SLC30A2 (solute carrier family 30 member 2)

Gene: SLC30A2 (solute carrier family 30 member 2) Canis lupus familiaris

Analyze

Symbol:

SLC30A2

Name:

solute carrier family 30 member 2

RGD ID:

12123016

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); zinc ion transmembrane transporter activity (ortholog); zinc:proton antiporter activity (ortholog); INVOLVED IN intracellular zinc ion homeostasis (ortholog); zinc export across plasma membrane (ortholog); zinc ion import into lysosome (ortholog); ASSOCIATED WITH autosomal recessive hypercholesterolemia (ortholog); genetic disease (ortholog); Neonatal Zinc Deficiency due to Low Breast Milk Zinc (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); intracellular membrane-bounded organelle (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

zinc transporter 2

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	73,922,443 - 73,929,924 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	73,921,878 - 73,928,874 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	70,498,812 - 70,506,207 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	74,485,426 - 74,492,825 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	74,484,778 - 74,491,775 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	71,309,034 - 71,316,428 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	72,315,360 - 72,322,755 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	73,319,147 - 73,326,547 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive hypercholesterolemia (ISO)

genetic disease (ISO)

Neonatal Zinc Deficiency due to Low Breast Milk Zinc (ISO)

prostate cancer (ISO)

retinitis pigmentosa 59 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

intracellular zinc ion homeostasis (ISO)

monoatomic cation transport (IEA)

response to zinc ion (IEA)

transmembrane transport (IEA)

zinc export across plasma membrane (ISO)

zinc ion import into lysosome (ISO)

zinc ion import into mitochondrion (ISO)

zinc ion import into organelle (ISO)

zinc ion import into secretory vesicle (ISO)

zinc ion import into zymogen granule (ISO)

zinc ion transmembrane transport (IEA)

zinc ion transport (ISO)

Cellular Component

cytoplasm (ISO)

endosome membrane (ISO)

intracellular membrane-bounded organelle (ISO)

late endosome (ISO)

lysosomal membrane (ISO)

membrane (IEA)

mitochondrial inner membrane (ISO)

plasma membrane (IEA)

secretory vesicle (ISO)

zymogen granule membrane (ISO)

Molecular Function

antiporter activity (IEA)

identical protein binding (ISO)

monoatomic cation transmembrane transporter activity (IEA)

protein binding (ISO)

zinc ion transmembrane transporter activity (IEA,ISO)

zinc:proton antiporter activity (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

SLC30A2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	2	73,922,443 - 73,929,924 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	2	73,921,878 - 73,928,874 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	2	70,498,812 - 70,506,207 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	2	74,485,426 - 74,492,825 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	2	74,484,778 - 74,491,775 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	2	71,309,034 - 71,316,428 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	2	72,315,360 - 72,322,755 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	2	73,319,147 - 73,326,547 (+)	NCBI		UU_Cfam_GSD_1.0

SLC30A2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	26,037,252 - 26,046,118 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	26,037,252 - 26,046,118 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	26,363,743 - 26,372,609 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	26,237,101 - 26,245,191 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	26,048,655 - 26,056,746	NCBI
Celera	1	24,761,192 - 24,769,282 (-)	NCBI		Celera
Cytogenetic Map	1	p36.11	NCBI
HuRef	1	24,618,624 - 24,626,717 (-)	NCBI		HuRef
CHM1_1	1	26,477,743 - 26,485,833 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	25,874,654 - 25,883,519 (-)	NCBI		T2T-CHM13v2.0

Slc30a2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	134,070,357 - 134,081,795 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	134,070,492 - 134,081,795 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	134,343,046 - 134,354,484 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	134,343,181 - 134,354,484 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	133,898,985 - 133,908,580 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	133,615,122 - 133,625,270 (+)	NCBI		MGSCv36	mm8
MGSCv36	4	131,918,527 - 131,928,675 (+)	NCBI		MGSCv36	mm8
Celera	4	132,522,807 - 132,532,421 (+)	NCBI		Celera
Cytogenetic Map	4	D2.3	NCBI
cM Map	4	66.61	NCBI

Slc30a2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	151,843,451 - 151,855,674 (+)	NCBI		GRCr8
mRatBN7.2	5	146,559,733 - 146,571,957 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	146,559,733 - 146,571,956 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	149,261,093 - 149,273,806 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	151,031,874 - 151,044,095 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	151,017,317 - 151,030,034 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	152,559,577 - 152,571,800 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	152,559,577 - 152,571,799 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	156,356,502 - 156,368,725 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	153,086,346 - 153,098,569 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	153,097,114 - 153,107,129 (+)	NCBI
Celera	5	144,977,168 - 144,989,389 (+)	NCBI		Celera
Cytogenetic Map	5	q36	NCBI

