Gene: INAFM2 (InaF motif containing 2) Canis lupus familiaris |
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Analyze |
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Symbol: |
INAFM2 |
Name: |
InaF motif containing 2 |
RGD ID: |
12120097 |
Description: |
FOUND IN membrane (inferred) |
Type: |
protein-coding
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RefSeq Status: |
MODEL |
Previously known as: |
putative transmembrane protein INAFM2 |
RGD Orthologs |
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Alliance Genes |
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More Info |
more info ...
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More Info |
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Latest Assembly: |
CanFam3.1 - Dog CanFam3.1 Assembly |
Position: |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 30 | 7,506,514 - 7,509,411 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 30 | 7,506,766 - 7,507,191 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 30 | 7,560,546 - 7,563,319 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 30 | 7,632,441 - 7,635,215 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 30 | 7,556,976 - 7,559,750 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 30 | 7,662,921 - 7,665,701 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 30 | 7,791,708 - 7,794,482 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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JBrowse: |
View Region in Genome Browser (JBrowse)
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Model |
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References
Genomics
Comparative Map Data
INAFM2 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 30 | 7,506,514 - 7,509,411 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 30 | 7,506,766 - 7,507,191 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 30 | 7,560,546 - 7,563,319 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 30 | 7,632,441 - 7,635,215 (+) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 30 | 7,556,976 - 7,559,750 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 30 | 7,662,921 - 7,665,701 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 30 | 7,791,708 - 7,794,482 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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INAFM2 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 15 | 40,323,692 - 40,326,715 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 15 | 40,323,692 - 40,326,715 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 15 | 40,615,893 - 40,618,916 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Celera | 15 | 17,383,166 - 17,384,899 (+) | NCBI | | Celera | | | Cytogenetic Map | 15 | q15.1 | NCBI | | | | | HuRef | 15 | 17,459,613 - 17,462,287 (+) | NCBI | | HuRef | | | CHM1_1 | 15 | 40,735,988 - 40,738,779 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 15 | 38,130,541 - 38,133,587 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Inafm2 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 2 | 118,576,239 - 118,579,291 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 118,576,239 - 118,579,291 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 118,745,758 - 118,748,810 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 118,745,758 - 118,748,810 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 118,571,498 - 118,574,543 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 118,571,503 - 118,572,309 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 119,900,645 - 119,903,695 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | E5 | NCBI | | | | | cM Map | 2 | 59.45 | NCBI | | | | |
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Inafm2 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 3 | 126,182,124 - 126,185,194 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 105,728,208 - 105,733,766 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | Rnor_6.0 | 3 | 110,540,349 - 110,545,882 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Cytogenetic Map | 3 | q35 | NCBI | | | | |
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Inafm2 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955416 | 7,251,468 - 7,253,776 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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INAFM2 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 16 | 29,524,669 - 29,560,674 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 15 | 33,676,107 - 33,708,805 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 15 | 19,224,767 - 19,290,520 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 15 | 37,540,075 - 37,545,461 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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Inafm2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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INAFM2 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 1 | 130,991,894 - 130,992,355 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 130,989,737 - 130,992,592 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 146,124,949 - 146,127,759 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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INAFM2 (Chlorocebus sabaeus - green monkey) |
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Inafm2 (Heterocephalus glaber - naked mole-rat) |
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Expression
Sequence
RefSeq Acc Id: |
ENSCAFT00000073653 ⟹ ENSCAFP00000054901 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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CanFam3.1 Ensembl | 30 | 7,506,766 - 7,507,191 (+) | Ensembl |
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RefSeq Acc Id: |
XM_014109662 ⟹ XP_013965137 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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CanFam3.1 | 30 | 7,506,514 - 7,509,411 (+) | NCBI | Dog10K_Boxer_Tasha | 30 | 7,560,546 - 7,563,319 (+) | NCBI |
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Sequence: |
GTGGCGGCGGCGGGGAAGCAGCTGACGGGCCGGCGGCGGCGGCGGCGCTGGCGGCAGTGACTGG TCCAGGCCCCGGCGGCGGCTGCAGCGCCGCGGTGGAGGGCTGCGGGCGGGCGGCGTGAGGAGCG GCGGCGGAGCGCGGAGCTGCCGGGAGCGGAGGGCGCCGGGCCGCCCCTTGTCCAGTCCTCGCAG GCCGCCAGGCCCCCTCCAGCCGGGGCCGTGGAGCACCGGGGCAAAGGCCGGGGCCCCCCCATGA AGGAGCGCGACGCGGCCCCGGCCGAGCGGGGCAAGCCGGCCACCTACACCGGGGACAAGAAGGC GAAGATGGCGGCCAAGACCAACAAGAAGTGGGTCCGGCTCGCCACCGTGTTCGCCTACGTGCTC TCCGTGTCGCTGGCCGCCATCGTGCTCGCCGTCTACTACAGCCTCATCTGGCAGCCGGTGGGCG CCGGGACCTCGGGGGGAGCCGCCGGCCCGCCCCCCGGCGGCTCCAACGCCACCGGCCCGTCCGG GACTTCGGGGGCGGCGGCCGGGCCCAATGCCACCGGCTCGTCCCGCCGCGAGGCACCGCGCGAC GCGCCCCCGCTGCAGGCGGCGCGGCCCGTGGCCCCCGAGCCCCCTGCCGACAGCCCCCTGGCCG GGCCGCTGGGGCGGCCGCGGGGGCCGGAGGAGGACTAGGAGGAAGCGGCGGCGGCGCCGGGGAG CCGTTGAACCCCTGCGCGCCGGGGGCGGCCAGGAACCGTTCTCCCCTCCCCAAGCCCGGAGGCA GGACTTTGCAGCAGGACGCGCGGGGAGCCCGCGGGAGCGACCCCCTCGGGAGTGAACGCCCTCC CTCCCCGCGACGGTCGCCAGCTCGCCCCGGGAGCGAGTGGCCTGCAGCCGGTTCTTCAGCCCAG GGACCACGATTCGGCGGGGCTGGGTGGGGAGTTTGGGGTTTGGTCTTCCCAGGACCGTGCTGCG CCAGGGCCCGGAGCCATAAAGGGAATGGGGGGAGGGGTGGGGAGATCCCAGCTCCGAACCCTTT TTCGCCGCTAGCTCTTGTGTATCCTACGTGCAGGAGTGACTCGGGCTTTCCCCCAAGATTCAGG GGAAGGAGGGAGCTATAGGGGCTCTTTAATAAGCTGAAGCTCTCGCAAGGAGGGCACCAAAAGT AGTGGAGCTCAGGTACGTCAACCTAGTTGCAGTGGCCACAGATGCATTTAATTTATAGATCCCT GTATATAGTTGTTGACATATGCACTAGAAGCTATAATTACACAGAACTATATGTATCCTCCCAC AACCCTGGGTAGCTACCCACTGATGGGGTCATGCAAGGGCTATTTGCTGGCCCCCAAAGTGCAG CTAGCCAGAAGGGCACAAACACTGTTGTTTTCATCACCCACTCTGTTCCTCCTATTTCAGAAAG ATAGGTTTATGACCCAAAAGAGTATAATCATCCTGAGACTTGAAAGGATAGTGGAAAACCTTAG GAGAAGTAGAAGCAGTTTAGGGAGAGTGGAGAACAAACTAATCGCCTCCTCTTCCCACCCTGGT GCCCCCTCGGAAGAGGCTTCCTGTTGCAGCCCTAAGTATCTGGAAATGGGCCAGGGAAGAAGGA AGGGAAAGAGCAGTGCCTCTGTGCTTCAATCCTTGGCCTTCTCTCCTCACAGAGTTCTTGTAGG AAGAACAAGCTTTTGTAAGTAGAGTGGCTCACAAGTGTTTTTATTTTATTTTCTGCTCCTCGAG ACCTCGTCTTGTTCCAGTAATCAATCACCCTTGCCTTCCCTCTTTCCTGAGCCTGCAGTGACTG CGTAGCCCTGCAATTAGGGCGAAATCTGATGTGAAACCAGAGCTTTGAGCACATTTTCTGGTTT TGCATTGTATTAGAGAACCCGAAAGGCTAAAAAGTGGGCTTCAAACTCAGGATTGTGCTTTGAT AGCCAGTTAATAGACCAGCCGTGGGAAAGTTGCATTGGTTTATCTTTACCTCTCCTGATAAATC CTACTTATATGCAGCCTATACTTTGATTGAGAGGAGAAACACCAAGGGAAGTGACATCTGTATA GTTCTGGGACAGCAAGAATTATACATCCTCAATTTGGATTCCATTTCCTTCTGCCACTTGCTTT TAGGCAATTGAGTGTGGGTAGTGACAAGATATCAAACCCCTTAGTGTTTCCTTTTTGGGAAATT AGGCACCTTAAAAAAAAAAAAGACAAAAACTTACCCACCTGAGTCCTAAAACAGTTTGTGTCCA GTTTTCTGGCCTACACTCTAGTTAGCTCTGACCCAAGTTTACAGGACAACAAGTCTTGCTTTAA GCCATGTTCTGTTGTGGGCAAGATAACAGCAGCTAAGCTGTCAGCCTAGGAGCCGGCTGGTAGC ACCCTCAAGATGTCTTGGCTGGAGGAGATTTCTGAGTAGCTGATGTGACTTTGGTCATTAGGAA GCCTTTGAGGCCTTTTTAAATTTTTGATGGGGGCCTGGGGGTGGGGAAGAAACATAAAATGCCA CTTTATAACTTCAATGATAGCCTGTAATTTATATTTATTGTGTGAATTTTTAGTCCTATATTTT AATAATTTGTAAATTGATCTTATTCCAAGAATCCTTTGAACTTGCAGGAGGACATCTGGGAATC CAGTCCCCTGCCCCCATCCCTGCATCCTGGACTGTCTAATCCACTTTGGGATGGATCACAGAGT CTAGAGAGACCACTCATAGGTCCAACTGCTGGCCTCCTGACTCTAAAGCCTTCACTGGAATTGG GACATTAGCTCCAGCTCTAGCTGTCAACATGACCAGAGACATTATTTATAATTCAGCCATTTAA ATATACCTGTCCTCAAAAAGTCCTGTATATTTTTTAAAAGTTTTATTTTTCAGGTGAACAAAAA TACATTCTAAGAACTCTA
hide sequence
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RefSeq Acc Id: |
XM_038441968 ⟹ XP_038297896 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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ROS_Cfam_1.0 | 30 | 7,632,441 - 7,635,215 (+) | NCBI |
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RefSeq Acc Id: |
XM_038516459 ⟹ XP_038372387 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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UMICH_Zoey_3.1 | 30 | 7,556,976 - 7,559,750 (+) | NCBI |
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RefSeq Acc Id: |
XM_038580050 ⟹ XP_038435978 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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UU_Cfam_GSD_1.0 | 30 | 7,791,708 - 7,794,482 (+) | NCBI |
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RefSeq Acc Id: |
XM_038644325 ⟹ XP_038500253 |
Type: |
CODING |
Position: |
Dog Assembly | Chr | Position (strand) | Source |
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UNSW_CanFamBas_1.0 | 30 | 7,662,921 - 7,665,701 (+) | NCBI |
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RefSeq Acc Id: |
XP_013965137 ⟸ XM_014109662 |
- UniProtKB: |
A0A8C0JXZ9 (UniProtKB/TrEMBL), A0A8C0RSG3 (UniProtKB/TrEMBL), A0A8P0P4B1 (UniProtKB/TrEMBL) |
- Sequence: |
MKERDAAPAERGKPATYTGDKKAKMAAKTNKKWVRLATVFAYVLSVSLAAIVLAVYYSLIWQPV GAGTSGGAAGPPPGGSNATGPSGTSGAAAGPNATGSSRREAPRDAPPLQAARPVAPEPPADSPL AGPLGRPRGPEED
hide sequence
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RefSeq Acc Id: |
ENSCAFP00000054901 ⟸ ENSCAFT00000073653 |
RefSeq Acc Id: |
XP_038372387 ⟸ XM_038516459 |
RefSeq Acc Id: |
XP_038500253 ⟸ XM_038644325 |
RefSeq Acc Id: |
XP_038297896 ⟸ XM_038441968 |
- UniProtKB: |
A0A8C0JXZ9 (UniProtKB/TrEMBL), A0A8C0RSG3 (UniProtKB/TrEMBL), A0A8P0P4B1 (UniProtKB/TrEMBL) |
RefSeq Acc Id: |
XP_038435978 ⟸ XM_038580050 |
- UniProtKB: |
A0A8C0JXZ9 (UniProtKB/TrEMBL), A0A8C0RSG3 (UniProtKB/TrEMBL), A0A8P0P4B1 (UniProtKB/TrEMBL) |
Additional Information
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