WDSUB1 (WD repeat, sterile alpha motif and U-box domain containing 1) - Rat Genome Database

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Gene: WDSUB1 (WD repeat, sterile alpha motif and U-box domain containing 1) Canis lupus familiaris
Analyze
Symbol: WDSUB1
Name: WD repeat, sterile alpha motif and U-box domain containing 1
RGD ID: 12109197
Description: ENCODES a protein that exhibits ubiquitin-protein transferase activity (inferred); INVOLVED IN protein ubiquitination (inferred); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: WD repeat, SAM and U-box domain-containing protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1365,024,832 - 5,073,448 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl365,024,838 - 5,072,660 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha365,163,963 - 5,212,566 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0365,147,634 - 5,196,280 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl365,147,638 - 5,195,807 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1365,165,806 - 5,214,445 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0365,208,453 - 5,257,031 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0365,251,126 - 5,299,744 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
WDSUB1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1365,024,832 - 5,073,448 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl365,024,838 - 5,072,660 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha365,163,963 - 5,212,566 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0365,147,634 - 5,196,280 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl365,147,638 - 5,195,807 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1365,165,806 - 5,214,445 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0365,208,453 - 5,257,031 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0365,251,126 - 5,299,744 (-)NCBIUU_Cfam_GSD_1.0
WDSUB1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382159,235,798 - 159,286,703 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2159,235,798 - 159,286,703 (-)EnsemblGRCh38hg38GRCh38
GRCh372160,092,309 - 160,143,214 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362159,800,558 - 159,851,309 (-)NCBINCBI36Build 36hg18NCBI36
Build 342159,917,818 - 159,968,570NCBI
Celera2153,706,784 - 153,757,716 (-)NCBICelera
Cytogenetic Map2q24.2NCBI
HuRef2151,978,632 - 152,029,368 (-)NCBIHuRef
CHM1_12160,098,495 - 160,149,376 (-)NCBICHM1_1
T2T-CHM13v2.02159,695,595 - 159,746,544 (-)NCBIT2T-CHM13v2.0
Wdsub1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39259,682,708 - 59,714,700 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl259,682,708 - 59,712,935 (-)EnsemblGRCm39 Ensembl
GRCm38259,852,364 - 59,882,620 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl259,852,364 - 59,882,591 (-)EnsemblGRCm38mm10GRCm38
MGSCv37259,690,421 - 59,720,663 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36259,653,203 - 59,683,423 (-)NCBIMGSCv36mm8
Celera261,547,996 - 61,578,237 (-)NCBICelera
Cytogenetic Map2C1.1NCBI
cM Map234.14NCBI
Wdsub1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8364,749,118 - 64,781,525 (-)NCBIGRCr8
mRatBN7.2344,340,415 - 44,370,890 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl344,340,415 - 44,370,891 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx347,696,666 - 47,727,022 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0356,280,233 - 56,310,589 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0354,050,349 - 54,080,704 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0345,924,979 - 45,955,455 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl345,925,008 - 45,955,449 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0351,036,799 - 51,073,466 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4341,572,560 - 41,602,917 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1341,468,954 - 41,499,289 (-)NCBI
Celera342,386,424 - 42,415,974 (-)NCBICelera
Cytogenetic Map3q21NCBI
Wdsub1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495544914,301,798 - 14,348,735 (+)NCBIChiLan1.0ChiLan1.0
WDSUB1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21361,923,297 - 61,974,822 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B61,938,730 - 61,990,233 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B46,523,789 - 46,575,379 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B163,898,555 - 163,949,053 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B163,898,555 - 163,949,053 (-)Ensemblpanpan1.1panPan2
Wdsub1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303122,191,055 - 122,231,300 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493646919,386,300 - 19,426,265 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493646919,386,431 - 19,427,349 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
WDSUB1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1566,166,450 - 66,239,190 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11566,165,201 - 66,239,203 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
WDSUB1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11044,619,307 - 44,671,975 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1044,618,261 - 44,671,900 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040154,893,120 - 154,942,096 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Wdsub1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247326,372,366 - 6,415,675 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247326,372,413 - 6,415,943 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in WDSUB1
408 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 2 18 2 6 2 6 9 8 10 6
Low 3 4 4 4 6 3
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005640207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005640208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022414713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022414714 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038446830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038520910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038584593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038584594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038584595 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038584596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038584597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038649017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_535926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000039730   ⟹   ENSCAFP00000035619
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl365,025,056 - 5,072,660 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000062105   ⟹   ENSCAFP00000061632
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl365,025,074 - 5,072,660 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000069643   ⟹   ENSCAFP00000064276
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl365,024,838 - 5,072,660 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000076230   ⟹   ENSCAFP00000059156
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl365,034,962 - 5,071,530 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000088490   ⟹   ENSCAFP00000053013
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl365,035,850 - 5,071,530 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845049392   ⟹   ENSCAFP00845038754
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl365,147,638 - 5,195,807 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845049469   ⟹   ENSCAFP00845038813
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl365,147,638 - 5,195,807 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845049500   ⟹   ENSCAFP00845038835
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl365,147,876 - 5,195,807 (-)Ensembl
RefSeq Acc Id: XM_005640207   ⟹   XP_005640264
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1365,024,832 - 5,072,477 (-)NCBI
Dog10K_Boxer_Tasha365,163,963 - 5,211,576 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005640208   ⟹   XP_005640265
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1365,024,832 - 5,072,954 (-)NCBI
Dog10K_Boxer_Tasha365,163,963 - 5,212,068 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022414713   ⟹   XP_022270421
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1365,024,832 - 5,073,448 (-)NCBI
Dog10K_Boxer_Tasha365,163,963 - 5,212,566 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022414714   ⟹   XP_022270422
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1365,024,832 - 5,068,846 (-)NCBI
Dog10K_Boxer_Tasha365,163,963 - 5,207,730 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038446826   ⟹   XP_038302754
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0365,147,634 - 5,195,782 (-)NCBI
RefSeq Acc Id: XM_038446827   ⟹   XP_038302755
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0365,147,634 - 5,196,280 (-)NCBI
RefSeq Acc Id: XM_038446828   ⟹   XP_038302756
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0365,147,634 - 5,195,293 (-)NCBI
RefSeq Acc Id: XM_038446829   ⟹   XP_038302757
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0365,147,634 - 5,195,782 (-)NCBI
RefSeq Acc Id: XM_038446830   ⟹   XP_038302758
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0365,147,634 - 5,191,436 (-)NCBI
RefSeq Acc Id: XM_038520906   ⟹   XP_038376834
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1365,165,806 - 5,213,947 (-)NCBI
RefSeq Acc Id: XM_038520907   ⟹   XP_038376835
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1365,165,806 - 5,214,445 (-)NCBI
RefSeq Acc Id: XM_038520908   ⟹   XP_038376836
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1365,165,806 - 5,213,457 (-)NCBI
RefSeq Acc Id: XM_038520909   ⟹   XP_038376837
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1365,165,806 - 5,213,947 (-)NCBI
RefSeq Acc Id: XM_038520910   ⟹   XP_038376838
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1365,165,806 - 5,209,601 (-)NCBI
RefSeq Acc Id: XM_038584593   ⟹   XP_038440521
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0365,251,126 - 5,299,246 (-)NCBI
RefSeq Acc Id: XM_038584594   ⟹   XP_038440522
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0365,251,126 - 5,299,744 (-)NCBI
RefSeq Acc Id: XM_038584595   ⟹   XP_038440523
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0365,251,126 - 5,298,777 (-)NCBI
RefSeq Acc Id: XM_038584596   ⟹   XP_038440524
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0365,251,126 - 5,299,246 (-)NCBI
RefSeq Acc Id: XM_038584597   ⟹   XP_038440525
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0365,251,126 - 5,295,138 (-)NCBI
RefSeq Acc Id: XM_038649011   ⟹   XP_038504939
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0365,208,453 - 5,256,533 (-)NCBI
RefSeq Acc Id: XM_038649012   ⟹   XP_038504940
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0365,208,453 - 5,257,031 (-)NCBI
RefSeq Acc Id: XM_038649013   ⟹   XP_038504941
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0365,208,453 - 5,256,065 (-)NCBI
RefSeq Acc Id: XM_038649014   ⟹   XP_038504942
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0365,208,453 - 5,256,533 (-)NCBI
RefSeq Acc Id: XM_038649015   ⟹   XP_038504943
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0365,208,453 - 5,256,533 (-)NCBI
RefSeq Acc Id: XM_038649016   ⟹   XP_038504944
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0365,208,453 - 5,254,879 (-)NCBI
RefSeq Acc Id: XM_038649017   ⟹   XP_038504945
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0365,208,453 - 5,252,241 (-)NCBI
RefSeq Acc Id: XM_535926   ⟹   XP_535926
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1365,024,832 - 5,072,954 (-)NCBI
Dog10K_Boxer_Tasha365,163,963 - 5,212,068 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005640264 (Get FASTA)   NCBI Sequence Viewer  
  XP_005640265 (Get FASTA)   NCBI Sequence Viewer  
  XP_022270421 (Get FASTA)   NCBI Sequence Viewer  
  XP_022270422 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302754 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302755 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302756 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302757 (Get FASTA)   NCBI Sequence Viewer  
  XP_038302758 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376834 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376835 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376836 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376837 (Get FASTA)   NCBI Sequence Viewer  
  XP_038376838 (Get FASTA)   NCBI Sequence Viewer  
  XP_038440521 (Get FASTA)   NCBI Sequence Viewer  
  XP_038440522 (Get FASTA)   NCBI Sequence Viewer  
  XP_038440523 (Get FASTA)   NCBI Sequence Viewer  
  XP_038440524 (Get FASTA)   NCBI Sequence Viewer  
  XP_038440525 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504939 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504940 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504941 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504942 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504943 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504944 (Get FASTA)   NCBI Sequence Viewer  
  XP_038504945 (Get FASTA)   NCBI Sequence Viewer  
  XP_535926 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000035619.2
  ENSCAFP00000059156.2
  ENSCAFP00000064276.1
  ENSCAFP00030017403.1
  ENSCAFP00030017514.1
  ENSCAFP00030017658.1
  ENSCAFP00040032520.1
  ENSCAFP00040032563.1
  ENSCAFP00040032626.1
  ENSCAFP00040032656.1
  ENSCAFP00845038754
  ENSCAFP00845038754.1
  ENSCAFP00845038813.1
  ENSCAFP00845038835.1
Reference Protein Sequences
RefSeq Acc Id: XP_005640265   ⟸   XM_005640208
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_535926   ⟸   XM_535926
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JZJ2 (UniProtKB/TrEMBL),   A0A8C0Z2W4 (UniProtKB/TrEMBL),   A0A8I3Q2H6 (UniProtKB/TrEMBL),   A0A8C0T8U3 (UniProtKB/TrEMBL),   A0A8I3QF51 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005640264   ⟸   XM_005640207
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JZJ2 (UniProtKB/TrEMBL),   A0A8C0Z2W4 (UniProtKB/TrEMBL),   A0A8I3Q2H6 (UniProtKB/TrEMBL),   A0A8C0T8U3 (UniProtKB/TrEMBL),   A0A8I3QF51 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022270421   ⟸   XM_022414713
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JZJ2 (UniProtKB/TrEMBL),   A0A8C0Z2W4 (UniProtKB/TrEMBL),   A0A8I3Q2H6 (UniProtKB/TrEMBL),   A0A8C0T8U3 (UniProtKB/TrEMBL),   A0A8I3QF51 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022270422   ⟸   XM_022414714
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSCAFP00000035619   ⟸   ENSCAFT00000039730
RefSeq Acc Id: ENSCAFP00000053013   ⟸   ENSCAFT00000088490
RefSeq Acc Id: ENSCAFP00000064276   ⟸   ENSCAFT00000069643
RefSeq Acc Id: ENSCAFP00000059156   ⟸   ENSCAFT00000076230
RefSeq Acc Id: ENSCAFP00000061632   ⟸   ENSCAFT00000062105
RefSeq Acc Id: XP_038376835   ⟸   XM_038520907
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038376837   ⟸   XM_038520909
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038376834   ⟸   XM_038520906
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038376836   ⟸   XM_038520908
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038376838   ⟸   XM_038520910
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038504940   ⟸   XM_038649012
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504943   ⟸   XM_038649015
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038504942   ⟸   XM_038649014
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038504939   ⟸   XM_038649011
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504941   ⟸   XM_038649013
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038504944   ⟸   XM_038649016
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038504945   ⟸   XM_038649017
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038302755   ⟸   XM_038446827
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JZJ2 (UniProtKB/TrEMBL),   A0A8C0Z2W4 (UniProtKB/TrEMBL),   A0A8I3Q2H6 (UniProtKB/TrEMBL),   A0A8C0T8U3 (UniProtKB/TrEMBL),   A0A8I3QF51 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038302757   ⟸   XM_038446829
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038302754   ⟸   XM_038446826
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JZJ2 (UniProtKB/TrEMBL),   A0A8C0Z2W4 (UniProtKB/TrEMBL),   A0A8I3Q2H6 (UniProtKB/TrEMBL),   A0A8C0T8U3 (UniProtKB/TrEMBL),   A0A8I3QF51 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038302756   ⟸   XM_038446828
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JZJ2 (UniProtKB/TrEMBL),   A0A8C0Z2W4 (UniProtKB/TrEMBL),   A0A8I3Q2H6 (UniProtKB/TrEMBL),   A0A8C0T8U3 (UniProtKB/TrEMBL),   A0A8I3QF51 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038302758   ⟸   XM_038446830
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038440522   ⟸   XM_038584594
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JZJ2 (UniProtKB/TrEMBL),   A0A8C0T8U3 (UniProtKB/TrEMBL),   A0A8C0Z2W4 (UniProtKB/TrEMBL),   A0A8I3Q2H6 (UniProtKB/TrEMBL),   A0A8I3QF51 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038440524   ⟸   XM_038584596
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038440521   ⟸   XM_038584593
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JZJ2 (UniProtKB/TrEMBL),   A0A8C0T8U3 (UniProtKB/TrEMBL),   A0A8C0Z2W4 (UniProtKB/TrEMBL),   A0A8I3Q2H6 (UniProtKB/TrEMBL),   A0A8I3QF51 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038440523   ⟸   XM_038584595
- Peptide Label: isoform X1
- UniProtKB: A0A8C0JZJ2 (UniProtKB/TrEMBL),   A0A8C0T8U3 (UniProtKB/TrEMBL),   A0A8C0Z2W4 (UniProtKB/TrEMBL),   A0A8I3Q2H6 (UniProtKB/TrEMBL),   A0A8I3QF51 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038440525   ⟸   XM_038584597
- Peptide Label: isoform X3
RefSeq Acc Id: ENSCAFP00845038835   ⟸   ENSCAFT00845049500
RefSeq Acc Id: ENSCAFP00845038813   ⟸   ENSCAFT00845049469
RefSeq Acc Id: ENSCAFP00845038754   ⟸   ENSCAFT00845049392
Protein Domains
SAM   U-box


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000009375 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030010791 UniProtKB/TrEMBL
  ENSCAFG00040020176 UniProtKB/TrEMBL
  ENSCAFG00845027961 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000039730.4 UniProtKB/TrEMBL
  ENSCAFT00000069643.2 UniProtKB/TrEMBL
  ENSCAFT00000076230.2 UniProtKB/TrEMBL
  ENSCAFT00030019968.1 UniProtKB/TrEMBL
  ENSCAFT00030020087.1 UniProtKB/TrEMBL
  ENSCAFT00030020249.1 UniProtKB/TrEMBL
  ENSCAFT00040037317.1 UniProtKB/TrEMBL
  ENSCAFT00040037366.1 UniProtKB/TrEMBL
  ENSCAFT00040037433.1 UniProtKB/TrEMBL
  ENSCAFT00040037463.1 UniProtKB/TrEMBL
  ENSCAFT00845049392 ENTREZGENE
  ENSCAFT00845049392.1 UniProtKB/TrEMBL
  ENSCAFT00845049469.1 UniProtKB/TrEMBL
  ENSCAFT00845049500.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.50 UniProtKB/TrEMBL
  2.130.10.10 UniProtKB/TrEMBL
  3.30.40.10 UniProtKB/TrEMBL
InterPro G-protein_beta_WD-40_rep UniProtKB/TrEMBL
  Quinoprotein_ADH-like_supfam UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
  SAM/pointed_sf UniProtKB/TrEMBL
  Ubox_domain UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/TrEMBL
  WD40_repeat UniProtKB/TrEMBL
  WD40_repeat_CS UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
KEGG Report cfa:478761 UniProtKB/TrEMBL
NCBI Gene WDSUB1 ENTREZGENE
PANTHER WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
  WD REPEAT, SAM AND U-BOX DOMAIN-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
Pfam SAM_1 UniProtKB/TrEMBL
  SAM_2 UniProtKB/TrEMBL
  U-box UniProtKB/TrEMBL
  WD40 UniProtKB/TrEMBL
PRINTS GPROTEINBRPT UniProtKB/TrEMBL
PROSITE SAM_DOMAIN UniProtKB/TrEMBL
  U_BOX UniProtKB/TrEMBL
  WD_REPEATS_1 UniProtKB/TrEMBL
  WD_REPEATS_2 UniProtKB/TrEMBL
  WD_REPEATS_REGION UniProtKB/TrEMBL
SMART SAM UniProtKB/TrEMBL
  Ubox UniProtKB/TrEMBL
  WD40 UniProtKB/TrEMBL
Superfamily-SCOP RING/U-box UniProtKB/TrEMBL
  SSF47769 UniProtKB/TrEMBL
  SSF50978 UniProtKB/TrEMBL
  SSF50998 UniProtKB/TrEMBL
UniProt A0A8C0JZJ2 ENTREZGENE
  A0A8C0RHC8_CANLF UniProtKB/TrEMBL
  A0A8C0T8U3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TA56_CANLF UniProtKB/TrEMBL
  A0A8C0Z2W4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PUQ7_CANLF UniProtKB/TrEMBL
  A0A8I3Q2H6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3QF51 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:48399 ENTREZGENE