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Gene: PLA2G12B (phospholipase A2 group XIIB) Canis lupus familiaris

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Symbol:

PLA2G12B

Name:

phospholipase A2 group XIIB

RGD ID:

12119809

Description:

ENCODES a protein that exhibits calcium ion binding (inferred); phospholipase A2 activity (inferred); INVOLVED IN cholesterol homeostasis (ortholog); low-density lipoprotein particle remodeling (ortholog); triglyceride homeostasis (ortholog); FOUND IN extracellular region (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

group XIIB secretory phospholipase A2-like protein

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	23,539,909 - 23,561,211 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	23,541,258 - 23,561,041 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	23,678,362 - 23,699,685 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	23,826,379 - 23,847,936 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	23,827,748 - 23,847,930 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	23,725,146 - 23,746,673 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	23,924,120 - 23,945,646 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	24,279,156 - 24,300,450 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

arachidonate secretion (IEA)

cholesterol homeostasis (ISO)

lipid catabolic process (IEA)

low-density lipoprotein particle remodeling (ISO)

phospholipid metabolic process (IEA)

triglyceride homeostasis (ISO)

Cellular Component

extracellular region (IEA)

Molecular Function

calcium ion binding (IEA)

phospholipase A2 activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

PLA2G12B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	23,539,909 - 23,561,211 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	23,541,258 - 23,561,041 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	23,678,362 - 23,699,685 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	23,826,379 - 23,847,936 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	23,827,748 - 23,847,930 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	23,725,146 - 23,746,673 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	23,924,120 - 23,945,646 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	24,279,156 - 24,300,450 (-)	NCBI		UU_Cfam_GSD_1.0

PLA2G12B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	72,934,762 - 72,954,806 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	72,934,762 - 72,954,806 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	74,694,520 - 74,714,564 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	74,364,944 - 74,384,516 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	74,364,943 - 74,384,516	NCBI
Celera	10	67,980,077 - 67,999,649 (-)	NCBI		Celera
Cytogenetic Map	10	q22.1	NCBI
HuRef	10	68,688,779 - 68,708,351 (-)	NCBI		HuRef
CHM1_1	10	74,976,668 - 74,996,240 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	73,806,140 - 73,826,184 (-)	NCBI		T2T-CHM13v2.0

Pla2g12b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	59,239,242 - 59,257,798 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	59,239,482 - 59,257,798 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	59,403,420 - 59,421,976 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	59,403,660 - 59,421,976 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	58,866,433 - 58,884,724 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	58,799,042 - 58,817,333 (+)	NCBI		MGSCv36	mm8
Celera	10	60,503,964 - 60,522,245 (+)	NCBI		Celera
Cytogenetic Map	10	B4	NCBI
cM Map	10	29.54	NCBI

Pla2g12b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	27,910,620 - 27,931,734 (+)	NCBI		GRCr8
mRatBN7.2	20	27,369,196 - 27,389,517 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	27,370,266 - 27,388,743 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	20	28,989,440 - 29,007,967 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	28,989,491 - 29,007,968 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	30,793,778 - 30,812,293 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	20	28,813,714 - 28,832,140 (+)	NCBI		Celera
Cytogenetic Map	20	q11	NCBI

Pla2g12b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	18,694,496 - 18,719,337 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955437	18,694,496 - 18,723,311 (+)	NCBI	ChiLan1.0	ChiLan1.0

PLA2G12B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	85,111,134 - 85,130,164 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	85,116,402 - 85,135,486 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	69,482,065 - 69,502,398 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	71,946,072 - 71,965,616 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	71,946,506 - 71,965,482 (-)	Ensembl	panpan1.1		panPan2

Pla2g12b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	57,579,733 - 57,604,031 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936521	6,072,486 - 6,096,791 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936521	6,072,487 - 6,096,791 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PLA2G12B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	75,753,727 - 75,778,800 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	75,754,525 - 75,778,933 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	81,819,851 - 81,844,252 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PLA2G12B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	58,311,609 - 58,335,286 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	58,312,500 - 58,336,930 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	18,907,588 - 18,935,677 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pla2g12b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	6,653,698 - 6,680,489 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	6,653,307 - 6,680,063 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in PLA2G12B
190 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005619005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038474370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038474371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038533727	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038533728	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038598027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038598028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038662334	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038662335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_546163	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000088	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000050207 ⟹ ENSCAFP00000039510

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	4	23,541,258 - 23,561,041 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845010570 ⟹ ENSCAFP00845008230

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	4	23,827,748 - 23,847,930 (-)	Ensembl

RefSeq Acc Id:

XM_005619005 ⟹ XP_005619062

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	23,539,909 - 23,561,211 (-)	NCBI
Dog10K_Boxer_Tasha	4	23,678,362 - 23,699,685 (-)	NCBI

Sequence:

show sequence

AACCTCCATAGCTATGTTTAAAGTCCACCTCTGGGGAATACACAGATTGAGTGTTCCAGATAAT
CCCCTTTCCAGTCCTGCTTGACATCTGGCCAGCAGGCTTCGGACCTGGACTTCCTGGGACACTG
GCCAGGGTTTGAGGAAGACCCCAGTACCTACCTGGCTTCAGGATGAAGCTGGCCATGGGCTTCC
TGATTTTGTGGCTCAGCCTGGGGGGTGGCCTGGCTCAGAGTGACACCAGCCCCGATGCCGAGGA
GTCCTATTCAGACTGGGGCCTTCGGCACATCAGGGGCAGCTTTGAATCTGTCAACAGCTACTTC
GATTCCTTTCTGGAGCTTCTCGGAGGGAAAAATGGAATCTGCCAGTACAGATGCCGTTATGGAA
AGGCACCAATGCCCAGACCCGGCTACAAGCCTCAGGAGCCCAACGGCTGCAGCTCCTATTTCCT
GGGTCTTAAGATACCAGAAAGTATGGACTTCGGCATTCCAGCAATGACCAAGTGCTGCAACCAG
CTGGATGTCTGTTATGACACTTGTGGTGCCAATAAGTATCGCTGTGATGCAAAATTCCGATGGT
GTCTCCATTCTATCTGTTCTGATCTGAAGCGGAGTCTGGGCTTTGTCTCTAATGTGGCAGCCTG
TGATTCTCTGGTTGATACCGTGTTCAATACTGTGTGGACCTTGGGCTGCCGACCTTTTATGAAT
AGCCAACGTGCAGCATGCATCTGTGCAGAAGAGGAGAAAGAAGAGTTGTGAAAAAGAGGTGCTC
CCTTCCTGGTTTTGAGTGACGCCACAGCTGTCAGTCTCTGAGAGGGTAGTGTGGCAGATATGTC
TCATCCTTGCTTCCAAAAGTTTGGATGCCACAAAGCAAGAGAAAGAAAACCTTGTTCTACAGCT
GGAAAGTGAGTCCCATCCTTTGAGGAGAATTGGAAAAATGCCATGGAAATATTTGAAGACTATT
CTTCATTTTAACACTGGATTCCCCAACCAAGACATATTGCCTGGCAACTCAGTTCTTAAAGACT
AAAATAAAGACGAAAATACTGGGATTCCTGGACTGGGTAATTCTTAAGTGAAATTTTACAGAGT
TCAACCATTTGCGAGGCAAGGACTTTCCTCTGGTCCATGTCTTAGTTGCCAGTAGTATCTCATA
TTTAATAAAGTGTACTTTTTAGAAAAGAGATGAATGAATTCCATTATCTCCAATGTGCTTCCAT
TTCATTTAGAAGAGAACAGAACCCATCTCGGTAAGTTCCACCAATGATAACCATCATTCTCACT
GGTGCTGAAGAGATAAGAACAGGCGGGCAAAGTCAGAGACTTACCTGGCCAATGGAGGTGAAGA
TCAGATGTTGTTAGAGGTTCCATTTTTTCCTTCAGTGAACTATTCCTGCTGATATTCCCAATTC
CTAAGTGGTATTAGTGTCATGTTAAGATCTGAGAAGCACTTGGTAAAAATTGCGACTGAAGAAA
GCCAGGAAAAGTCCCTGAAATCTGAGGATACACAAATGGTCAATCCCTAAACTATGGTTCTCTA
CCCTGACTGCAGATTAGAAGCACCAGAGGAGCATTAAAAAACAAAGCATCTCTGGGGGTGGTAT
CTCCCTATTGGTGTTTTGCAAAGGCTCCACACCTGATTCTGATGCCCTGGGAAGGCTGAAGTCC
TAAGGTCAGGAACTGGCAAGTGAAGCTCATGGGCCAAATCAGGCCTAACACCTGCTTCTGTGAA
GTTTTATTGGACCACAACCATGCTCTCATTTGTTTATGGCCACTCCTGTGCTACAACCTCAGAC
TTGAATAGTTGTGACAGACTGTATGGCCAGAAAGCCTAAAACGTTTACCATTTGGCCCTTGACA
GAAAAAGTTGGCCAACTCCTGACTTGGGTCATTCTCTTTTCCCTTCTTTTTGTTAATTTTACTG
GTTCGTTAAGAATTGTTGATGATAGCCATTTCTAAAAAGAAAAAGAAGAAAAACTGTTTCCTGA
TCTGTAAAGCCATAAAATTAATTGGCACATTAAGAAATTGGATTTAATTGCATATAAAATTTAT
CCCTGTGGTTTATAATATTTATTTCAATAAAATGTATTAAGCATCTACCTACGAAA

hide sequence

RefSeq Acc Id:

XM_038474370 ⟹ XP_038330298

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	23,725,146 - 23,746,673 (-)	NCBI

RefSeq Acc Id:

XM_038474371 ⟹ XP_038330299

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	4	23,725,146 - 23,746,673 (-)	NCBI

RefSeq Acc Id:

XM_038533727 ⟹ XP_038389655

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	24,279,156 - 24,300,450 (-)	NCBI

RefSeq Acc Id:

XM_038533728 ⟹ XP_038389656

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	4	24,279,156 - 24,300,450 (-)	NCBI

RefSeq Acc Id:

XM_038598027 ⟹ XP_038453955

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	23,924,120 - 23,945,646 (-)	NCBI

RefSeq Acc Id:

XM_038598028 ⟹ XP_038453956

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	4	23,924,120 - 23,945,646 (-)	NCBI

RefSeq Acc Id:

XM_038662334 ⟹ XP_038518262

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	23,826,379 - 23,847,936 (-)	NCBI

RefSeq Acc Id:

XM_038662335 ⟹ XP_038518263

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	4	23,826,379 - 23,847,936 (-)	NCBI

RefSeq Acc Id:

XM_546163 ⟹ XP_546163

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	23,539,909 - 23,561,210 (-)	NCBI
Dog10K_Boxer_Tasha	4	23,678,362 - 23,699,685 (-)	NCBI

Sequence:

show sequence

ACCTCCATAGCTATGTTTAAAGTCCACCTCTGGGGAATACACAGATTGAGTGTTCCAGATAATC
CCCTTTCCAGTCCTGCTTGACATCTGGCCAGCAGGCTTCGGACCTGGACTTCCTGGGACACTGG
CCAGGGTTTGAGGAAGACCCCAGTACCTACCTGGCTTCAGGATGAAGCTGGCCATGGGCTTCCT
GATTTTGTGGCTCAGCCTGGGGGGTGGCCTGGCTCAGAGTGACACCAGCCCCGATGCCGAGGAG
TCCTATTCAGACTGGGGCCTTCGGCACATCAGGGGCAGCTTTGAATCTGTCAACAGCTACTTCG
ATTCCTTTCTGGAGCTTCTCGGAGGGAAAAATGGAATCTGCCAGTACAGATGCCGTTATGGAAA
GGCACCAATGCCCAGACCCGGCTACAAGCCTCAGGAGCCCAACGGCTGCAGCTCCTATTTCCTG
GGTCTTAAGATACCAGAAAGTATGGACTTCGGCATTCCAGCAATGACCAAGTGCTGCAACCAGC
TGGATGTCTGTTATGACACTTGTGGTGCCAATAAGTATCGCTGTGATGCAAAATTCCGATGGTG
TCTCCATTCTATCTGTTCTGATCTGAAGCGGAGTCTGGGCTTTGTCTCTAATGTGGCAGTAGCC
TGTGATTCTCTGGTTGATACCGTGTTCAATACTGTGTGGACCTTGGGCTGCCGACCTTTTATGA
ATAGCCAACGTGCAGCATGCATCTGTGCAGAAGAGGAGAAAGAAGAGTTGTGAAAAAGAGGTGC
TCCCTTCCTGGTTTTGAGTGACGCCACAGCTGTCAGTCTCTGAGAGGGTAGTGTGGCAGATATG
TCTCATCCTTGCTTCCAAAAGTTTGGATGCCACAAAGCAAGAGAAAGAAAACCTTGTTCTACAG
CTGGAAAGTGAGTCCCATCCTTTGAGGAGAATTGGAAAAATGCCATGGAAATATTTGAAGACTA
TTCTTCATTTTAACACTGGATTCCCCAACCAAGACATATTGCCTGGCAACTCAGTTCTTAAAGA
CTAAAATAAAGACGAAAATACTGGGATTCCTGGACTGGGTAATTCTTAAGTGAAATTTTACAGA
GTTCAACCATTTGCGAGGCAAGGACTTTCCTCTGGTCCATGTCTTAGTTGCCAGTAGTATCTCA
TATTTAATAAAGTGTACTTTTTAGAAAAGAGATGAATGAATTCCATTATCTCCAATGTGCTTCC
ATTTCATTTAGAAGAGAACAGAACCCATCTCGGTAAGTTCCACCAATGATAACCATCATTCTCA
CTGGTGCTGAAGAGATAAGAACAGGCGGGCAAAGTCAGAGACTTACCTGGCCAATGGAGGTGAA
GATCAGATGTTGTTAGAGGTTCCATTTTTTCCTTCAGTGAACTATTCCTGCTGATATTCCCAAT
TCCTAAGTGGTATTAGTGTCATGTTAAGATCTGAGAAGCACTTGGTAAAAATTGCGACTGAAGA
AAGCCAGGAAAAGTCCCTGAAATCTGAGGATACACAAATGGTCAATCCCTAAACTATGGTTCTC
TACCCTGACTGCAGATTAGAAGCACCAGAGGAGCATTAAAAAACAAAGCATCTCTGGGGGTGGT
ATCTCCCTATTGGTGTTTTGCAAAGGCTCCACACCTGATTCTGATGCCCTGGGAAGGCTGAAGT
CCTAAGGTCAGGAACTGGCAAGTGAAGCTCATGGGCCAAATCAGGCCTAACACCTGCTTCTGTG
AAGTTTTATTGGACCACAACCATGCTCTCATTTGTTTATGGCCACTCCTGTGCTACAACCTCAG
ACTTGAATAGTTGTGACAGACTGTATGGCCAGAAAGCCTAAAACGTTTACCATTTGGCCCTTGA
CAGAAAAAGTTGGCCAACTCCTGACTTGGGTCATTCTCTTTTCCCTTCTTTTTGTTAATTTTAC
TGGTTCGTTAAGAATTGTTGATGATAGCCATTTCTAAAAAGAAAAAGAAGAAAAACTGTTTCCT
GATCTGTAAAGCCATAAAATTAATTGGCACATTAAGAAATTGGATTTAATTGCATATAAAATTT
ATCCCTGTGGTTTATAATATTTATTTCAATAAAATGTATTAAGCATCTACCTACGAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005619062	(Get FASTA)	NCBI Sequence Viewer
	XP_038330298	(Get FASTA)	NCBI Sequence Viewer
	XP_038330299	(Get FASTA)	NCBI Sequence Viewer
	XP_038389655	(Get FASTA)	NCBI Sequence Viewer
	XP_038389656	(Get FASTA)	NCBI Sequence Viewer
	XP_038453955	(Get FASTA)	NCBI Sequence Viewer
	XP_038453956	(Get FASTA)	NCBI Sequence Viewer
	XP_038518262	(Get FASTA)	NCBI Sequence Viewer
	XP_038518263	(Get FASTA)	NCBI Sequence Viewer
	XP_546163	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000039510.1
	ENSCAFP00030017897.1
	ENSCAFP00040001390.1
	ENSCAFP00845008230
	ENSCAFP00845008230.1

RefSeq Acc Id:	XP_005619062 ⟸ XM_005619005
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0LMQ4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLAMGFLILWLSLGGGLAQSDTSPDAEESYSDWGLRHIRGSFESVNSYFDSFLELLGGKNGIC QYRCRYGKAPMPRPGYKPQEPNGCSSYFLGLKIPESMDFGIPAMTKCCNQLDVCYDTCGANKYR CDAKFRWCLHSICSDLKRSLGFVSNVAACDSLVDTVFNTVWTLGCRPFMNSQRAACICAEEEKE EL hide sequence

RefSeq Acc Id:	XP_546163 ⟸ XM_546163
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0PP53 (UniProtKB/TrEMBL), A0A8I3RSZ9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKLAMGFLILWLSLGGGLAQSDTSPDAEESYSDWGLRHIRGSFESVNSYFDSFLELLGGKNGIC QYRCRYGKAPMPRPGYKPQEPNGCSSYFLGLKIPESMDFGIPAMTKCCNQLDVCYDTCGANKYR CDAKFRWCLHSICSDLKRSLGFVSNVAVACDSLVDTVFNTVWTLGCRPFMNSQRAACICAEEEK EEL hide sequence

Ensembl Acc Id:

ENSCAFP00000039510 ⟸ ENSCAFT00000050207

RefSeq Acc Id:	XP_038330299 ⟸ XM_038474371
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038330298 ⟸ XM_038474370
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038453956 ⟸ XM_038598028
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038453955 ⟸ XM_038598027
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038518263 ⟸ XM_038662335
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0LMQ4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038518262 ⟸ XM_038662334
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0PP53 (UniProtKB/TrEMBL), A0A8I3RSZ9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038389656 ⟸ XM_038533728
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0LMQ4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038389655 ⟸ XM_038533727
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0PP53 (UniProtKB/TrEMBL), A0A8I3RSZ9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845008230 ⟸ ENSCAFT00845010570

Promoters

RGD ID:

13682917

Promoter ID:

EPDNEW_C987

Type:

multiple initiation site

Name:

PLA2G12B_1

Description:

phospholipase A2 group XIIB

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	4	23,561,138 - 23,561,198	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000031548	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030011069	UniProtKB/TrEMBL
	ENSCAFG00040000910	UniProtKB/TrEMBL
	ENSCAFG00845005974	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000050207.3	UniProtKB/TrEMBL
	ENSCAFT00030020518.1	UniProtKB/TrEMBL
	ENSCAFT00040001643.1	UniProtKB/TrEMBL
	ENSCAFT00845010570	ENTREZGENE
	ENSCAFT00845010570.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.90.10	UniProtKB/TrEMBL
InterPro	PLA2G12	UniProtKB/TrEMBL
	PLipase_A2_dom_sf	UniProtKB/TrEMBL
NCBI Gene	PLA2G12B	ENTREZGENE
PANTHER	GROUP XIIB SECRETORY PHOSPHOLIPASE A2-LIKE PROTEIN	UniProtKB/TrEMBL
	PTHR12824	UniProtKB/TrEMBL
Pfam	PLA2G12	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48619	UniProtKB/TrEMBL
UniProt	A0A8C0LMQ4	ENTREZGENE
	A0A8C0PP53	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RSZ9	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:44620	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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