DLA-DOA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 12 | 2,563,673 - 2,568,328 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 12 | 2,563,673 - 2,568,328 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 12 | 2,645,022 - 2,649,677 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 12 | 2,894,424 - 2,899,075 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 12 | 2,894,424 - 2,899,075 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 12 | 2,562,685 - 2,567,336 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 12 | 2,644,035 - 2,648,683 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 12 | 2,718,589 - 2,723,244 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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HLA-DOA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 6 | 33,004,182 - 33,009,591 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 33,004,182 - 33,009,591 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 32,971,959 - 32,977,368 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 33,079,937 - 33,085,367 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 6 | 33,081,330 - 33,085,315 | NCBI | | | | | Celera | 6 | 34,520,840 - 34,526,270 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | p21.32 | NCBI | | | | | HuRef | 6 | 32,714,467 - 32,719,897 (-) | NCBI | | HuRef | | | CHM1_1 | 6 | 32,972,734 - 32,978,164 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 32,825,532 - 32,830,941 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
H2-Oa (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 17 | 34,311,353 - 34,314,286 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 17 | 34,311,314 - 34,314,208 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 17 | 34,092,379 - 34,095,234 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 17 | 34,092,340 - 34,095,234 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 17 | 34,229,324 - 34,232,179 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 17 | 33,702,886 - 33,705,688 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 17 | 36,839,367 - 36,842,221 (+) | NCBI | | Celera | | | Cytogenetic Map | 17 | B1 | NCBI | | | | | cM Map | 17 | 17.98 | NCBI | | | | |
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RT1-DOa (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 20 | 4,755,287 - 4,758,491 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 20 | 4,753,587 - 4,756,590 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 20 | 4,753,598 - 4,756,577 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 20 | 5,506,215 - 5,508,610 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 20 | 4,867,962 - 4,870,357 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 20 | 5,349,348 - 5,351,873 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 20 | 3,889,106 - 3,892,360 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 20 | 3,889,370 - 3,892,449 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 20 | 5,968,563 - 5,971,753 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 20 | 4,890,410 - 4,894,048 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 20 | 4,890,638 - 4,894,271 (-) | NCBI | | | | | Celera | 20 | 6,354,703 - 6,357,121 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | p12 | NCBI | | | | |
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LOC102025166 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955437 | 1,603,168 - 1,607,134 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955437 | 1,603,395 - 1,606,800 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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LOC100967723 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 5 | 47,479,615 - 47,485,045 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 43,351,225 - 43,356,655 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 32,573,975 - 32,579,398 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 33,689,171 - 33,694,590 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 33,689,171 - 33,694,576 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
LOC101963482 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404946 | 38,169,344 - 38,173,988 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936476 | 25,787,492 - 25,790,950 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936476 | 25,786,322 - 25,790,881 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
SLA-DOA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 7 | 25,178,884 - 25,182,707 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 7 | 25,178,866 - 25,182,665 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 7 | 29,545,479 - 29,549,278 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
MHC-DOA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 17 | 39,084,785 - 39,090,477 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 17 | 39,085,080 - 39,090,474 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666044 | 32,794,062 - 32,799,722 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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LOC101698840 (Heterocephalus glaber - naked mole-rat) |
|