Slc30a2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955452	5,504,022 - 5,516,246 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955452	5,507,614 - 5,515,669 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC30A2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	200,828,094 - 200,836,275 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	199,926,146 - 199,934,081 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	25,296,643 - 25,304,751 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	26,362,678 - 26,370,803 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	26,359,575 - 26,370,803 (-)	Ensembl	panpan1.1		panPan2

Slc30a2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	44,756,722 - 44,764,976 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	10,581,480 - 10,589,442 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	10,581,504 - 10,589,364 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC30A2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	83,477,759 - 83,484,688 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	83,478,761 - 83,484,876 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	77,113,410 - 77,122,493 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC30A2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	106,722,539 - 106,731,494 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	106,724,256 - 106,731,955 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	9,686,150 - 9,695,043 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc30a2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624764	10,110,740 - 10,120,093 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624764	10,104,622 - 10,119,953 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in SLC30A2
87 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			10								5
Low	4		2	1		1			7	8	5
Below cutoff	1	5	10	5	6	5	6	6	5			6

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038470646	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038531507	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038595727	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038659811	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_535347	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000034	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000373	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000020143 ⟹ ENSCAFP00000018683

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	73,922,520 - 73,928,874 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000048920 ⟹ ENSCAFP00000039147

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	73,921,878 - 73,927,167 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000068271 ⟹ ENSCAFP00000056768

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	2	73,922,520 - 73,928,874 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845023569 ⟹ ENSCAFP00845018505

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	2	74,484,778 - 74,490,068 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845023595 ⟹ ENSCAFP00845018518

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	2	74,485,420 - 74,491,775 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845023631 ⟹ ENSCAFP00845018548

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	2	74,485,420 - 74,491,775 (+)	Ensembl

RefSeq Acc Id:

XM_038470646 ⟹ XP_038326574

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	2	71,309,034 - 71,316,428 (+)	NCBI

RefSeq Acc Id:

XM_038531507 ⟹ XP_038387435

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	2	73,319,147 - 73,326,547 (+)	NCBI

RefSeq Acc Id:

XM_038595727 ⟹ XP_038451655

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	2	72,315,360 - 72,322,755 (+)	NCBI

RefSeq Acc Id:

XM_038659811 ⟹ XP_038515739

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	2	74,485,426 - 74,492,825 (+)	NCBI

RefSeq Acc Id:

XM_535347 ⟹ XP_535347

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	73,922,443 - 73,929,924 (+)	NCBI
Dog10K_Boxer_Tasha	2	70,498,812 - 70,506,207 (+)	NCBI

Sequence:

show sequence

CGGCGGCGGGAAGCAGCGGGCGGGCGGGCGGCGAGCGGGGCCCTCCCGGCAGGTGGGTGCGCGC
TGCGCGGGGGCCCGCCCGCAACTCCCAGGGCGCACGGGACGCGGCGGCGGCGCGCGGCTGCCCG
GACCCCGCGGGGGCGGCCCGGGCCGCATGGAGCCCACGGAGAAGCAGCACCTGGTGGACACCAA
GTCCGGAACCCGGTCTTACACGGGATCTCTGTGGCAGGAGGGGACTGGCTGGATCCCTCTGCCC
TCACCTGGCCTGGACTTGCAGGCCATTGAGTTAGTCGCTGAGAGTAACCATTACTGTCATGCCC
AGAAGGGTCCTGCCAGTCACCTCGAGCCCAAGAAGGAGCGGGCCCGGCGACAGCTTTATGTGGC
CTCTGCCATCTGCCTGGTGTTCATGATTGGGGAAATCGTTGGTGGGTACCTAGCTCACAGCTTG
GCAATCATGACCGACGCAGCCCACCTGCTCACCGATTTTGCCAGCATGCTCGTCAGTCTCTTTT
CTCTCTGGATGTCCTCCCGACCAGCCACCAAGACTATGAACTTTGGCTGGCAGCGAGCTGAGAT
CCTGGGAGCCCTGCTCTCTGTACTGTCCATCTGGGTCGTGACTGGAGTGCTGGTGTTCCTGGCA
GTGGAGCGGCTAATCTCTGGGGACTATGAGATCGAAGGGGGGACCATGCTGATCACATCGGGCT
GTGCTGTGGCCGTGAATATCATAATGGGGTTGACTCTTCATCAGTCTAGCCACGGGCACAGCCA
TGACTCCAGCCAGCAGCAGGAGAACCCCAGTGTGCGAGCTGCATTTATCCATGTGATTGGAGAC
TTTCTGCAGAGTGTAGGCATCTTGGTGGCAGCCTATATTTTGTACTTCAAGCCAGAGTACAAGT
ATGTAGACCCCATCTGCACCTTCCTCTTCTCCATCCTGGTCTTGGGGACGACTTTGACCATCCT
GAGAGACGTGATCGTGGTGCTGATGGAAGGGACCCCCAAGGGTGTGGACTTCACGGCCGTTCGG
GATCTGCTACTGTCGGTCGAAGGGGTGGAAGCCTTGCACAGCCTGCACATTTGGGCACTGACCG
TGACCCAGCCTGTGCTGTCTGTCCATATCGCCATCGCTCAGAATGCAGATGGCCAGGCTGTGCT
GAAGGCAGCCAGCACCCGCCTACAGGGAAAGTTCCGCTTCCACACCATCACCATCCAGATCGAA
GACTACTCTGAGGACATGAAGGACTGTCAGGAGTGCCAAGGCCCCTCCGACTGACTACTTGGCC
AAGTGCTAGCTGAGGCTTGGACAGGACCTGCAGGTGGTGGGGCTAAGTGTCCCCCAGGCCCGGC
TGTGTTATAAAGCAGCTCCCTCTCCCGACCTCTGCTCTGTGTTCGGTGTGAAGGAACTGCCCCC
TGCCTCCCCCATCTGACTATTGCCAGTTTAAGGCTGGAGACTCCGCAAGTGTAAAAAGCTGGTA
TGACCCCGCTCCTGCAGCTTCTGGTGCCTGGCAGGGCTGGGTTTGGGCCTAATCTTCAGCTAAT
GCTTTCTTGCCACCAGCCTCAGGAAAGACAGTGAGGCCCAGTGACGGGTGGCCGAGGGGAGACT
GGTTTCAGGGTCCCCTTGCCCACCTGCCCAAGTCCTCATTTCAGTCTGCCTGGCTTGTACCTCA
TGAATCTATGAAGAAGCCCTGGGACAGAGTTTCTCCCTCTGCCTATAACAATATGGTTTAAGGA
GTCCTTGGGGGTTGGGAGTTGTGAGGATCTGCACTGTCCAACCTGTCCCCCTGAGATGGGAAAC
CAGTGGGCACCCAAGGCCTGTCTGTGCCTTAGTCACTTCAGCTATGAGCCACACATTTCCCTTT
CTTGGAGGGAGGAGGCTTGTCACCACCTAGCACCCAGCTGGTTTCTTCTTTCCTTATTCCCCCA
GCCCAGGAAACTTGTGCTGACACCATGATGCCTTTGCCACAGGTGGTGGGGGTGAGGGCAGAGA
TTTTAGCTCGGGTCCTGCCTTAACGGGCCACACAGCCCCAGGCCCACTTCTCTTGCCCCGATAG
AGTCCCAGGGACCTCAGAAACTGAAATCTGATGTGATTGGGCCAGCTCTGCTGCCAATGTAGCT
CGATCTGCTCAAAACTTGAGGATGGACGATGAAGAGGAATTGGTTGTACAATGAATGGGTGGGA
GACGCTGGCTTCCTGAGGTGTATGTAGATTCCTGACTTAGGGGCAGCTTGTGTTTATGAGATGA
AGAGGGGAGACTTGTCCCTAGTCTCAGAGAAGGCAGCACATCCACTCATTAGGTAGCCCTGGTC
TTTGCTAGCAAGTGTCCTTAGGTCTCATCAGAGAATGAGAGACCAAGGATGAACCCACCTCACA
GGGTTGTTGTGAGGACTGGAGCCAAAGCCTATCAAGCTCCTGGTGTTGCTTGAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038326574	(Get FASTA)	NCBI Sequence Viewer
	XP_038387435	(Get FASTA)	NCBI Sequence Viewer
	XP_038451655	(Get FASTA)	NCBI Sequence Viewer
	XP_038515739	(Get FASTA)	NCBI Sequence Viewer
	XP_535347	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000018683.3
	ENSCAFP00000039147.3
	ENSCAFP00000056768.1
	ENSCAFP00030025405.1
	ENSCAFP00030025470.1
	ENSCAFP00040009247.1
	ENSCAFP00845018505.1
	ENSCAFP00845018518
	ENSCAFP00845018518.1
	ENSCAFP00845018548.1

RefSeq Acc Id:

XP_535347 ⟸ XM_535347

- UniProtKB:

A0A8C0NJA6 (UniProtKB/TrEMBL), A0A8C0R559 (UniProtKB/TrEMBL), A0A8I3NLD3 (UniProtKB/TrEMBL), A0A8C0LAC9 (UniProtKB/TrEMBL), A0A8C0QA92 (UniProtKB/TrEMBL), A0A8I3NPH7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEPTEKQHLVDTKSGTRSYTGSLWQEGTGWIPLPSPGLDLQAIELVAESNHYCHAQKGPASHLE
PKKERARRQLYVASAICLVFMIGEIVGGYLAHSLAIMTDAAHLLTDFASMLVSLFSLWMSSRPA
TKTMNFGWQRAEILGALLSVLSIWVVTGVLVFLAVERLISGDYEIEGGTMLITSGCAVAVNIIM
GLTLHQSSHGHSHDSSQQQENPSVRAAFIHVIGDFLQSVGILVAAYILYFKPEYKYVDPICTFL
FSILVLGTTLTILRDVIVVLMEGTPKGVDFTAVRDLLLSVEGVEALHSLHIWALTVTQPVLSVH
IAIAQNADGQAVLKAASTRLQGKFRFHTITIQIEDYSEDMKDCQECQGPSD

hide sequence

RefSeq Acc Id:

ENSCAFP00000039147 ⟸ ENSCAFT00000048920

RefSeq Acc Id:

ENSCAFP00000056768 ⟸ ENSCAFT00000068271

RefSeq Acc Id:

ENSCAFP00000018683 ⟸ ENSCAFT00000020143

RefSeq Acc Id:

XP_038326574 ⟸ XM_038470646

RefSeq Acc Id:

XP_038451655 ⟸ XM_038595727

RefSeq Acc Id:	XP_038515739 ⟸ XM_038659811
- UniProtKB:	A0A8C0NJA6 (UniProtKB/TrEMBL), A0A8C0R559 (UniProtKB/TrEMBL), A0A8I3NLD3 (UniProtKB/TrEMBL), A0A8C0LAC9 (UniProtKB/TrEMBL), A0A8C0QA92 (UniProtKB/TrEMBL), A0A8I3NPH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038387435 ⟸ XM_038531507
- UniProtKB:	A0A8C0LAC9 (UniProtKB/TrEMBL), A0A8C0QA92 (UniProtKB/TrEMBL), A0A8I3NPH7 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845018505 ⟸ ENSCAFT00845023569

RefSeq Acc Id:

ENSCAFP00845018518 ⟸ ENSCAFT00845023595

RefSeq Acc Id:

ENSCAFP00845018548 ⟸ ENSCAFT00845023631

Promoters

RGD ID:

13682593

Promoter ID:

EPDNEW_C660

Type:

single initiation site

Name:

SLC30A2_1

Description:

solute carrier family 30 member 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	2	73,922,545 - 73,922,605	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000012702	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030015814	UniProtKB/TrEMBL
	ENSCAFG00040005653	UniProtKB/TrEMBL
	ENSCAFG00845013235	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000020143.5	UniProtKB/TrEMBL
	ENSCAFT00000048920.3	UniProtKB/TrEMBL
	ENSCAFT00000068271.2	UniProtKB/TrEMBL
	ENSCAFT00030029142.1	UniProtKB/TrEMBL
	ENSCAFT00030029220.1	UniProtKB/TrEMBL
	ENSCAFT00040010663.1	UniProtKB/TrEMBL
	ENSCAFT00845023569.1	UniProtKB/TrEMBL
	ENSCAFT00845023595	ENTREZGENE
	ENSCAFT00845023595.1	UniProtKB/TrEMBL
	ENSCAFT00845023631.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1510.10	UniProtKB/TrEMBL
InterPro	Cation_efflux	UniProtKB/TrEMBL
	Cation_efflux_CTD_sf	UniProtKB/TrEMBL
	Cation_efflux_TMD_sf	UniProtKB/TrEMBL
KEGG Report	cfa:478173	UniProtKB/TrEMBL
NCBI Gene	SLC30A2	ENTREZGENE
PANTHER	CATION EFFLUX PROTEIN/ ZINC TRANSPORTER	UniProtKB/TrEMBL
	ZINC TRANSPORTER 2	UniProtKB/TrEMBL
Pfam	Cation_efflux	UniProtKB/TrEMBL
Superfamily-SCOP	SSF160240	UniProtKB/TrEMBL
	SSF161111	UniProtKB/TrEMBL
UniProt	A0A8C0LAC9	ENTREZGENE
	A0A8C0NJA6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0QA92	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0R559	ENTREZGENE
	A0A8I3NLD3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NNZ6_CANLF	UniProtKB/TrEMBL
	A0A8I3NPH7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0STG4_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:46347	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM