AKAP5 (A-kinase anchoring protein 5) - Rat Genome Database

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Gene: AKAP5 (A-kinase anchoring protein 5) Canis lupus familiaris
Analyze
Symbol: AKAP5
Name: A-kinase anchoring protein 5
RGD ID: 12123977
Description: ENCODES a protein that exhibits actin binding (ortholog); adenylate cyclase binding (ortholog); cadherin binding (ortholog); INVOLVED IN amylase secretion (ortholog); cellular protein complex disassembly (ortholog); cellular response to organonitrogen compound (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); COVID-19 (ortholog); FOUND IN asymmetric synapse (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: A-kinase anchor protein 5
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1838,891,637 - 38,902,390 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl838,896,840 - 38,898,126 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha838,581,009 - 38,593,805 (+)NCBI
ROS_Cfam_1.0839,110,721 - 39,123,499 (+)NCBI
UMICH_Zoey_3.1838,732,786 - 38,745,581 (+)NCBI
UNSW_CanFamBas_1.0838,804,178 - 38,816,968 (+)NCBI
UU_Cfam_GSD_1.0839,164,258 - 39,177,033 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
AKAP5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1838,891,637 - 38,902,390 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl838,896,840 - 38,898,126 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha838,581,009 - 38,593,805 (+)NCBI
ROS_Cfam_1.0839,110,721 - 39,123,499 (+)NCBI
UMICH_Zoey_3.1838,732,786 - 38,745,581 (+)NCBI
UNSW_CanFamBas_1.0838,804,178 - 38,816,968 (+)NCBI
UU_Cfam_GSD_1.0839,164,258 - 39,177,033 (+)NCBI
AKAP5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1464,465,499 - 64,474,503 (+)EnsemblGRCh38hg38GRCh38
GRCh381464,465,499 - 64,474,503 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371464,932,217 - 64,941,221 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361464,001,970 - 64,010,974 (+)NCBINCBI36hg18NCBI36
Build 341464,003,577 - 64,006,172NCBI
Celera1444,989,946 - 44,998,950 (+)NCBI
Cytogenetic Map14q23.3ENTREZGENE
HuRef1445,104,846 - 45,113,850 (+)NCBIHuRef
CHM1_11464,871,930 - 64,880,934 (+)NCBICHM1_1
Akap5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391276,371,652 - 76,380,925 (+)NCBIGRCm39mm39
GRCm39 Ensembl1276,371,665 - 76,380,927 (+)Ensembl
GRCm381276,324,617 - 76,334,517 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1276,324,891 - 76,334,153 (+)EnsemblGRCm38mm10GRCm38
MGSCv371277,425,878 - 77,435,138 (+)NCBIGRCm37mm9NCBIm37
MGSCv361277,246,657 - 77,249,859 (+)NCBImm8
Celera1277,415,834 - 77,425,026 (+)NCBICelera
Cytogenetic Map12C3NCBI
Akap5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2695,051,527 - 95,061,075 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl695,051,537 - 95,061,578 (+)Ensembl
Rnor_6.0699,356,509 - 99,361,909 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl699,356,509 - 99,361,909 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06108,768,060 - 108,773,460 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4698,923,105 - 98,928,505 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1698,926,570 - 98,931,955 (+)NCBI
Celera693,476,351 - 93,481,725 (+)NCBICelera
Cytogenetic Map6q24NCBI
Akap5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554665,411,650 - 5,412,960 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554665,411,190 - 5,422,043 (-)NCBIChiLan1.0ChiLan1.0
AKAP5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11463,299,369 - 63,303,516 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1463,302,200 - 63,303,483 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01445,045,476 - 45,050,946 (+)NCBIMhudiblu_PPA_v0panPan3
Akap5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864066,010,194 - 66,018,254 (-)NCBI
SpeTri2.0NW_0049364958,173,521 - 8,179,249 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AKAP5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl788,538,983 - 88,547,394 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1788,538,938 - 88,544,330 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2794,900,300 - 94,905,924 (+)NCBISscrofa10.2Sscrofa10.2susScr3
AKAP5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12441,669,206 - 41,678,205 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2441,672,098 - 41,673,381 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605329,846,241 - 29,855,447 (+)NCBIVero_WHO_p1.0
Akap5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473436,550,020 - 36,555,142 (-)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium
Low 4 7 6 3 12 6 6
Below cutoff 1 5 15 6 6 3 6 8 4

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005623493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544929 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038589219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038589230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038589234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038609048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000025424   ⟹   ENSCAFP00000023607
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl838,896,840 - 38,898,126 (+)Ensembl
RefSeq Acc Id: XM_005623493   ⟹   XP_005623550
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1838,891,637 - 38,902,390 (+)NCBI
Dog10K_Boxer_Tasha838,581,009 - 38,593,803 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038483469   ⟹   XP_038339397
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1838,732,786 - 38,745,579 (+)NCBI
RefSeq Acc Id: XM_038483470   ⟹   XP_038339398
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1838,737,692 - 38,745,581 (+)NCBI
RefSeq Acc Id: XM_038483471   ⟹   XP_038339399
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1838,737,493 - 38,745,581 (+)NCBI
RefSeq Acc Id: XM_038483472   ⟹   XP_038339400
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1838,737,692 - 38,745,581 (+)NCBI
RefSeq Acc Id: XM_038544929   ⟹   XP_038400857
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0839,164,258 - 39,177,031 (+)NCBI
RefSeq Acc Id: XM_038544930   ⟹   XP_038400858
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0839,169,139 - 39,177,033 (+)NCBI
RefSeq Acc Id: XM_038544931   ⟹   XP_038400859
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0839,168,941 - 39,177,033 (+)NCBI
RefSeq Acc Id: XM_038544932   ⟹   XP_038400860
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0839,169,139 - 39,177,033 (+)NCBI
RefSeq Acc Id: XM_038589219   ⟹   XP_038445147
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha838,585,912 - 38,593,805 (+)NCBI
RefSeq Acc Id: XM_038589230   ⟹   XP_038445158
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha838,585,712 - 38,593,805 (+)NCBI
RefSeq Acc Id: XM_038589234   ⟹   XP_038445162
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha838,585,912 - 38,593,805 (+)NCBI
RefSeq Acc Id: XM_038609045   ⟹   XP_038464973
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0838,804,178 - 38,816,966 (+)NCBI
RefSeq Acc Id: XM_038609046   ⟹   XP_038464974
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0838,809,079 - 38,816,968 (+)NCBI
RefSeq Acc Id: XM_038609047   ⟹   XP_038464975
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0838,808,880 - 38,816,968 (+)NCBI
RefSeq Acc Id: XM_038609048   ⟹   XP_038464976
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0838,809,079 - 38,816,968 (+)NCBI
RefSeq Acc Id: XM_038673851   ⟹   XP_038529779
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0839,110,721 - 39,123,497 (+)NCBI
RefSeq Acc Id: XM_038673852   ⟹   XP_038529780
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0839,115,602 - 39,123,499 (+)NCBI
RefSeq Acc Id: XM_038673854   ⟹   XP_038529782
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0839,115,404 - 39,123,499 (+)NCBI
RefSeq Acc Id: XM_038673855   ⟹   XP_038529783
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0839,115,602 - 39,123,499 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_005623550   ⟸   XM_005623493
- UniProtKB: E2QXA1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000023607   ⟸   ENSCAFT00000025424
RefSeq Acc Id: XP_038339397   ⟸   XM_038483469
RefSeq Acc Id: XP_038339399   ⟸   XM_038483471
RefSeq Acc Id: XP_038339398   ⟸   XM_038483470
RefSeq Acc Id: XP_038339400   ⟸   XM_038483472
RefSeq Acc Id: XP_038464973   ⟸   XM_038609045
RefSeq Acc Id: XP_038464975   ⟸   XM_038609047
RefSeq Acc Id: XP_038464974   ⟸   XM_038609046
RefSeq Acc Id: XP_038464976   ⟸   XM_038609048
RefSeq Acc Id: XP_038529779   ⟸   XM_038673851
RefSeq Acc Id: XP_038529782   ⟸   XM_038673854
RefSeq Acc Id: XP_038529780   ⟸   XM_038673852
RefSeq Acc Id: XP_038529783   ⟸   XM_038673855
RefSeq Acc Id: XP_038445158   ⟸   XM_038589230
RefSeq Acc Id: XP_038445147   ⟸   XM_038589219
RefSeq Acc Id: XP_038445162   ⟸   XM_038589234
RefSeq Acc Id: XP_038400857   ⟸   XM_038544929
RefSeq Acc Id: XP_038400859   ⟸   XM_038544931
RefSeq Acc Id: XP_038400858   ⟸   XM_038544930
RefSeq Acc Id: XP_038400860   ⟸   XM_038544932


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000016026 Ensembl
NCBI Gene AKAP5 ENTREZGENE
UniProt E2QXA1 ENTREZGENE
VGNC ID VGNC:37758 ENTREZGENE