KIF7 (kinesin family member 7) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: KIF7 (kinesin family member 7) Canis lupus familiaris
Analyze
Symbol: KIF7
Name: kinesin family member 7
RGD ID: 12117203
Description: ENCODES a protein that exhibits identical protein binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); Bloom syndrome (ortholog); cerebellar ataxia (ortholog); FOUND IN ciliary basal body (ortholog); cilium (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: kinesin-like protein KIF7; LOW QUALITY PROTEIN: kinesin-like protein KIF7
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1352,630,059 - 52,649,164 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl352,630,494 - 52,649,231 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha355,264,128 - 55,283,207 (-)NCBI
ROS_Cfam_1.0353,046,500 - 53,065,607 (-)NCBI
UMICH_Zoey_3.1352,568,589 - 52,587,659 (-)NCBI
UNSW_CanFamBas_1.0352,778,634 - 52,797,720 (-)NCBI
UU_Cfam_GSD_1.0353,118,767 - 53,137,856 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
KIF7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1352,630,059 - 52,649,164 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl352,630,494 - 52,649,231 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha355,264,128 - 55,283,207 (-)NCBI
ROS_Cfam_1.0353,046,500 - 53,065,607 (-)NCBI
UMICH_Zoey_3.1352,568,589 - 52,587,659 (-)NCBI
UNSW_CanFamBas_1.0352,778,634 - 52,797,720 (-)NCBI
UU_Cfam_GSD_1.0353,118,767 - 53,137,856 (-)NCBI
KIF7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1589,608,789 - 89,655,467 (-)EnsemblGRCh38hg38GRCh38
GRCh381589,627,977 - 89,663,086 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371590,171,208 - 90,198,698 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361587,972,211 - 87,992,578 (-)NCBINCBI36hg18NCBI36
Build 341587,972,210 - 87,992,578NCBI
Celera1566,573,786 - 66,601,377 (-)NCBI
Cytogenetic Map15q26.1NCBI
HuRef1566,284,310 - 66,311,684 (-)NCBIHuRef
CHM1_11590,012,172 - 90,039,692 (-)NCBICHM1_1
Kif7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39779,347,846 - 79,365,520 (-)NCBIGRCm39mm39
GRCm39 Ensembl779,347,846 - 79,365,468 (-)Ensembl
GRCm38779,698,098 - 79,715,772 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl779,698,098 - 79,715,720 (-)EnsemblGRCm38mm10GRCm38
MGSCv37786,842,984 - 86,859,072 (-)NCBIGRCm37mm9NCBIm37
MGSCv36775,564,956 - 75,583,638 (-)NCBImm8
Celera777,096,856 - 77,112,945 (-)NCBICelera
Cytogenetic Map7D2NCBI
Kif7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21133,639,487 - 133,658,539 (-)NCBImRatBN7.2
Rnor_6.0 Ensembl1141,434,625 - 141,451,075 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01141,434,183 - 141,452,592 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01142,395,121 - 142,413,510 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41135,472,621 - 135,489,513 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11135,550,432 - 135,569,402 (-)NCBI
Celera1125,703,693 - 125,721,866 (-)NCBICelera
Cytogenetic Map1q31NCBI
Kif7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541615,555,933 - 15,570,985 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541615,555,959 - 15,570,925 (+)NCBIChiLan1.0ChiLan1.0
KIF7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11587,528,828 - 87,555,931 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1587,529,290 - 87,553,445 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01568,312,064 - 68,349,864 (-)NCBIMhudiblu_PPA_v0panPan3
Kif7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640130,883,516 - 130,903,801 (+)NCBI
SpeTri2.0NW_00493648315,430,735 - 15,450,872 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIF7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl755,200,593 - 55,220,497 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1755,200,591 - 55,220,237 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2760,093,446 - 60,109,975 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KIF7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1298,172,294 - 8,193,775 (-)NCBI
ChlSab1.1 Ensembl298,170,883 - 8,191,323 (-)Ensembl
Vero_WHO_p1.0NW_02366605938,619,706 - 38,641,263 (+)NCBI
Kif7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476816,674,485 - 16,732,698 (-)NCBI


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 1 3 1 1 8 2
Low 4 5 19 6 5 6 6 6 11 8 2 4
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014112421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014112422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014112423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022416932 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038471902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038532834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038597156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661337 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661338 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038661339 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000019028   ⟹   ENSCAFP00000017637
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl352,630,494 - 52,649,231 (-)Ensembl
RefSeq Acc Id: XM_014112421   ⟹   XP_013967896
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1352,630,059 - 52,649,164 (-)NCBI
Dog10K_Boxer_Tasha355,264,128 - 55,283,207 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014112422   ⟹   XP_013967897
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1352,630,059 - 52,649,164 (-)NCBI
Dog10K_Boxer_Tasha355,264,128 - 55,283,207 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014112423   ⟹   XP_013967898
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1352,630,059 - 52,649,164 (-)NCBI
Dog10K_Boxer_Tasha355,264,128 - 55,283,207 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022416932   ⟹   XP_022272640
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1352,630,059 - 52,649,164 (-)NCBI
Dog10K_Boxer_Tasha355,264,128 - 55,283,207 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038471902   ⟹   XP_038327830
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1352,568,589 - 52,587,659 (-)NCBI
RefSeq Acc Id: XM_038532831   ⟹   XP_038388759
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0353,118,767 - 53,137,856 (-)NCBI
RefSeq Acc Id: XM_038532832   ⟹   XP_038388760
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0353,118,767 - 53,137,856 (-)NCBI
RefSeq Acc Id: XM_038532833   ⟹   XP_038388761
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0353,118,767 - 53,137,856 (-)NCBI
RefSeq Acc Id: XM_038532834   ⟹   XP_038388762
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0353,118,767 - 53,137,856 (-)NCBI
RefSeq Acc Id: XM_038597156   ⟹   XP_038453084
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0352,778,634 - 52,797,720 (-)NCBI
RefSeq Acc Id: XM_038661336   ⟹   XP_038517264
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0353,046,500 - 53,065,607 (-)NCBI
RefSeq Acc Id: XM_038661337   ⟹   XP_038517265
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0353,046,500 - 53,065,607 (-)NCBI
RefSeq Acc Id: XM_038661338   ⟹   XP_038517266
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0353,046,500 - 53,065,607 (-)NCBI
RefSeq Acc Id: XM_038661339   ⟹   XP_038517267
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0353,046,500 - 53,065,607 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_013967898   ⟸   XM_014112423
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_013967897   ⟸   XM_014112422
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_013967896   ⟸   XM_014112421
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_022272640   ⟸   XM_022416932
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSCAFP00000017637   ⟸   ENSCAFT00000019028
RefSeq Acc Id: XP_038327830   ⟸   XM_038471902
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038453084   ⟸   XM_038597156
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038517265   ⟸   XM_038661337
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038517267   ⟸   XM_038661339
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038517266   ⟸   XM_038661338
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038517264   ⟸   XM_038661336
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038388760   ⟸   XM_038532832
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038388762   ⟸   XM_038532834
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038388761   ⟸   XM_038532833
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038388759   ⟸   XM_038532831
- Peptide Label: isoform X4
Protein Domains
Kinesin motor


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000011977 Ensembl, ENTREZGENE
NCBI Gene KIF7 ENTREZGENE
VGNC ID VGNC:42411 ENTREZGENE