ACSL1 (acyl-CoA synthetase long chain family member 1) - Rat Genome Database

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Gene: ACSL1 (acyl-CoA synthetase long chain family member 1) Canis lupus familiaris
Analyze
Symbol: ACSL1
Name: acyl-CoA synthetase long chain family member 1
RGD ID: 12123831
Description: ENCODES a protein that exhibits long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); phytanate-CoA ligase activity (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); fatty acid metabolic process (ortholog); fatty acid transport (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine palmitoyltransferase I deficiency pathway; carnitine-acylcarnitine translocase deficiency; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: acyl-CoA synthetase long-chain family member 1; long-chain-fatty-acid--CoA ligase 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11645,735,675 - 45,806,235 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1645,735,703 - 45,804,970 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1646,229,060 - 46,299,523 (+)NCBI
ROS_Cfam_1.01647,951,751 - 48,022,201 (+)NCBI
ROS_Cfam_1.0 Ensembl1647,951,663 - 48,216,959 (+)Ensembl
UMICH_Zoey_3.11645,918,792 - 45,989,322 (+)NCBI
UNSW_CanFamBas_1.01646,531,804 - 46,602,185 (+)NCBI
UU_Cfam_GSD_1.01646,664,118 - 46,734,659 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
ACSL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11645,735,675 - 45,806,235 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1645,735,703 - 45,804,970 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1646,229,060 - 46,299,523 (+)NCBI
ROS_Cfam_1.01647,951,751 - 48,022,201 (+)NCBI
ROS_Cfam_1.0 Ensembl1647,951,663 - 48,216,959 (+)Ensembl
UMICH_Zoey_3.11645,918,792 - 45,989,322 (+)NCBI
UNSW_CanFamBas_1.01646,531,804 - 46,602,185 (+)NCBI
UU_Cfam_GSD_1.01646,664,118 - 46,734,659 (+)NCBI
ACSL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384184,755,595 - 184,826,594 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl4184,755,595 - 184,826,818 (-)EnsemblGRCh38hg38GRCh38
GRCh374185,676,749 - 185,747,122 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364185,913,743 - 185,984,209 (-)NCBINCBI36hg18NCBI36
Build 344186,051,898 - 186,122,364NCBI
Celera4183,005,275 - 183,075,742 (-)NCBI
Cytogenetic Map4q35.1NCBI
HuRef4181,430,075 - 181,478,058 (-)NCBIHuRef
CHM1_14185,652,944 - 185,723,638 (-)NCBICHM1_1
T2T-CHM13v2.04188,099,036 - 188,169,396 (-)NCBI
Acsl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39846,924,074 - 46,989,088 (+)NCBIGRCm39mm39
GRCm39 Ensembl846,924,074 - 46,989,088 (+)Ensembl
GRCm38846,471,037 - 46,536,051 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl846,471,037 - 46,536,051 (+)EnsemblGRCm38mm10GRCm38
MGSCv37847,556,396 - 47,621,404 (+)NCBIGRCm37mm9NCBIm37
MGSCv36847,969,859 - 48,034,867 (+)NCBImm8
Celera849,153,706 - 49,218,586 (+)NCBICelera
Cytogenetic Map8B1.1NCBI
Acsl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21645,755,246 - 45,821,541 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1645,755,254 - 45,821,541 (-)Ensembl
Rnor_6.01648,937,456 - 49,003,898 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1648,937,456 - 49,003,246 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01648,653,023 - 48,719,250 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41649,036,892 - 49,081,416 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11649,036,966 - 49,081,491 (-)NCBI
Celera1643,758,263 - 43,802,634 (-)NCBICelera
Cytogenetic Map16q11NCBI
Acsl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540324,190,674 - 24,236,780 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540324,190,674 - 24,235,354 (+)NCBIChiLan1.0ChiLan1.0
ACSL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14189,145,403 - 189,216,458 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4189,145,403 - 189,198,646 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v04176,920,811 - 176,991,495 (-)NCBIMhudiblu_PPA_v0panPan3
Acsl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494333,625,129 - 33,684,355 (-)NCBI
SpeTri2.0NW_0049365544,425,518 - 4,484,853 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACSL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1545,866,857 - 45,963,729 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11545,866,858 - 45,936,327 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21552,526,606 - 52,595,992 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACSL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17130,712,633 - 130,783,360 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl7130,712,308 - 130,763,756 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037110,965,130 - 111,036,287 (-)NCBIVero_WHO_p1.0
Acsl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476915,503,757 - 15,584,777 (-)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_00462476915,503,757 - 15,584,741 (-)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 4 5 22 6 6 6 6 6 12 8 10 6
Low 1
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005629987 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022404231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022404232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022404233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022404234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038452300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038452301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497931 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038497936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560404 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560407 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038560409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624460 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038624461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038690218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038690219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038690220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038690221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038690222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038690223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000012314   ⟹   ENSCAFP00000011415
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,735,703 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000064807   ⟹   ENSCAFP00000056381
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,735,703 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000068275   ⟹   ENSCAFP00000052202
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,757,314 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000070086   ⟹   ENSCAFP00000050622
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,735,703 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000072503   ⟹   ENSCAFP00000056847
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,735,703 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000089470   ⟹   ENSCAFP00000051140
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,757,314 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000089501   ⟹   ENSCAFP00000058593
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1645,757,314 - 45,804,970 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845041142   ⟹   ENSCAFP00845032245
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,951,663 - 48,022,186 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845041349   ⟹   ENSCAFP00845032417
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,951,663 - 48,022,186 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845041543   ⟹   ENSCAFP00845032570
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,951,663 - 48,022,186 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845041705   ⟹   ENSCAFP00845032706
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,951,663 - 48,022,186 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845041802   ⟹   ENSCAFP00845032791
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,951,691 - 48,022,196 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845041906   ⟹   ENSCAFP00845032867
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,972,358 - 48,022,190 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042045   ⟹   ENSCAFP00845032977
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,973,685 - 48,216,959 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845042243   ⟹   ENSCAFP00845033122
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1647,973,685 - 48,021,747 (+)Ensembl
RefSeq Acc Id: XM_005629987   ⟹   XP_005630044
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11645,735,675 - 45,806,235 (+)NCBI
Dog10K_Boxer_Tasha1646,229,060 - 46,299,523 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022404231   ⟹   XP_022259939
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11645,758,267 - 45,806,235 (+)NCBI
Dog10K_Boxer_Tasha1646,251,107 - 46,299,523 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022404232   ⟹   XP_022259940
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11645,756,281 - 45,806,235 (+)NCBI
Dog10K_Boxer_Tasha1646,249,622 - 46,299,523 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022404234   ⟹   XP_022259942
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11645,753,157 - 45,806,235 (+)NCBI
Dog10K_Boxer_Tasha1646,246,509 - 46,299,523 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038452300   ⟹   XP_038308228
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1646,251,107 - 46,299,523 (+)NCBI
RefSeq Acc Id: XM_038452301   ⟹   XP_038308229
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1646,251,107 - 46,299,523 (+)NCBI
RefSeq Acc Id: XM_038497931   ⟹   XP_038353859
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11645,940,911 - 45,989,322 (+)NCBI
RefSeq Acc Id: XM_038497932   ⟹   XP_038353860
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11645,940,911 - 45,989,322 (+)NCBI
RefSeq Acc Id: XM_038497933   ⟹   XP_038353861
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11645,918,792 - 45,989,322 (+)NCBI
RefSeq Acc Id: XM_038497934   ⟹   XP_038353862
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11645,939,423 - 45,989,322 (+)NCBI
RefSeq Acc Id: XM_038497935   ⟹   XP_038353863
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11645,936,311 - 45,989,322 (+)NCBI
RefSeq Acc Id: XM_038497936   ⟹   XP_038353864
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11645,940,911 - 45,989,322 (+)NCBI
RefSeq Acc Id: XM_038560404   ⟹   XP_038416332
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01646,686,238 - 46,734,659 (+)NCBI
RefSeq Acc Id: XM_038560405   ⟹   XP_038416333
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01646,686,238 - 46,734,659 (+)NCBI
RefSeq Acc Id: XM_038560406   ⟹   XP_038416334
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01646,664,118 - 46,734,659 (+)NCBI
RefSeq Acc Id: XM_038560407   ⟹   XP_038416335
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01646,684,748 - 46,734,659 (+)NCBI
RefSeq Acc Id: XM_038560408   ⟹   XP_038416336
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01646,681,636 - 46,734,659 (+)NCBI
RefSeq Acc Id: XM_038560409   ⟹   XP_038416337
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01646,686,238 - 46,734,659 (+)NCBI
RefSeq Acc Id: XM_038624455   ⟹   XP_038480383
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01646,553,792 - 46,602,185 (+)NCBI
RefSeq Acc Id: XM_038624456   ⟹   XP_038480384
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01646,553,792 - 46,602,185 (+)NCBI
RefSeq Acc Id: XM_038624457   ⟹   XP_038480385
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01646,531,804 - 46,602,185 (+)NCBI
RefSeq Acc Id: XM_038624459   ⟹   XP_038480387
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01646,552,314 - 46,602,185 (+)NCBI
RefSeq Acc Id: XM_038624460   ⟹   XP_038480388
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01646,549,202 - 46,602,185 (+)NCBI
RefSeq Acc Id: XM_038624461   ⟹   XP_038480389
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01646,553,792 - 46,602,185 (+)NCBI
RefSeq Acc Id: XM_038690218   ⟹   XP_038546146
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01647,973,769 - 48,022,201 (+)NCBI
RefSeq Acc Id: XM_038690219   ⟹   XP_038546147
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01647,973,769 - 48,022,201 (+)NCBI
RefSeq Acc Id: XM_038690220   ⟹   XP_038546148
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01647,951,751 - 48,022,201 (+)NCBI
RefSeq Acc Id: XM_038690221   ⟹   XP_038546149
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01647,972,262 - 48,022,201 (+)NCBI
RefSeq Acc Id: XM_038690222   ⟹   XP_038546150
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01647,969,150 - 48,022,201 (+)NCBI
RefSeq Acc Id: XM_038690223   ⟹   XP_038546151
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01647,973,769 - 48,022,201 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005630044 (Get FASTA)   NCBI Sequence Viewer  
  XP_022259939 (Get FASTA)   NCBI Sequence Viewer  
  XP_022259940 (Get FASTA)   NCBI Sequence Viewer  
  XP_022259942 (Get FASTA)   NCBI Sequence Viewer  
  XP_038308228 (Get FASTA)   NCBI Sequence Viewer  
  XP_038308229 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353859 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353860 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353861 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353862 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353863 (Get FASTA)   NCBI Sequence Viewer  
  XP_038353864 (Get FASTA)   NCBI Sequence Viewer  
  XP_038416332 (Get FASTA)   NCBI Sequence Viewer  
  XP_038416333 (Get FASTA)   NCBI Sequence Viewer  
  XP_038416334 (Get FASTA)   NCBI Sequence Viewer  
  XP_038416335 (Get FASTA)   NCBI Sequence Viewer  
  XP_038416336 (Get FASTA)   NCBI Sequence Viewer  
  XP_038416337 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480383 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480384 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480385 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480387 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480388 (Get FASTA)   NCBI Sequence Viewer  
  XP_038480389 (Get FASTA)   NCBI Sequence Viewer  
  XP_038546146 (Get FASTA)   NCBI Sequence Viewer  
  XP_038546147 (Get FASTA)   NCBI Sequence Viewer  
  XP_038546148 (Get FASTA)   NCBI Sequence Viewer  
  XP_038546149 (Get FASTA)   NCBI Sequence Viewer  
  XP_038546150 (Get FASTA)   NCBI Sequence Viewer  
  XP_038546151 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005630044   ⟸   XM_005629987
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022259942   ⟸   XM_022404234
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022259940   ⟸   XM_022404232
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_022259939   ⟸   XM_022404231
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSCAFP00000056381   ⟸   ENSCAFT00000064807
RefSeq Acc Id: ENSCAFP00000050622   ⟸   ENSCAFT00000070086
RefSeq Acc Id: ENSCAFP00000052202   ⟸   ENSCAFT00000068275
RefSeq Acc Id: ENSCAFP00000056847   ⟸   ENSCAFT00000072503
RefSeq Acc Id: ENSCAFP00000058593   ⟸   ENSCAFT00000089501
RefSeq Acc Id: ENSCAFP00000051140   ⟸   ENSCAFT00000089470
RefSeq Acc Id: ENSCAFP00000011415   ⟸   ENSCAFT00000012314
RefSeq Acc Id: XP_038353861   ⟸   XM_038497933
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038353863   ⟸   XM_038497935
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038353862   ⟸   XM_038497934
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038353859   ⟸   XM_038497931
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038353860   ⟸   XM_038497932
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038353864   ⟸   XM_038497936
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038480385   ⟸   XM_038624457
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038480388   ⟸   XM_038624460
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038480387   ⟸   XM_038624459
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038480383   ⟸   XM_038624455
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038480384   ⟸   XM_038624456
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038480389   ⟸   XM_038624461
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038546148   ⟸   XM_038690220
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038546150   ⟸   XM_038690222
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038546149   ⟸   XM_038690221
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038546146   ⟸   XM_038690218
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038546147   ⟸   XM_038690219
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038546151   ⟸   XM_038690223
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038308228   ⟸   XM_038452300
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038308229   ⟸   XM_038452301
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038416334   ⟸   XM_038560406
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038416336   ⟸   XM_038560408
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038416335   ⟸   XM_038560407
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038416332   ⟸   XM_038560404
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038416333   ⟸   XM_038560405
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038416337   ⟸   XM_038560409
- Peptide Label: isoform X3
RefSeq Acc Id: ENSCAFP00845032570   ⟸   ENSCAFT00845041543
RefSeq Acc Id: ENSCAFP00845032417   ⟸   ENSCAFT00845041349
RefSeq Acc Id: ENSCAFP00845033122   ⟸   ENSCAFT00845042243
RefSeq Acc Id: ENSCAFP00845032867   ⟸   ENSCAFT00845041906
RefSeq Acc Id: ENSCAFP00845032245   ⟸   ENSCAFT00845041142
RefSeq Acc Id: ENSCAFP00845032791   ⟸   ENSCAFT00845041802
RefSeq Acc Id: ENSCAFP00845032706   ⟸   ENSCAFT00845041705
RefSeq Acc Id: ENSCAFP00845032977   ⟸   ENSCAFT00845042045
Protein Domains
AMP-binding   AMP-binding_C

Promoters
RGD ID:13686135
Promoter ID:EPDNEW_C4203
Type:single initiation site
Name:ACSL1_1
Description:acyl-CoA synthetase long chain family member 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11645,735,771 - 45,735,831EPDNEW
Damaging Variants


Assembly: CanFam3.1

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain
16 45797752 45797753 G C snv Chihuahua (CH019)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000007662 Ensembl
  ENSCAFG00845023265 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCAFP00845032245.1 UniProtKB/TrEMBL
  ENSCAFP00845032417 ENTREZGENE
  ENSCAFP00845032417.1 UniProtKB/TrEMBL
  ENSCAFP00845032570 ENTREZGENE
  ENSCAFP00845032570.1 UniProtKB/TrEMBL
  ENSCAFP00845032706.1 UniProtKB/TrEMBL
  ENSCAFP00845032791.1 UniProtKB/TrEMBL
  ENSCAFP00845032867 ENTREZGENE
  ENSCAFP00845032867.1 UniProtKB/TrEMBL
  ENSCAFP00845032977 ENTREZGENE
  ENSCAFP00845032977.1 UniProtKB/TrEMBL
  ENSCAFP00845033122 ENTREZGENE
  ENSCAFP00845033122.1 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00845041142.1 UniProtKB/TrEMBL
  ENSCAFT00845041349 ENTREZGENE
  ENSCAFT00845041349.1 UniProtKB/TrEMBL
  ENSCAFT00845041543 ENTREZGENE
  ENSCAFT00845041543.1 UniProtKB/TrEMBL
  ENSCAFT00845041705.1 UniProtKB/TrEMBL
  ENSCAFT00845041802.1 UniProtKB/TrEMBL
  ENSCAFT00845041906 ENTREZGENE
  ENSCAFT00845041906.1 UniProtKB/TrEMBL
  ENSCAFT00845042045 ENTREZGENE
  ENSCAFT00845042045.1 UniProtKB/TrEMBL
  ENSCAFT00845042243 ENTREZGENE
  ENSCAFT00845042243.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.12780 UniProtKB/TrEMBL
InterPro AMP-bd_C UniProtKB/TrEMBL
  AMP-binding_CS UniProtKB/TrEMBL
  AMP-dep_Synth/Lig UniProtKB/TrEMBL
  ANL_N_sf UniProtKB/TrEMBL
  LC-FACS_euk UniProtKB/TrEMBL
NCBI Gene ACSL1 ENTREZGENE
Pfam AMP-binding UniProtKB/TrEMBL
  AMP-binding_C UniProtKB/TrEMBL
PROSITE AMP_BINDING UniProtKB/TrEMBL
UniProt A0A8I3PFJ0_CANLF UniProtKB/TrEMBL
  A0A8I3PFX3_CANLF UniProtKB/TrEMBL
  A0A8I3PHY8_CANLF UniProtKB/TrEMBL
  A0A8I3PIC2_CANLF UniProtKB/TrEMBL
  A0A8I3PJV9_CANLF UniProtKB/TrEMBL
  A0A8I3PNZ9_CANLF UniProtKB/TrEMBL
  A0A8I3PP81_CANLF UniProtKB/TrEMBL
  A0A8I3S3P5_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:37532 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-06-20 ACSL1  acyl-CoA synthetase long chain family member 1    acyl-CoA synthetase long-chain family member 1  Symbol and/or name change 5135510 APPROVED