OR8C7 (olfactory receptor family 8 subfamily C member 7) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: OR8C7 (olfactory receptor family 8 subfamily C member 7) Canis lupus familiaris
Analyze
Symbol: OR8C7
Name: olfactory receptor family 8 subfamily C member 7
RGD ID: 12111091
Description: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Type: protein-coding
RefSeq Status: INFERRED
Previously known as: cOR8C4; cOR8C4 olfactory receptor family 8 subfamily C-like; olfactory receptor 143
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.159,975,668 - 9,976,603 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl59,975,668 - 9,976,993 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha510,020,702 - 10,021,634 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.059,914,984 - 9,915,892 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.159,987,310 - 9,988,242 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.059,957,372 - 9,958,304 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.059,994,773 - 9,995,681 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:14962662   PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in OR8C7
9 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00000078308   ⟹   ENSCAFP00000054316
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl59,975,668 - 9,976,993 (-)Ensembl
RefSeq Acc Id: NM_001388786   ⟹   NP_001375715
RefSeq Status: INFERRED
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha510,020,702 - 10,021,634 (-)NCBI
UMICH_Zoey_3.159,987,310 - 9,988,242 (-)NCBI
UNSW_CanFamBas_1.059,957,372 - 9,958,304 (-)NCBI
RefSeq Acc Id: XM_038535820   ⟹   XP_038391748
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.059,994,773 - 9,995,681 (-)NCBI
RefSeq Acc Id: XM_038664565   ⟹   XP_038520493
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.059,914,984 - 9,915,892 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001375715 (Get FASTA)   NCBI Sequence Viewer  
  XP_038391748 (Get FASTA)   NCBI Sequence Viewer  
  XP_038520493 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000054316.1
  ENSCAFP00030000536.1
  ENSCAFP00845015683
  ENSCAFP00845015683.1
Reference Protein Sequences
RefSeq Acc Id: ENSCAFP00000054316   ⟸   ENSCAFT00000078308
RefSeq Acc Id: NP_001375715   ⟸   NM_001388786
- UniProtKB: A0A8C0R9F4 (UniProtKB/TrEMBL),   A0A8P0T6M1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038520493   ⟸   XM_038664565
- Peptide Label: isoform X1
- UniProtKB: A0A8I3RWE8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038391748   ⟸   XM_038535820
- Peptide Label: isoform X1
- UniProtKB: A0A8C0R9F4 (UniProtKB/TrEMBL),   A0A8P0T6M1 (UniProtKB/TrEMBL)
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000049666 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030000369 UniProtKB/TrEMBL
  ENSCAFG00845011292 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000078308.2 UniProtKB/TrEMBL
  ENSCAFT00030000610.1 UniProtKB/TrEMBL
  ENSCAFT00845020018 ENTREZGENE
  ENSCAFT00845020018.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene cOR8C4 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8C0R9F4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3RWE8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0T6M1 ENTREZGENE
UniProt Secondary A0A8P0T6M1 UniProtKB/TrEMBL
VGNC ID VGNC:98632 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-03-10 OR8C7  olfactory receptor family 8 subfamily C member 7  cOR8C4  cOR8C4 olfactory receptor family 8 subfamily C-like  Symbol and/or name change 5135510 APPROVED