109,627,305 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049366581,657,226 - 1,734,150 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MCM9
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1143,171,906 - 43,268,533 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2148,322,132 - 48,416,708 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MCM9
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11354,945,668 - 55,069,869 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1354,945,786 - 55,070,328 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604027,269,880 - 27,390,097 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mcm9
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462479811,290,074 - 11,367,495 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462479811,287,882 - 11,370,040 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MCM9
1065 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 6 2 8 4
Low 5 5 16 6 6 6 6 6 10 6 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022419463 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022419467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022419468 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022419469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022419472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022419474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022419475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022419476 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038465986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526651 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038526660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038543186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038543271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038590950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038590951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038590952 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038590953 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038590954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038590955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038590956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038590957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038590958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038590959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038590960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654749 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654750 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654755 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038654757 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_541221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002627240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002627242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005353829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005353830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005388402 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005388403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005421357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005421358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000001448   ⟹   ENSCAFP00000001334
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl158,767,159 - 58,859,282 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000048586   ⟹   ENSCAFP00000042674
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl158,767,159 - 58,859,282 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000069750   ⟹   ENSCAFP00000045082
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl158,767,159 - 58,859,282 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845012651   ⟹   ENSCAFP00845009871
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl158,951,799 - 59,043,905 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845012712   ⟹   ENSCAFP00845009916
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl158,951,799 - 59,043,905 (-)Ensembl
RefSeq Acc Id: XM_022419463   ⟹   XP_022275171
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1158,766,114 - 58,862,548 (-)NCBI
Dog10K_Boxer_Tasha159,567,767 - 59,665,281 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022419467   ⟹   XP_022275175
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1158,746,637 - 58,862,549 (-)NCBI
Dog10K_Boxer_Tasha159,549,381 - 59,665,281 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022419468   ⟹   XP_022275176
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1158,771,746 - 58,862,549 (-)NCBI
Dog10K_Boxer_Tasha159,574,475 - 59,665,281 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022419469   ⟹   XP_022275177
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1158,770,394 - 58,862,549 (-)NCBI
Dog10K_Boxer_Tasha159,573,134 - 59,665,281 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022419472   ⟹   XP_022275180
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1158,780,342 - 58,862,550 (-)NCBI
Dog10K_Boxer_Tasha159,583,078 - 59,665,283 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022419474   ⟹   XP_022275182
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1158,789,301 - 58,862,549 (-)NCBI
Dog10K_Boxer_Tasha159,591,927 - 59,665,282 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022419475   ⟹   XP_022275183
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1158,788,959 - 58,862,549 (-)NCBI
Dog10K_Boxer_Tasha159,591,578 - 59,665,282 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022419476   ⟹   XP_022275184
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1158,835,015 - 58,862,549 (-)NCBI
Dog10K_Boxer_Tasha159,635,848 - 59,665,282 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038465986   ⟹   XP_038321914
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1158,849,839 - 58,947,004 (-)NCBI
RefSeq Acc Id: XM_038526650   ⟹   XP_038382578
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0159,323,142 - 59,420,715 (-)NCBI
RefSeq Acc Id: XM_038526651   ⟹   XP_038382579
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0159,323,142 - 59,420,715 (-)NCBI
RefSeq Acc Id: XM_038526652   ⟹   XP_038382580
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0159,323,142 - 59,420,715 (-)NCBI
RefSeq Acc Id: XM_038526653   ⟹   XP_038382581
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0159,323,142 - 59,420,241 (-)NCBI
RefSeq Acc Id: XM_038526654   ⟹   XP_038382582
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0159,304,753 - 59,420,715 (-)NCBI
RefSeq Acc Id: XM_038526655   ⟹   XP_038382583
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0159,329,859 - 59,420,715 (-)NCBI
RefSeq Acc Id: XM_038526656   ⟹   XP_038382584
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0159,328,499 - 59,420,715 (-)NCBI
RefSeq Acc Id: XM_038526657   ⟹   XP_038382585
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0159,338,461 - 59,420,717 (-)NCBI
RefSeq Acc Id: XM_038526658   ⟹   XP_038382586
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0159,347,308 - 59,420,716 (-)NCBI
RefSeq Acc Id: XM_038526659   ⟹   XP_038382587
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0159,346,959 - 59,420,716 (-)NCBI
RefSeq Acc Id: XM_038526660   ⟹   XP_038382588
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0159,392,057 - 59,420,716 (-)NCBI
RefSeq Acc Id: XM_038543186   ⟹   XP_038399114
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha159,567,767 - 59,665,281 (-)NCBI
RefSeq Acc Id: XM_038543271   ⟹   XP_038399199
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha159,567,767 - 59,665,281 (-)NCBI
RefSeq Acc Id: XM_038590950   ⟹   XP_038446878
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0158,691,649 - 58,789,139 (-)NCBI
RefSeq Acc Id: XM_038590951   ⟹   XP_038446879
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0158,691,649 - 58,789,139 (-)NCBI
RefSeq Acc Id: XM_038590952   ⟹   XP_038446880
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0158,691,649 - 58,789,139 (-)NCBI
RefSeq Acc Id: XM_038590953   ⟹   XP_038446881
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0158,691,649 - 58,788,666 (-)NCBI
RefSeq Acc Id: XM_038590954   ⟹   XP_038446882
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0158,673,270 - 58,789,139 (-)NCBI
RefSeq Acc Id: XM_038590955   ⟹   XP_038446883
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0158,698,361 - 58,789,139 (-)NCBI
RefSeq Acc Id: XM_038590956   ⟹   XP_038446884
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0158,697,021 - 58,789,139 (-)NCBI
RefSeq Acc Id: XM_038590957   ⟹   XP_038446885
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0158,706,962 - 58,789,141 (-)NCBI
RefSeq Acc Id: XM_038590958   ⟹   XP_038446886
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0158,715,823 - 58,789,140 (-)NCBI
RefSeq Acc Id: XM_038590959   ⟹   XP_038446887
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0158,715,474 - 58,789,140 (-)NCBI
RefSeq Acc Id: XM_038590960   ⟹   XP_038446888
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0158,759,702 - 58,789,140 (-)NCBI
RefSeq Acc Id: XM_038654746   ⟹   XP_038510674
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0158,949,667 - 59,047,175 (-)NCBI
RefSeq Acc Id: XM_038654747   ⟹   XP_038510675
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0158,949,667 - 59,047,175 (-)NCBI
RefSeq Acc Id: XM_038654748   ⟹   XP_038510676
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0158,949,667 - 59,047,175 (-)NCBI
RefSeq Acc Id: XM_038654749   ⟹   XP_038510677
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0158,949,667 - 59,046,703 (-)NCBI
RefSeq Acc Id: XM_038654750   ⟹   XP_038510678
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0158,931,274 - 59,047,175 (-)NCBI
RefSeq Acc Id: XM_038654751   ⟹   XP_038510679
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0158,956,385 - 59,047,175 (-)NCBI
RefSeq Acc Id: XM_038654752   ⟹   XP_038510680
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0158,955,036 - 59,047,175 (-)NCBI
RefSeq Acc Id: XM_038654753   ⟹   XP_038510681
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0158,964,975 - 59,047,177 (-)NCBI
RefSeq Acc Id: XM_038654755   ⟹   XP_038510683
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0158,973,867 - 59,047,176 (-)NCBI
RefSeq Acc Id: XM_038654756   ⟹   XP_038510684
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0158,973,485 - 59,047,176 (-)NCBI
RefSeq Acc Id: XM_038654757   ⟹   XP_038510685
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0159,018,538 - 59,047,176 (-)NCBI
RefSeq Acc Id: XM_541221   ⟹   XP_541221
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1158,766,114 - 58,862,059 (-)NCBI
Dog10K_Boxer_Tasha159,567,767 - 59,664,808 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002627240
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1158,746,639 - 58,862,549 (-)NCBI
Dog10K_Boxer_Tasha159,549,383 - 59,665,281 (-)NCBI
Sequence:
RefSeq Acc Id: XR_002627242
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1158,773,008 - 58,862,549 (-)NCBI
Dog10K_Boxer_Tasha159,575,746 - 59,665,281 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005353829
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0159,304,755 - 59,420,715 (-)NCBI
RefSeq Acc Id: XR_005353830
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0159,331,129 - 59,420,715 (-)NCBI
RefSeq Acc Id: XR_005388402
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0158,673,272 - 58,789,139 (-)NCBI
RefSeq Acc Id: XR_005388403
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0158,699,632 - 58,789,139 (-)NCBI
RefSeq Acc Id: XR_005421357
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0158,931,276 - 59,047,175 (-)NCBI
RefSeq Acc Id: XR_005421358
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0158,957,655 - 59,047,175 (-)NCBI
Protein Sequences
Protein RefSeqs XP_022275171 (Get FASTA)   NCBI Sequence Viewer  
  XP_022275175 (Get FASTA)   NCBI Sequence Viewer  
  XP_022275176 (Get FASTA)   NCBI Sequence Viewer  
  XP_022275177 (Get FASTA)   NCBI Sequence Viewer  
  XP_022275180 (Get FASTA)   NCBI Sequence Viewer  
  XP_022275182 (Get FASTA)   NCBI Sequence Viewer  
  XP_022275183 (Get FASTA)   NCBI Sequence Viewer  
  XP_022275184 (Get FASTA)   NCBI Sequence Viewer  
  XP_038321914 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382578 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382579 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382580 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382581 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382582 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382583 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382584 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382585 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382586 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382587 (Get FASTA)   NCBI Sequence Viewer  
  XP_038382588 (Get FASTA)   NCBI Sequence Viewer  
  XP_038399114 (Get FASTA)   NCBI Sequence Viewer  
  XP_038399199 (Get FASTA)   NCBI Sequence Viewer  
  XP_038446878 (Get FASTA)   NCBI Sequence Viewer  
  XP_038446879 (Get FASTA)   NCBI Sequence Viewer  
  XP_038446880 (Get FASTA)   NCBI Sequence Viewer  
  XP_038446881 (Get FASTA)   NCBI Sequence Viewer  
  XP_038446882 (Get FASTA)   NCBI Sequence Viewer  
  XP_038446883 (Get FASTA)   NCBI Sequence Viewer  
  XP_038446884 (Get FASTA)   NCBI Sequence Viewer  
  XP_038446885 (Get FASTA)   NCBI Sequence Viewer  
  XP_038446886 (Get FASTA)   NCBI Sequence Viewer  
  XP_038446887 (Get FASTA)   NCBI Sequence Viewer  
  XP_038446888 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510674 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510675 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510676 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510677 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510678 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510679 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510680 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510681 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510683 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510684 (Get FASTA)   NCBI Sequence Viewer  
  XP_038510685 (Get FASTA)   NCBI Sequence Viewer  
  XP_541221 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000001334.4
  ENSCAFP00000045082.1
  ENSCAFP00030020075.1
  ENSCAFP00845009871
  ENSCAFP00845009871.1
  ENSCAFP00845009916
  ENSCAFP00845009916.1
Reference Protein Sequences
RefSeq Acc Id: XP_541221   ⟸   XM_541221
- Peptide Label: isoform X1
- UniProtKB: A0A8P0N445 (UniProtKB/TrEMBL),   A0A8C0LBA7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022275175   ⟸   XM_022419467
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_022275171   ⟸   XM_022419463
- Peptide Label: isoform X3
- UniProtKB: A0A8P0SY51 (UniProtKB/TrEMBL),   A0A8C0LBA7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022275177   ⟸   XM_022419469
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_022275176   ⟸   XM_022419468
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_022275180   ⟸   XM_022419472
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_022275183   ⟸   XM_022419475
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_022275182   ⟸   XM_022419474
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_022275184   ⟸   XM_022419476
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: ENSCAFP00000001334   ⟸   ENSCAFT00000001448
RefSeq Acc Id: ENSCAFP00000045082   ⟸   ENSCAFT00000069750
RefSeq Acc Id: ENSCAFP00000042674   ⟸   ENSCAFT00000048586
RefSeq Acc Id: XP_038321914   ⟸   XM_038465986
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038446882   ⟸   XM_038590954
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038446879   ⟸   XM_038590951
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038446880   ⟸   XM_038590952
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038446878   ⟸   XM_038590950
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038446881   ⟸   XM_038590953
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038446884   ⟸   XM_038590956
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038446883   ⟸   XM_038590955
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038446885   ⟸   XM_038590957
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038446887   ⟸   XM_038590959
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038446886   ⟸   XM_038590958
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038446888   ⟸   XM_038590960
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038510678   ⟸   XM_038654750
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038510675   ⟸   XM_038654747
- Peptide Label: isoform X2
- UniProtKB: A0A8C0NFG9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038510676   ⟸   XM_038654748
- Peptide Label: isoform X3
- UniProtKB: A0A8I3NGK4 (UniProtKB/TrEMBL),   A0A8C0LBA7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038510674   ⟸   XM_038654746
- Peptide Label: isoform X1
- UniProtKB: A0A8I3N514 (UniProtKB/TrEMBL),   A0A8C0LBA7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038510677   ⟸   XM_038654749
- Peptide Label: isoform X1
- UniProtKB: A0A8I3N514 (UniProtKB/TrEMBL),   A0A8C0LBA7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038510680   ⟸   XM_038654752
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038510679   ⟸   XM_038654751
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038510681   ⟸   XM_038654753
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038510684   ⟸   XM_038654756
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038510683   ⟸   XM_038654755
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038510685   ⟸   XM_038654757
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038399199   ⟸   XM_038543271
- Peptide Label: isoform X2
- UniProtKB: A0A8C0NFG9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038399114   ⟸   XM_038543186
- Peptide Label: isoform X1
- UniProtKB: A0A8P0N445 (UniProtKB/TrEMBL),   A0A8C0LBA7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382582   ⟸   XM_038526654
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038382579   ⟸   XM_038526651
- Peptide Label: isoform X2
- UniProtKB: A0A8C0NFG9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382580   ⟸   XM_038526652
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LBA7 (UniProtKB/TrEMBL),   A0A8P0SY51 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382578   ⟸   XM_038526650
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LBA7 (UniProtKB/TrEMBL),   A0A8P0N445 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382581   ⟸   XM_038526653
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LBA7 (UniProtKB/TrEMBL),   A0A8P0N445 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038382584   ⟸   XM_038526656
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038382583   ⟸   XM_038526655
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038382585   ⟸   XM_038526657
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038382587   ⟸   XM_038526659
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038382586   ⟸   XM_038526658
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038382588   ⟸   XM_038526660
- Peptide Label: isoform X10
RefSeq Acc Id: ENSCAFP00845009916   ⟸   ENSCAFT00845012712
RefSeq Acc Id: ENSCAFP00845009871   ⟸   ENSCAFT00845012651
Protein Domains
MCM

Promoters
RGD ID:13682041
Promoter ID:EPDNEW_C109
Type:multiple initiation site
Name:MCM9_1
Description:minichromosome maintenance 9 homologous recombination repairfactor
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1158,862,209 - 58,862,269EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000000938 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030012382 UniProtKB/TrEMBL
  ENSCAFG00845007138 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000001448.5 UniProtKB/TrEMBL
  ENSCAFT00000069750.2 UniProtKB/TrEMBL
  ENSCAFT00030023006.1 UniProtKB/TrEMBL
  ENSCAFT00845012651 ENTREZGENE
  ENSCAFT00845012651.1 UniProtKB/TrEMBL
  ENSCAFT00845012712 ENTREZGENE
  ENSCAFT00845012712.1 UniProtKB/TrEMBL
Gene3D-CATH 2.40.50.140 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
InterPro AAA+_ATPase UniProtKB/TrEMBL
  MCM UniProtKB/TrEMBL
  MCM_dom UniProtKB/TrEMBL
  MCM_lid UniProtKB/TrEMBL
  MCM_OB UniProtKB/TrEMBL
  NA-bd_OB-fold UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene MCM9 ENTREZGENE
PANTHER DNA HELICASE MCM9 UniProtKB/TrEMBL
  PTHR11630 UniProtKB/TrEMBL
Pfam MCM UniProtKB/TrEMBL
  MCM_lid UniProtKB/TrEMBL
  MCM_OB UniProtKB/TrEMBL
PRINTS MCMFAMILY UniProtKB/TrEMBL
PROSITE MCM_2 UniProtKB/TrEMBL
SMART AAA UniProtKB/TrEMBL
  MCM UniProtKB/TrEMBL
Superfamily-SCOP SSF50249 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt A0A8C0LBA7 ENTREZGENE
  A0A8C0NFG9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N514 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NGK4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0N445 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SY51 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:43089 ENTREZGENE