ELOVL4 (ELOVL fatty acid elongase 4)

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer VCMap Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

Gene: ELOVL4 (ELOVL fatty acid elongase 4) Canis lupus familiaris

Analyze

Symbol:

ELOVL4

Name:

ELOVL fatty acid elongase 4

RGD ID:

12104806

Description:

ENCODES a protein that exhibits fatty acid elongase activity (inferred); transferase activity (inferred); very-long-chain 3-ketoacyl-CoA synthase activity (inferred); INVOLVED IN cellular biosynthetic process (inferred); cellular lipid metabolic process (inferred); fatty acid biosynthetic process (inferred); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH corneal dystrophy (ortholog); fundus dystrophy (ortholog); Ichthyosis, Spastic Quadriplegia, and Mental Retardation (ortholog); FOUND IN integral component of endoplasmic reticulum membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4; elongation of very long chain fatty acids protein 4

RGD Orthologs

Human

Mouse

Rat

Chinchilla

Bonobo

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	40,845,357 - 40,876,658 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	40,846,202 - 40,876,758 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	40,717,528 - 40,748,986 (-)	NCBI
ROS_Cfam_1.0	12	41,608,796 - 41,640,301 (-)	NCBI
ROS_Cfam_1.0 Ensembl	12	41,608,796 - 41,640,369 (-)	Ensembl
UMICH_Zoey_3.1	12	40,922,521 - 40,953,970 (-)	NCBI
UNSW_CanFamBas_1.0	12	40,898,942 - 40,930,398 (-)	NCBI
UU_Cfam_GSD_1.0	12	41,049,872 - 41,081,359 (-)	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

corneal dystrophy (ISO)

fundus dystrophy (ISO)

Ichthyosis, Spastic Quadriplegia, and Mental Retardation (ISO)

spastic ataxia (ISO)

spinocerebellar ataxia type 34 (ISO)

Stargardt Disease 3 (ISO)

Stargardt Disease 4 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular biosynthetic process (IEA)

cellular lipid metabolic process (IEA)

fatty acid biosynthetic process (IEA)

fatty acid elongation, monounsaturated fatty acid (IBA)

fatty acid elongation, polyunsaturated fatty acid (IBA,IEA)

fatty acid elongation, saturated fatty acid (IBA,IEA)

fatty acid metabolic process (IEA)

lipid biosynthetic process (IEA)

lipid metabolic process (IEA)

long-chain fatty-acyl-CoA biosynthetic process (IEA)

sphingolipid biosynthetic process (IBA)

unsaturated fatty acid biosynthetic process (IEA)

very long-chain fatty acid biosynthetic process (IBA,IEA)

Cellular Component

endoplasmic reticulum (IEA)

endoplasmic reticulum membrane (IEA)

integral component of endoplasmic reticulum membrane (IBA,ISO)

integral component of membrane (IEA)

membrane (IEA)

Molecular Function

fatty acid elongase activity (IBA,IEA)

protein binding (ISO)

transferase activity (IEA)

very-long-chain 3-ketoacyl-CoA synthase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

alpha-linolenic acid metabolic pathway (ISO)

linoleic acid metabolic pathway (ISO)

References

Genomics

Comparative Map Data

ELOVL4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	40,845,357 - 40,876,658 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	40,846,202 - 40,876,758 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	40,717,528 - 40,748,986 (-)	NCBI
ROS_Cfam_1.0	12	41,608,796 - 41,640,301 (-)	NCBI
ROS_Cfam_1.0 Ensembl	12	41,608,796 - 41,640,369 (-)	Ensembl
UMICH_Zoey_3.1	12	40,922,521 - 40,953,970 (-)	NCBI
UNSW_CanFamBas_1.0	12	40,898,942 - 40,930,398 (-)	NCBI
UU_Cfam_GSD_1.0	12	41,049,872 - 41,081,359 (-)	NCBI

ELOVL4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	79,914,814 - 79,947,553 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	6	79,914,814 - 79,947,553 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	80,624,531 - 80,657,270 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	80,681,248 - 80,713,941 (-)	NCBI	NCBI36		hg18	NCBI36
Build 34	6	80,681,248 - 80,713,941	NCBI
Celera	6	81,042,504 - 81,075,295 (-)	NCBI
Cytogenetic Map	6	q14.1	NCBI
HuRef	6	77,847,380 - 77,880,171 (-)	NCBI		HuRef
CHM1_1	6	80,722,020 - 80,754,791 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	81,123,209 - 81,155,949 (-)	NCBI

Elovl4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	83,660,745 - 83,688,358 (-)	NCBI	GRCm39		mm39
GRCm39 Ensembl	9	83,660,745 - 83,688,330 (-)	Ensembl
GRCm38	9	83,778,692 - 83,806,305 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	83,778,692 - 83,806,277 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	83,672,299 - 83,699,912 (-)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	9	83,575,410 - 83,602,818 (-)	NCBI			mm8
Celera	9	80,877,487 - 80,906,281 (-)	NCBI		Celera
Cytogenetic Map	9	E2	NCBI

Elovl4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	8	84,702,916 - 84,729,466 (-)	NCBI	mRatBN7.2
mRatBN7.2 Ensembl	8	84,702,362 - 84,729,697 (-)	Ensembl
Rnor_6.0	8	91,310,690 - 91,338,625 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	91,310,630 - 91,338,843 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	90,830,571 - 90,857,120 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	88,855,155 - 88,881,703 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	8	88,873,228 - 88,901,172 (-)	NCBI
Celera	8	84,351,953 - 84,378,505 (-)	NCBI		Celera
Cytogenetic Map	8	q31	NCBI

Elovl4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955502	7,764,359 - 7,774,572 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955502	7,764,451 - 7,774,503 (-)	NCBI	ChiLan1.0	ChiLan1.0

ELOVL4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	6	81,068,876 - 81,101,644 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	81,068,882 - 81,102,050 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	6	77,798,058 - 77,830,840 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

Elovl4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	76,194,846 - 76,224,005 (-)	NCBI
SpeTri2.0	NW_004936510	10,246,901 - 10,276,049 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ELOVL4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	86,163,868 - 86,195,987 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	86,163,845 - 86,196,036 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	96,867,779 - 96,896,868 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ELOVL4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	4,652,674 - 4,687,308 (-)	NCBI	ChlSab1.1		chlSab2
ChlSab1.1 Ensembl	13	4,652,677 - 4,687,294 (-)	Ensembl	ChlSab1.1		chlSab2
Vero_WHO_p1.0	NW_023666040	180,883,243 - 180,916,132 (-)	NCBI	Vero_WHO_p1.0

Elovl4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624819	6,572,161 - 6,602,072 (-)	Ensembl	HetGla_female_1.0		hetGla2
HetGla 1.0	NW_004624819	6,572,263 - 6,601,991 (-)	NCBI	HetGla_female_1.0		hetGla2

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			8				6		12	8
Low	2		8		1						6	2
Below cutoff	3	5	4	4	5	4		5			4	4

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022426279	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492304	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038492305	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038554597	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038554598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038618454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038618455	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038684019	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_539015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000125	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSCAFT00000047184 ⟹ ENSCAFP00000043098

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	12	40,846,202 - 40,876,758 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845016255 ⟹ ENSCAFP00845012645

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	12	41,608,796 - 41,640,369 (-)	Ensembl

RefSeq Acc Id:

XM_022426279 ⟹ XP_022281987

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	12	40,845,357 - 40,876,170 (-)	NCBI
Dog10K_Boxer_Tasha	12	40,717,528 - 40,748,371 (-)	NCBI

Sequence:

show sequence

CCTCAGCTCCTCGGATGCTGGAGCTGACATATCAGATGGAGCCGGTGCTGCTAAGAGCTCGGCG
CAAGAACCACTCCGCCCTGCTATAAACGTGTGGAGAATTGGCCTCTGATGCAGTCCCCATTGCC
TACACTTTGTATAAGTACTCTTTACCTCCTGTTTGTGTGGCTGGGTCCAAAATGGATGAAGGAC
CGAGAACCTTTCCAGATGCGTTTAGTGCTCATTATCTATAATTTTGGGATGGTTTTGCTTAACC
TTTTTATCTTCAGAGAGTTATTCATGGGATCATATAATGCAGGATATAGCTATATTTGCCAGAG
TGTGGATTATTCTGATAATGTTAATGAAGTTAGGATAGCTGCTGCTCTTTGGTGGTACTTTGTA
TCAAAAGGGGTTGAGTATTTGGATACTGTATTTTTTATCCTAAGGAAGAAAAACAACCAAGTCT
CTTTCCTTCATGTATACCATCACTGTACAATGTTTACATTGTGGTGGATTGGAATTAAGTGGGT
CGCAGGGGGACAAGCATTTTTTGGAGCACAGCTGAATTCCTTCATCCACGTGATTATGTACTCA
TACTATGGGTTAACTGCATTTGGCCCGTGGATTCAGAAGTATCTTTGGTGGAAACGATACTTAA
CCATGTTGCAGCTGGTTCAGTTCCACGTGACCATTGGGCACACGGCGCTGTCTCTTTACACTGA
TTGCCCCTTCCCAAAATGGATGCACTGGGCTCTCATCGCCTATGCAATCAGCTTCATATTTCTC
TTTCTTAACTTCTATGTTCGGACATACAAAGAGCCTAAGAAAGCAAAAACTGGAAAAACAGCTG
TGAATGGTATTTCAGCAAATGGTGTGAGCAAATCAGAGAAACAACTAGTGATAGAAAATGGAAA
AAAGCAGAAAAATGGAAAAGCGAAAGGAGAGTAAATTGAACTGGGCCTTAACTGTTGTTGACAG
TGAGGAAGCTCCCATTTCATATAAAATTTCAGGGAAAACAAGCAAATGAGGGTTTTGGGGGTGG
GGAGAAAAAGGCAAATGTGCTCTATGTCTTAGTAACCTTTAGATAGAGTAAAGTGTTAAATACA
ATGCCCGGATGTTTTATTTATGAAGTTTTATTTTAAACATTTTTTTTTTATTAGCCTTGTTGTC
GTCCAGACCAAAGCAATCATTATGTGACTTTGGAGGCTCTCCCTCTGTTCACATCCGTTTGTCT
AATGCATGACATTTTTCATGTATCTTATATACAGTCATTCTTCAGTCTGATGATCACAGAAACA
CAGTATGAATTTTTTGGCTAAATTACTATTACCTACTGATTACAATCAGTTACCTTACATTTTC
TAGTCCAAAGCTGGAACTGTAGATACTTTAAAATTTGCACATTTGAATTCATTTGCTGACTGGT
ATGGTCAAATCTCTCCACCTCTAGTCTGAATATACCCTTTTGGTTGTAATTAAATTTAAAGAAT
CTGATGATCTCTGTAGACTCTTAGAGGCTTGACGATGATGGTGTTGGTGAAAATAAGAATTACA
GTAAAATCCTGTCTAGTGACCCAAAGGTCACCATGACTTGCGGCACAAATCACTGTGGGAAACA
ATTTTTGATGAAAAGACAGCCTTTCAATACTCCTATTACTATCAGAAGTATATTATGAAAATTA
GGATTATTGTCTGATTGGAACATGAAACAACTCATATCTTTATAAGTAACATCAGAAAAGAGTT
ACATTTATGTGCTGTTAGAAGAGAGTATGTTGATTTTTATCAGGCTTTCCTTGTTTTGATTTGT
GGCTGTTACCGATTTTTCATATGTGGAAATATACCTACCTCTTCTGTTGGAAAGAACATTTAAA
ATTAAATAAATTTTAATTAAAAAATCAAGGAGTCCTCTAATGTAAATTTTACTATTAGCTTTCG
AATCCGCTAGTATTTTTTTTGCCTTTTTTTTCTTTTTTTTTAACAAATAGCATACACCCAACTT
TTCTGTGAAACTATCCTTCTCTTTCAATGTGATTAATTTTGGAGTGATATTTTCCTTATAACAA
AGTTGCAAGATCTTATTTATTAACTAGATATGAAGTATAAACCCATTTTGGTGCAATATTCTTG
ACTCCTTGGTGCTAAAGATCATTAAATTTAGTGTATGATTGTTACAAGGTGTTAATTATTAAGA
CACAAAATGAATTAAAGTGAAGAGTAGTCAGAACCAGAAAATGAAGTTTACTATGTGTAAATGG
AGTGTTTCATGTAATATAAATGAACAACTGGAAATACACTAGGAAAGAGAACTTGTACATTGTT
TTATTACATTGGTTAAATTGTTAGGGGATGTTGACCAGGGATCATTATAGAGAAAGAAAATGTG
ACAACAACAAAAAAAGCATGAATATTTCTAAGTTATCTCAACATGTCAAAACTGCATGTACAGG
ATGTATGCTGTTTGTGCAGACGAACTATTTTAGAGTATTTTGTAAACTATAAAATATTTATTGT
GCATTAAAATTACACTTTTCCCCAAAGGCATGCAGTCATGAGAAATATAGAATATTTGCAACAT
TTAAAATAGTTTGGCCTGAGAGGATTCAGCACCTTTGTCTTAGCTGCTCGGTGTGTAATGACTA
GAGATTTGTAAATCTTTGTGAACATTCTGTACTGGTTCCCCAGACCTCTTCATTCCCTGCTACC
TGATTTTAGCACAATAAATATACAACTGCTGTGGGAAAAA

hide sequence

RefSeq Acc Id:

XM_038492304 ⟹ XP_038348232

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	12	40,922,521 - 40,953,970 (-)	NCBI

RefSeq Acc Id:

XM_038492305 ⟹ XP_038348233

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	12	40,922,521 - 40,953,341 (-)	NCBI

RefSeq Acc Id:

XM_038554597 ⟹ XP_038410525

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	12	41,049,872 - 41,081,359 (-)	NCBI

RefSeq Acc Id:

XM_038554598 ⟹ XP_038410526

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	12	41,049,872 - 41,080,726 (-)	NCBI

RefSeq Acc Id:

XM_038618454 ⟹ XP_038474382

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	12	40,898,942 - 40,930,398 (-)	NCBI

RefSeq Acc Id:

XM_038618455 ⟹ XP_038474383

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	12	40,898,942 - 40,929,759 (-)	NCBI

RefSeq Acc Id:

XM_038684018 ⟹ XP_038539946

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	12	41,608,796 - 41,640,301 (-)	NCBI

RefSeq Acc Id:

XM_038684019 ⟹ XP_038539947

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	12	41,608,796 - 41,639,670 (-)	NCBI

RefSeq Acc Id:

XM_539015 ⟹ XP_539015

RefSeq Status:

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	12	40,845,357 - 40,876,658 (-)	NCBI
Dog10K_Boxer_Tasha	12	40,717,528 - 40,748,986 (-)	NCBI

Sequence:

show sequence

GAGAAGACGCCCGCGGGGCCGCCGCCGTGAGAGGGGAGCCCGGCTGCCGCTCGCTCCGCCGGCC
GTCGCCTCCGAGGTCCACCCTCCCGGGGTGTCTCCCTTTCTCCTCCCCGCGCTCTGCCGCCGGC
GCCCGCTTCCTGCCGAGATGGGGCTCCTGGACTCGGAGCCGGGCAGTGTCCTCAACGTGGTGTC
CACGGCGCTGAACGACACCGTGGAGTTCTACCGCTGGACCTGGTCCATCACAGATAAACGTGTG
GAGAATTGGCCTCTGATGCAGTCCCCATTGCCTACACTTTGTATAAGTACTCTTTACCTCCTGT
TTGTGTGGCTGGGTCCAAAATGGATGAAGGACCGAGAACCTTTCCAGATGCGTTTAGTGCTCAT
TATCTATAATTTTGGGATGGTTTTGCTTAACCTTTTTATCTTCAGAGAGTTATTCATGGGATCA
TATAATGCAGGATATAGCTATATTTGCCAGAGTGTGGATTATTCTGATAATGTTAATGAAGTTA
GGATAGCTGCTGCTCTTTGGTGGTACTTTGTATCAAAAGGGGTTGAGTATTTGGATACTGTATT
TTTTATCCTAAGGAAGAAAAACAACCAAGTCTCTTTCCTTCATGTATACCATCACTGTACAATG
TTTACATTGTGGTGGATTGGAATTAAGTGGGTCGCAGGGGGACAAGCATTTTTTGGAGCACAGC
TGAATTCCTTCATCCACGTGATTATGTACTCATACTATGGGTTAACTGCATTTGGCCCGTGGAT
TCAGAAGTATCTTTGGTGGAAACGATACTTAACCATGTTGCAGCTGGTTCAGTTCCACGTGACC
ATTGGGCACACGGCGCTGTCTCTTTACACTGATTGCCCCTTCCCAAAATGGATGCACTGGGCTC
TCATCGCCTATGCAATCAGCTTCATATTTCTCTTTCTTAACTTCTATGTTCGGACATACAAAGA
GCCTAAGAAAGCAAAAACTGGAAAAACAGCTGTGAATGGTATTTCAGCAAATGGTGTGAGCAAA
TCAGAGAAACAACTAGTGATAGAAAATGGAAAAAAGCAGAAAAATGGAAAAGCGAAAGGAGAGT
AAATTGAACTGGGCCTTAACTGTTGTTGACAGTGAGGAAGCTCCCATTTCATATAAAATTTCAG
GGAAAACAAGCAAATGAGGGTTTTGGGGGTGGGGAGAAAAAGGCAAATGTGCTCTATGTCTTAG
TAACCTTTAGATAGAGTAAAGTGTTAAATACAATGCCCGGATGTTTTATTTATGAAGTTTTATT
TTAAACATTTTTTTTTTATTAGCCTTGTTGTCGTCCAGACCAAAGCAATCATTATGTGACTTTG
GAGGCTCTCCCTCTGTTCACATCCGTTTGTCTAATGCATGACATTTTTCATGTATCTTATATAC
AGTCATTCTTCAGTCTGATGATCACAGAAACACAGTATGAATTTTTTGGCTAAATTACTATTAC
CTACTGATTACAATCAGTTACCTTACATTTTCTAGTCCAAAGCTGGAACTGTAGATACTTTAAA
ATTTGCACATTTGAATTCATTTGCTGACTGGTATGGTCAAATCTCTCCACCTCTAGTCTGAATA
TACCCTTTTGGTTGTAATTAAATTTAAAGAATCTGATGATCTCTGTAGACTCTTAGAGGCTTGA
CGATGATGGTGTTGGTGAAAATAAGAATTACAGTAAAATCCTGTCTAGTGACCCAAAGGTCACC
ATGACTTGCGGCACAAATCACTGTGGGAAACAATTTTTGATGAAAAGACAGCCTTTCAATACTC
CTATTACTATCAGAAGTATATTATGAAAATTAGGATTATTGTCTGATTGGAACATGAAACAACT
CATATCTTTATAAGTAACATCAGAAAAGAGTTACATTTATGTGCTGTTAGAAGAGAGTATGTTG
ATTTTTATCAGGCTTTCCTTGTTTTGATTTGTGGCTGTTACCGATTTTTCATATGTGGAAATAT
ACCTACCTCTTCTGTTGGAAAGAACATTTAAAATTAAATAAATTTTAATTAAAAAATCAAGGAG
TCCTCTAATGTAAATTTTACTATTAGCTTTCGAATCCGCTAGTATTTTTTTTGCCTTTTTTTTC
TTTTTTTTTAACAAATAGCATACACCCAACTTTTCTGTGAAACTATCCTTCTCTTTCAATGTGA
TTAATTTTGGAGTGATATTTTCCTTATAACAAAGTTGCAAGATCTTATTTATTAACTAGATATG
AAGTATAAACCCATTTTGGTGCAATATTCTTGACTCCTTGGTGCTAAAGATCATTAAATTTAGT
GTATGATTGTTACAAGGTGTTAATTATTAAGACACAAAATGAATTAAAGTGAAGAGTAGTCAGA
ACCAGAAAATGAAGTTTACTATGTGTAAATGGAGTGTTTCATGTAATATAAATGAACAACTGGA
AATACACTAGGAAAGAGAACTTGTACATTGTTTTATTACATTGGTTAAATTGTTAGGGGATGTT
GACCAGGGATCATTATAGAGAAAGAAAATGTGACAACAACAAAAAAAGCATGAATATTTCTAAG
TTATCTCAACATGTCAAAACTGCATGTACAGGATGTATGCTGTTTGTGCAGACGAACTATTTTA
GAGTATTTTGTAAACTATAAAATATTTATTGTGCATTAAAATTACACTTTTCCCCAAAGGCATG
CAGTCATGAGAAATATAGAATATTTGCAACATTTAAAATAGTTTGGCCTGAGAGGATTCAGCAC
CTTTGTCTTAGCTGCTCGGTGTGTAATGACTAGAGATTTGTAAATCTTTGTGAACATTCTGTAC
TGGTTCCCCAGACCTCTTCATTCCCTGCTACCTGATTTTAGCACAATAAATATACAACTGCTGT
GGGAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_022281987	(Get FASTA)	NCBI Sequence Viewer
	XP_038348232	(Get FASTA)	NCBI Sequence Viewer
	XP_038348233	(Get FASTA)	NCBI Sequence Viewer
	XP_038410525	(Get FASTA)	NCBI Sequence Viewer
	XP_038410526	(Get FASTA)	NCBI Sequence Viewer
	XP_038474382	(Get FASTA)	NCBI Sequence Viewer
	XP_038474383	(Get FASTA)	NCBI Sequence Viewer
	XP_038539946	(Get FASTA)	NCBI Sequence Viewer
	XP_038539947	(Get FASTA)	NCBI Sequence Viewer
	XP_539015	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	XP_539015 ⟸ XM_539015
- Peptide Label:	isoform X1
- UniProtKB:	J9PBB9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGLLDSEPGSVLNVVSTALNDTVEFYRWTWSITDKRVENWPLMQSPLPTLCISTLYLLFVWLGP KWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGYSYICQSVDYSDNVNEVRIAAAL WWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWWIGIKWVAGGQAFFGAQLNSFIH VIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLVQFHVTIGHTALSLYTDCPFPKWMHWALIAYAI SFIFLFLNFYVRTYKEPKKAKTGKTAVNGISANGVSKSEKQLVIENGKKQKNGKAKGE hide sequence

RefSeq Acc Id:

XP_022281987 ⟸ XM_022426279

- Peptide Label:

isoform X2

- Sequence:

show sequence

MQSPLPTLCISTLYLLFVWLGPKWMKDREPFQMRLVLIIYNFGMVLLNLFIFRELFMGSYNAGY
SYICQSVDYSDNVNEVRIAAALWWYFVSKGVEYLDTVFFILRKKNNQVSFLHVYHHCTMFTLWW
IGIKWVAGGQAFFGAQLNSFIHVIMYSYYGLTAFGPWIQKYLWWKRYLTMLQLVQFHVTIGHTA
LSLYTDCPFPKWMHWALIAYAISFIFLFLNFYVRTYKEPKKAKTGKTAVNGISANGVSKSEKQL
VIENGKKQKNGKAKGE

hide sequence

RefSeq Acc Id:

ENSCAFP00000043098 ⟸ ENSCAFT00000047184

RefSeq Acc Id:	XP_038348232 ⟸ XM_038492304
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038348233 ⟸ XM_038492305
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038474382 ⟸ XM_038618454
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038474383 ⟸ XM_038618455
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038539946 ⟸ XM_038684018
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038539947 ⟸ XM_038684019
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038410525 ⟸ XM_038554597
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038410526 ⟸ XM_038554598
- Peptide Label:	isoform X2

RefSeq Acc Id:

ENSCAFP00845012645 ⟸ ENSCAFT00845016255

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000030132	Ensembl
	ENSCAFG00845009234	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSCAFP00845012645	ENTREZGENE
	ENSCAFP00845012645.1	UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00845016255	ENTREZGENE
	ENSCAFT00845016255.1	UniProtKB/TrEMBL
InterPro	ELO_CS	UniProtKB/TrEMBL
	ELO_fam	UniProtKB/TrEMBL
	ELOVL4	UniProtKB/TrEMBL
NCBI Gene	ELOVL4	ENTREZGENE
PANTHER	PTHR11157	UniProtKB/TrEMBL
Pfam	ELO	UniProtKB/TrEMBL
PROSITE	ELO	UniProtKB/TrEMBL
UniProt	A0A8I3NBA5_CANLF	UniProtKB/TrEMBL
	J9PBB9	ENTREZGENE
VGNC ID	VGNC:40322	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB