OPRL1 (opioid related nociceptin receptor 1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: OPRL1 (opioid related nociceptin receptor 1) Canis lupus familiaris
Analyze
Symbol: OPRL1
Name: opioid related nociceptin receptor 1
RGD ID: 12121577
Description: ENCODES a protein that exhibits protein C-terminus binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); conditioned place preference (ortholog); eating behavior (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Anorexia (ortholog); Binge Drinking (ortholog); FOUND IN integral component of plasma membrane (ortholog); membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: nociceptin receptor
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12447,530,039 - 47,537,477 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2447,508,136 - 47,537,250 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2446,652,476 - 46,671,129 (+)NCBI
ROS_Cfam_1.02448,657,531 - 48,675,053 (+)NCBI
UMICH_Zoey_3.12447,502,159 - 47,521,409 (+)NCBI
UNSW_CanFamBas_1.02447,626,586 - 47,644,098 (+)NCBI
UU_Cfam_GSD_1.02448,365,597 - 48,383,399 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
OPRL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12447,530,039 - 47,537,477 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2447,508,136 - 47,537,250 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2446,652,476 - 46,671,129 (+)NCBI
ROS_Cfam_1.02448,657,531 - 48,675,053 (+)NCBI
UMICH_Zoey_3.12447,502,159 - 47,521,409 (+)NCBI
UNSW_CanFamBas_1.02447,626,586 - 47,644,098 (+)NCBI
UU_Cfam_GSD_1.02448,365,597 - 48,383,399 (+)NCBI
OPRL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl2064,080,082 - 64,100,643 (+)EnsemblGRCh38hg38GRCh38
GRCh382064,080,082 - 64,100,643 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh372062,711,435 - 62,731,996 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362062,181,932 - 62,202,440 (+)NCBINCBI36hg18NCBI36
Build 342062,181,931 - 62,202,440NCBI
Celera2059,397,677 - 59,420,493 (+)NCBI
Cytogenetic Map20q13.33NCBI
HuRef2059,457,992 - 59,460,858 (+)NCBIHuRef
CHM1_12062,612,487 - 62,633,363 (+)NCBICHM1_1
Oprl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392181,356,585 - 181,362,778 (+)NCBIGRCm39mm39
GRCm39 Ensembl2181,356,809 - 181,362,778 (+)Ensembl
GRCm382181,715,000 - 181,720,985 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2181,715,016 - 181,720,985 (+)EnsemblGRCm38mm10GRCm38
MGSCv372181,449,749 - 181,455,677 (+)NCBIGRCm37mm9NCBIm37
MGSCv362181,644,450 - 181,650,378 (+)NCBImm8
Celera2185,797,636 - 185,803,570 (+)NCBICelera
Cytogenetic Map2H4NCBI
cM Map2103.74NCBI
Oprl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.23168,831,934 - 168,839,920 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl3168,834,003 - 168,839,920 (+)Ensembl
Rnor_6.03177,223,779 - 177,231,663 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3177,225,737 - 177,231,663 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03180,932,344 - 180,943,574 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43170,869,862 - 170,873,417 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.13170,775,328 - 170,780,949 (+)NCBI
Celera3163,747,719 - 163,753,636 (-)NCBICelera
Cytogenetic Map3q43NCBI
Oprl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955528161,673 - 167,937 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955528161,673 - 184,515 (-)NCBIChiLan1.0ChiLan1.0
OPRL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12062,004,176 - 62,017,866 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2062,004,176 - 62,017,866 (+)Ensemblpanpan1.1panPan2
Oprl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640195,806,255 - 195,819,941 (+)NCBI
SpeTri2.0NW_00493651411,264,392 - 11,273,584 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
OPRL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1762,897,727 - 62,913,754 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11762,905,700 - 62,913,018 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Oprl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474129,713,937 - 29,720,617 (+)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 6
Low 5 1 5 8 1
Below cutoff 4 4 13 3 5 3 6 1 1 9 5

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005635328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014107305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038434464 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038434465 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038434466 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038434467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038458018 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038458019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038458020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038509572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038509573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038509574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038509575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038572955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038572956 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038572957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038572958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038637235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038637236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038637237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038637238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005635328   ⟹   XP_005635385
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12447,530,190 - 47,537,477 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014107305   ⟹   XP_013962780
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12447,530,039 - 47,537,477 (+)NCBI
Dog10K_Boxer_Tasha2446,663,686 - 46,671,129 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038434464   ⟹   XP_038290392
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02448,668,002 - 48,675,053 (+)NCBI
RefSeq Acc Id: XM_038434465   ⟹   XP_038290393
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02448,657,531 - 48,675,053 (+)NCBI
RefSeq Acc Id: XM_038434466   ⟹   XP_038290394
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02448,668,002 - 48,675,053 (+)NCBI
RefSeq Acc Id: XM_038434467   ⟹   XP_038290395
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02448,669,424 - 48,675,053 (+)NCBI
RefSeq Acc Id: XM_038458018   ⟹   XP_038313946
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2446,662,284 - 46,671,129 (+)NCBI
RefSeq Acc Id: XM_038458019   ⟹   XP_038313947
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2446,652,476 - 46,671,129 (+)NCBI
RefSeq Acc Id: XM_038458020   ⟹   XP_038313948
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2446,662,285 - 46,671,129 (+)NCBI
RefSeq Acc Id: XM_038509572   ⟹   XP_038365500
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12447,512,566 - 47,521,409 (+)NCBI
RefSeq Acc Id: XM_038509573   ⟹   XP_038365501
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12447,502,159 - 47,521,409 (+)NCBI
RefSeq Acc Id: XM_038509574   ⟹   XP_038365502
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12447,512,567 - 47,521,409 (+)NCBI
RefSeq Acc Id: XM_038509575   ⟹   XP_038365503
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12447,513,968 - 47,521,409 (+)NCBI
RefSeq Acc Id: XM_038572955   ⟹   XP_038428883
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02448,376,136 - 48,383,399 (+)NCBI
RefSeq Acc Id: XM_038572956   ⟹   XP_038428884
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02448,376,134 - 48,383,399 (+)NCBI
RefSeq Acc Id: XM_038572957   ⟹   XP_038428885
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02448,365,599 - 48,383,399 (+)NCBI
RefSeq Acc Id: XM_038572958   ⟹   XP_038428886
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02448,365,597 - 48,383,399 (+)NCBI
RefSeq Acc Id: XM_038637235   ⟹   XP_038493163
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02447,637,069 - 47,644,098 (+)NCBI
RefSeq Acc Id: XM_038637236   ⟹   XP_038493164
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02447,637,067 - 47,644,098 (+)NCBI
RefSeq Acc Id: XM_038637237   ⟹   XP_038493165
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02447,626,588 - 47,644,098 (+)NCBI
RefSeq Acc Id: XM_038637238   ⟹   XP_038493166
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02447,626,586 - 47,644,098 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_013962780   ⟸   XM_014107305
- Peptide Label: isoform X3
- UniProtKB: E2RPU9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005635385   ⟸   XM_005635328
- Sequence:
RefSeq Acc Id: XP_038365501   ⟸   XM_038509573
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038365500   ⟸   XM_038509572
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038365502   ⟸   XM_038509574
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038365503   ⟸   XM_038509575
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038493166   ⟸   XM_038637238
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038493165   ⟸   XM_038637237
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038493164   ⟸   XM_038637236
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038493163   ⟸   XM_038637235
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038290393   ⟸   XM_038434465
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038290392   ⟸   XM_038434464
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038290394   ⟸   XM_038434466
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038290395   ⟸   XM_038434467
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038313947   ⟸   XM_038458019
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038313946   ⟸   XM_038458018
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038313948   ⟸   XM_038458020
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038428886   ⟸   XM_038572958
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038428885   ⟸   XM_038572957
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038428884   ⟸   XM_038572956
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038428883   ⟸   XM_038572955
- Peptide Label: isoform X3

Promoters
RGD ID:13687695
Promoter ID:EPDNEW_C5764
Type:single initiation site
Name:OPRL1_1
Description:opioid related nociceptin receptor 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12447,529,969 - 47,530,029EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000013179 Ensembl, ENTREZGENE
Ensembl Protein ENSCAFP00000019429 ENTREZGENE
NCBI Gene OPRL1 ENTREZGENE
UniProt E2RPU9 ENTREZGENE
VGNC ID VGNC:44134 ENTREZGENE