RAB19 (RAB19, member RAS oncogene family)

Gene: RAB19 (RAB19, member RAS oncogene family) Canis lupus familiaris

Analyze

Symbol:

RAB19

Name:

RAB19, member RAS oncogene family

RGD ID:

12110069

Description:

ENCODES a protein that exhibits GTP binding (inferred); GTPase activity (inferred); nucleotide binding (inferred); INVOLVED IN vesicle-mediated transport (inferred); ASSOCIATED WITH genetic disease (ortholog); pleomorphic xanthoastrocytoma (ortholog); RASopathy (ortholog); FOUND IN Golgi cisterna (inferred); membrane (inferred); trans-Golgi network (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ras-related protein Rab-19

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	8,544,353 - 8,562,714 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	8,544,804 - 8,562,346 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	9,388,399 - 9,406,743 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	8,465,402 - 8,483,792 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	8,465,559 - 8,483,792 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	8,416,377 - 8,434,728 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	8,260,776 - 8,279,091 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	8,329,152 - 8,347,508 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

pleomorphic xanthoastrocytoma (ISO)

RASopathy (ISO)

syndactyly (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

vesicle-mediated transport (IEA)

Cellular Component

Golgi cisterna (IEA)

membrane (IEA)

trans-Golgi network (IEA)

Molecular Function

GTP binding (IEA)

GTPase activity (IEA)

nucleotide binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202	PMID:33561422

Genomics

Comparative Map Data

RAB19
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	16	8,544,353 - 8,562,714 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	16	8,544,804 - 8,562,346 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	16	9,388,399 - 9,406,743 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	16	8,465,402 - 8,483,792 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	16	8,465,559 - 8,483,792 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	16	8,416,377 - 8,434,728 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	16	8,260,776 - 8,279,091 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	16	8,329,152 - 8,347,508 (-)	NCBI		UU_Cfam_GSD_1.0

RAB19
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	7	140,404,058 - 140,427,974 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	7	140,404,058 - 140,427,974 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	7	140,103,858 - 140,127,774 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	7	139,753,916 - 139,772,419 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	7	134,825,908 - 134,848,114 (+)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI
HuRef	7	134,397,822 - 134,419,352 (+)	NCBI		HuRef
CHM1_1	7	140,038,750 - 140,060,965 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	7	141,718,006 - 141,742,144 (+)	NCBI		T2T-CHM13v2.0
CRA_TCAGchr7v2	7	139,432,676 - 139,454,883 (+)	NCBI

Rab19
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	39,357,645 - 39,367,600 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	39,358,109 - 39,367,314 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	39,380,709 - 39,390,666 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	39,381,175 - 39,390,380 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	39,331,427 - 39,340,379 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	39,311,035 - 39,319,987 (+)	NCBI		MGSCv36	mm8
Celera	6	39,366,560 - 39,375,380 (+)	NCBI		Celera
Cytogenetic Map	6	B1	NCBI
cM Map	6	18.16	NCBI

Rab19
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	69,123,962 - 69,133,691 (+)	NCBI		GRCr8
mRatBN7.2	4	68,157,159 - 68,166,889 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	68,156,881 - 68,166,886 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	73,080,369 - 73,090,100 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	69,001,502 - 69,011,233 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	67,406,609 - 67,416,230 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	67,166,412 - 67,176,141 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	67,165,883 - 67,176,363 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	66,972,872 - 66,982,892 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	66,889,446 - 66,899,175 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	63,162,671 - 63,172,399 (+)	NCBI		Celera
Cytogenetic Map	4	q23	NCBI

Rab19
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955494	2,878,562 - 2,885,808 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955494	2,878,562 - 2,885,766 (-)	NCBI	ChiLan1.0	ChiLan1.0

RAB19
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	6	177,201,128 - 177,223,109 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	7	29,211,382 - 29,233,363 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	7	132,345,288 - 132,367,298 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	7	144,824,042 - 144,844,761 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	7	144,824,042 - 144,844,761 (+)	Ensembl	panpan1.1		panPan2

Rab19
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	14,710,515 - 14,713,921 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936592	4,505,882 - 4,509,288 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

RAB19
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	18	9,364,451 - 9,384,083 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	18	9,367,239 - 9,391,097 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	18	9,880,441 - 9,898,173 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

RAB19
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	21	109,185,241 - 109,205,802 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	21	109,185,538 - 109,205,453 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666072	5,832,283 - 5,853,124 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Rab19
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624765	20,591,230 - 20,598,869 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624765	20,591,236 - 20,598,800 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in RAB19
213 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			4						4
Low	5		7		6		6		2		10
Below cutoff		5	10	6		6		4	6	8		6

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005629554	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022403738	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038452833	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038452834	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038497063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038497064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038497065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038497066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038559402	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038559403	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038559404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038559405	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038623382	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038623383	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038623384	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038623385	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038689101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038689102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038689103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038689104	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_539883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000021	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000104	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000006357 ⟹ ENSCAFP00000005887

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	16	8,544,804 - 8,562,346 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845055232 ⟹ ENSCAFP00845043440

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	16	8,465,559 - 8,483,792 (-)	Ensembl

RefSeq Acc Id:

XM_005629554 ⟹ XP_005629611

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	16	8,544,353 - 8,561,676 (-)	NCBI
Dog10K_Boxer_Tasha	16	9,388,399 - 9,405,746 (-)	NCBI

Sequence:

show sequence

TACAGTGATATGACACCGGAAGTGGAATGGCCTTTATTTGAAAAGCCAGAAGGGAAAGAGTGGT
TTCGTTGTGTCTTTTGTCTGCTGGGTCATTTGCCATAGGTGACTTCAGAGGCGTCCAAGAGAGG
TCTGTTCTAGGTGGCAGGAGCCATGCAATTCTCCAGCTCATCCAGAGCAGCAGATGAGAATTTT
GACTATTTGTTCAAGATTATCCTCATTGGGGACTCCAACGTGGGGAAGACGTGTGTGGTTCAGC
ATTTCAAATCTGGGGTCTACACAGAGACACAGCAGAACACGATTGGGGTGGACTTCACTGTGCG
CTCCCTTGAGATTGATGGCAAGAAAGTAAAGATGCAAGTGTGGGACACCGCAGGTCAGGAGCGC
TTCCGGACCATCACTCAAAGCTACTACCGCAGTGCCCACGCGGCCATCATCGCCTACGACCTCA
CCCGACGGTCCACCTTCGAGTCTGTTCCTCACTGGATCCACGAGATAGAAAAATACGGAGCGGC
AAACTTGGTCATTATGCTGATTGGGAACAAATGTGACCTGTGGGAAAAGCGGCACGTCCTGTTT
GAGGATGCCTGCACCCTGGCTGAGAAATACGGCCTCCTTGCTGTGTTAGAGACATCTGCCAAGG
AGTCTAAGAATGTAGACGAGGTCTTCACGCTGATGGCCAGGGAGCTGATCGCCCGCAACAGCCT
GCACTTACTTGGGGAGCGCACCCTGGACAGCCCGGCCCCGGATTCCAGGCCCGTCGTCCTGGCC
CAGGACCCGAAGGAGAAGACCCACTGCATGTGCTGAATATGTTCACGAGGCCGGTTGCACCCAC
CGGTGCCGCCTCTGACACCCAAGGCAGCCGGGTATCCTGCTGTCCACCACCTTACATCTCAGAC
CAAAGCCCAGACTTGGCGCTGGTCCTTAACCCTTCCCGCCCCATAGGGAGTAGTTTGCCTCGAT
TCACACCAGAGGCCAGACCTGCGGACTCAGTGAAGCAACACCACTGTTTCTCTCCATTCTGCTG
ATTCTACTTAGGACTCGGGGAGCAGGGGTAGGAAGACAGGTCTGCTCCACGTTATCCTTCCATT
TGTTCTCCCCAACCCTTCAACCATTTTCTACTGAATTTTGCTTCTCACTGGAAGAAGAGGGTAG
TGAAGGAAAGAATAAAGGAGGAATATCAAGAGAGGGGAGAGGATGTTTAGAACATTCCAGCTCA
GGCAGGAGGGATGGGAAAAAAGCCTGCAGTGATAAACTGTTAACTGTTGTTACCTTTTGCTTCC
TGATGGTCACACCTCAGGTCTTTTGTTTGGGGAGCAAAGCGTTTCACATAAAGACCATAAATAC
CGTCTTGCCAAATGGTCAAGAGCCATGTGATGGAGACAGAGGTGGATCTCTCTTTATCCTAGTT
GGGCTGATGTGACCACCCTCCTAGAATGTGGGAGATGCCTACGATTTCTTTCTAAAATACCAGA
TTAAAAAAATAATAAAAAAATACCAGATTATCTGCTGGATAAAAACTCACTTCTGAATTGAAAT
TCAGTTGGCTCAGAGATGAATATCAAGCCAGTATTGACCTCACTGTGTGGCCTGTGTGTGTGCT
GTGTATCCTCCAGAACCTGTGAGTAATAAACATTGTTTTTTCAAAGTTC

hide sequence

RefSeq Acc Id:

XM_038452833 ⟹ XP_038308761

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	16	9,388,399 - 9,406,742 (-)	NCBI

RefSeq Acc Id:

XM_038452834 ⟹ XP_038308762

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	16	9,388,399 - 9,406,743 (-)	NCBI

RefSeq Acc Id:

XM_038497063 ⟹ XP_038352991

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	16	8,416,377 - 8,434,727 (-)	NCBI

RefSeq Acc Id:

XM_038497064 ⟹ XP_038352992

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	16	8,416,377 - 8,434,441 (-)	NCBI

RefSeq Acc Id:

XM_038497065 ⟹ XP_038352993

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	16	8,416,377 - 8,434,728 (-)	NCBI

RefSeq Acc Id:

XM_038497066 ⟹ XP_038352994

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	16	8,416,377 - 8,433,730 (-)	NCBI

RefSeq Acc Id:

XM_038559402 ⟹ XP_038415330

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	16	8,329,152 - 8,347,507 (-)	NCBI

RefSeq Acc Id:

XM_038559403 ⟹ XP_038415331

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	16	8,329,152 - 8,347,221 (-)	NCBI

RefSeq Acc Id:

XM_038559404 ⟹ XP_038415332

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	16	8,329,152 - 8,347,508 (-)	NCBI

RefSeq Acc Id:

XM_038559405 ⟹ XP_038415333

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	16	8,329,152 - 8,346,508 (-)	NCBI

RefSeq Acc Id:

XM_038623382 ⟹ XP_038479310

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	16	8,260,776 - 8,279,090 (-)	NCBI

RefSeq Acc Id:

XM_038623383 ⟹ XP_038479311

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	16	8,260,776 - 8,278,804 (-)	NCBI

RefSeq Acc Id:

XM_038623384 ⟹ XP_038479312

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	16	8,260,776 - 8,279,091 (-)	NCBI

RefSeq Acc Id:

XM_038623385 ⟹ XP_038479313

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	16	8,260,776 - 8,278,099 (-)	NCBI

RefSeq Acc Id:

XM_038689101 ⟹ XP_038545029

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	16	8,465,402 - 8,483,791 (-)	NCBI

RefSeq Acc Id:

XM_038689102 ⟹ XP_038545030

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	16	8,465,402 - 8,483,505 (-)	NCBI

RefSeq Acc Id:

XM_038689103 ⟹ XP_038545031

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	16	8,465,402 - 8,483,792 (-)	NCBI

RefSeq Acc Id:

XM_038689104 ⟹ XP_038545032

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	16	8,465,402 - 8,482,792 (-)	NCBI

RefSeq Acc Id:

XM_539883 ⟹ XP_539883

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	16	8,544,353 - 8,562,712 (-)	NCBI
Dog10K_Boxer_Tasha	16	9,388,399 - 9,406,456 (-)	NCBI

Sequence:

show sequence

ATTTCCATTTCGCACATTGTAGCGTAACTGCCTACACTTACATCCTACATTTCGGAGAAAATCT
AGTACCTGAGATCTGACAAGTGGTGATTCTTCCAGATTCTGCGAGAGCAAAACTTAAGGAAAAC
TCACCTCAGCCTTCTGCTTCTGCTGCCAACAGGAGACTGATAAACTCAAGGTTTTCCAGACCTA
AAAATTAACCTTTGTTCTGCGGTAGACTTTTTTGAGGGAGGGAAACAGGAATGTTTTCCAGCTC
TCTCTTTTTGTGCAAGTTCAGAATTGTTTGGGGGTTTTGTTTTGTTTTTTGGTTTTTGGTTTTT
GGTTTTTGGTTTTTCATCTTCTCTTGGATCTCCTCCCTTCTCTCAGTGGCTCTTCAAAGAGAGT
TTTTCAAGTCCACGAAACAATGGAATGACTCAAGACCCAGATCTGTAACCTCCTTGACCTTGCC
GCCCTCTCAGCTAGCCGCCTCCCCCACCCCCAGCCAAACGAGGGACCCCAGGAAAAACTGGGGG
CAAAGGATGCAAATAAGAAGGGGAGTAGAGAGAAGGAAGGGGGAGCTAGGCGGCTAGTCCTGTT
CCTTCGGCTTTGCTGGGTGGCGATCGCGGGGCGGGAAGGCTGGCTGCGTGGGGAGTGCTGGCCA
GCGCCTCACCTGTGCTGCGCCCCGGGCTCGCGCTTTCCTTTCACTTTCTCAGGTCGCCAACCCC
CGACACCTGGGGACCCAGCGACAGCTTCCACCGCGGCCCCGGTGAGGCGGGAGGAGGAAAGGCA
CACGGAGGACGGAAAGGGAAAAAACTAGGAGCATAAAGTAAACATTACCTGCGAGCAGAGGTGA
GAGAGCGAGCCAGGTCTGTTCTAGGTGGCAGGAGCCATGCAATTCTCCAGCTCATCCAGAGCAG
CAGATGAGAATTTTGACTATTTGTTCAAGATTATCCTCATTGGGGACTCCAACGTGGGGAAGAC
GTGTGTGGTTCAGCATTTCAAATCTGGGGTCTACACAGAGACACAGCAGAACACGATTGGGGTG
GACTTCACTGTGCGCTCCCTTGAGATTGATGGCAAGAAAGTAAAGATGCAAGTGTGGGACACCG
CAGGTCAGGAGCGCTTCCGGACCATCACTCAAAGCTACTACCGCAGTGCCCACGCGGCCATCAT
CGCCTACGACCTCACCCGACGGTCCACCTTCGAGTCTGTTCCTCACTGGATCCACGAGATAGAA
AAATACGGAGCGGCAAACTTGGTCATTATGCTGATTGGGAACAAATGTGACCTGTGGGAAAAGC
GGCACGTCCTGTTTGAGGATGCCTGCACCCTGGCTGAGAAATACGGCCTCCTTGCTGTGTTAGA
GACATCTGCCAAGGAGTCTAAGAATGTAGACGAGGTCTTCACGCTGATGGCCAGGGAGCTGATC
GCCCGCAACAGCCTGCACTTACTTGGGGAGCGCACCCTGGACAGCCCGGCCCCGGATTCCAGGC
CCGTCGTCCTGGCCCAGGACCCGAAGGAGAAGACCCACTGCATGTGCTGAATATGTTCACGAGG
CCGGTTGCACCCACCGGTGCCGCCTCTGACACCCAAGGCAGCCGGGTATCCTGCTGTCCACCAC
CTTACATCTCAGACCAAAGCCCAGACTTGGCGCTGGTCCTTAACCCTTCCCGCCCCATAGGGAG
TAGTTTGCCTCGATTCACACCAGAGGCCAGACCTGCGGACTCAGTGAAGCAACACCACTGTTTC
TCTCCATTCTGCTGATTCTACTTAGGACTCGGGGAGCAGGGGTAGGAAGACAGGTCTGCTCCAC
GTTATCCTTCCATTTGTTCTCCCCAACCCTTCAACCATTTTCTACTGAATTTTGCTTCTCACTG
GAAGAAGAGGGTAGTGAAGGAAAGAATAAAGGAGGAATATCAAGAGAGGGGAGAGGATGTTTAG
AACATTCCAGCTCAGGCAGGAGGGATGGGAAAAAAGCCTGCAGTGATAAACTGTTAACTGTTGT
TACCTTTTGCTTCCTGATGGTCACACCTCAGGTCTTTTGTTTGGGGAGCAAAGCGTTTCACATA
AAGACCATAAATACCGTCTTGCCAAATGGTCAAGAGCCATGTGATGGAGACAGAGGTGGATCTC
TCTTTATCCTAGTTGGGCTGATGTGACCACCCTCCTAGAATGTGGGAGATGCCTACGATTTCTT
TCTAAAATACCAGATTAAAAAAATAATAAAAAAATACCAGATTATCTGCTGGATAAAAACTCAC
TTCTGAATTGAAATTCAGTTGGCTCAGAGATGAATATCAAGCCAGTATTGACCTCACTGTGTGG
CCTGTGTGTGTGCTGTGTATCCTCCAGAACCTGTGAGTAATAAACATTGTTTTTTCAAAGTTC

hide sequence

Protein Sequences


Protein RefSeqs	XP_005629611	(Get FASTA)	NCBI Sequence Viewer
	XP_038308761	(Get FASTA)	NCBI Sequence Viewer
	XP_038308762	(Get FASTA)	NCBI Sequence Viewer
	XP_038352991	(Get FASTA)	NCBI Sequence Viewer
	XP_038352992	(Get FASTA)	NCBI Sequence Viewer
	XP_038352993	(Get FASTA)	NCBI Sequence Viewer
	XP_038352994	(Get FASTA)	NCBI Sequence Viewer
	XP_038415330	(Get FASTA)	NCBI Sequence Viewer
	XP_038415331	(Get FASTA)	NCBI Sequence Viewer
	XP_038415332	(Get FASTA)	NCBI Sequence Viewer
	XP_038415333	(Get FASTA)	NCBI Sequence Viewer
	XP_038479310	(Get FASTA)	NCBI Sequence Viewer
	XP_038479311	(Get FASTA)	NCBI Sequence Viewer
	XP_038479312	(Get FASTA)	NCBI Sequence Viewer
	XP_038479313	(Get FASTA)	NCBI Sequence Viewer
	XP_038545029	(Get FASTA)	NCBI Sequence Viewer
	XP_038545030	(Get FASTA)	NCBI Sequence Viewer
	XP_038545031	(Get FASTA)	NCBI Sequence Viewer
	XP_038545032	(Get FASTA)	NCBI Sequence Viewer
	XP_539883	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000005887.2
	ENSCAFP00030009669.1
	ENSCAFP00040012679.1
	ENSCAFP00845043440
	ENSCAFP00845043440.1

RefSeq Acc Id:

XP_539883 ⟸ XM_539883

- UniProtKB:

A0A8C0MCH3 (UniProtKB/TrEMBL), A0A8C0LG21 (UniProtKB/TrEMBL), A0A8I3Q624 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQFSSSSRAADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLEIDGK
KVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLI
GNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNVDEVFTLMARELIARNSLHLLGERT
LDSPAPDSRPVVLAQDPKEKTHCMC

hide sequence

RefSeq Acc Id:

XP_005629611 ⟸ XM_005629554

- UniProtKB:

A0A8C0MCH3 (UniProtKB/TrEMBL), A0A8C0LG21 (UniProtKB/TrEMBL), A0A8I3Q624 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MQFSSSSRAADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLEIDGK
KVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESVPHWIHEIEKYGAANLVIMLI
GNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNVDEVFTLMARELIARNSLHLLGERT
LDSPAPDSRPVVLAQDPKEKTHCMC

hide sequence

RefSeq Acc Id:

ENSCAFP00000005887 ⟸ ENSCAFT00000006357

RefSeq Acc Id:

XP_038352993 ⟸ XM_038497065

RefSeq Acc Id:

XP_038352991 ⟸ XM_038497063

RefSeq Acc Id:

XP_038352992 ⟸ XM_038497064

RefSeq Acc Id:

XP_038352994 ⟸ XM_038497066

RefSeq Acc Id:

XP_038479312 ⟸ XM_038623384

RefSeq Acc Id:

XP_038479310 ⟸ XM_038623382

RefSeq Acc Id:

XP_038479311 ⟸ XM_038623383

RefSeq Acc Id:

XP_038479313 ⟸ XM_038623385

RefSeq Acc Id:	XP_038545031 ⟸ XM_038689103
- UniProtKB:	A0A8C0MCH3 (UniProtKB/TrEMBL), A0A8C0LG21 (UniProtKB/TrEMBL), A0A8I3Q624 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038545029 ⟸ XM_038689101
- UniProtKB:	A0A8C0MCH3 (UniProtKB/TrEMBL), A0A8C0LG21 (UniProtKB/TrEMBL), A0A8I3Q624 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038545030 ⟸ XM_038689102
- UniProtKB:	A0A8C0MCH3 (UniProtKB/TrEMBL), A0A8C0LG21 (UniProtKB/TrEMBL), A0A8I3Q624 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038545032 ⟸ XM_038689104
- UniProtKB:	A0A8C0MCH3 (UniProtKB/TrEMBL), A0A8C0LG21 (UniProtKB/TrEMBL), A0A8I3Q624 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038308762 ⟸ XM_038452834
- UniProtKB:	A0A8C0MCH3 (UniProtKB/TrEMBL), A0A8C0LG21 (UniProtKB/TrEMBL), A0A8I3Q624 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038308761 ⟸ XM_038452833
- UniProtKB:	A0A8C0MCH3 (UniProtKB/TrEMBL), A0A8C0LG21 (UniProtKB/TrEMBL), A0A8I3Q624 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038415332 ⟸ XM_038559404
- UniProtKB:	A0A8C0LG21 (UniProtKB/TrEMBL), A0A8C0MCH3 (UniProtKB/TrEMBL), A0A8I3Q624 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038415330 ⟸ XM_038559402
- UniProtKB:	A0A8C0LG21 (UniProtKB/TrEMBL), A0A8C0MCH3 (UniProtKB/TrEMBL), A0A8I3Q624 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038415331 ⟸ XM_038559403
- UniProtKB:	A0A8C0LG21 (UniProtKB/TrEMBL), A0A8C0MCH3 (UniProtKB/TrEMBL), A0A8I3Q624 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038415333 ⟸ XM_038559405
- UniProtKB:	A0A8C0LG21 (UniProtKB/TrEMBL), A0A8C0MCH3 (UniProtKB/TrEMBL), A0A8I3Q624 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845043440 ⟸ ENSCAFT00845055232

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000003959	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030006030	UniProtKB/TrEMBL
	ENSCAFG00040007878	UniProtKB/TrEMBL
	ENSCAFG00845031070	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000006357.4	UniProtKB/TrEMBL
	ENSCAFT00030011061.1	UniProtKB/TrEMBL
	ENSCAFT00040014660.1	UniProtKB/TrEMBL
	ENSCAFT00845055232	ENTREZGENE
	ENSCAFT00845055232.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.300	UniProtKB/TrEMBL
InterPro	P-loop_NTPase	UniProtKB/TrEMBL
	Rab19/43	UniProtKB/TrEMBL
	Small_GTP-bd_dom	UniProtKB/TrEMBL
	Small_GTPase	UniProtKB/TrEMBL
KEGG Report	cfa:482767	UniProtKB/TrEMBL
NCBI Gene	RAB19	ENTREZGENE
PANTHER	RAB43, MEMBER RAS ONCOGENE FAMILY	UniProtKB/TrEMBL
	RAS-RELATED PROTEIN RAB	UniProtKB/TrEMBL
Pfam	Ras	UniProtKB/TrEMBL
PRINTS	RASTRNSFRMNG	UniProtKB/TrEMBL
PROSITE	RAB	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
SMART	ARF	UniProtKB/TrEMBL
	RAB	UniProtKB/TrEMBL
	RAN	UniProtKB/TrEMBL
	RAS	UniProtKB/TrEMBL
	RHO	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A8C0LG21	ENTREZGENE
	A0A8C0MCH3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3Q624	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:45258	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar