LOC102152929 (MICOS complex subunit MIC26-like) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: LOC102152929 (MICOS complex subunit MIC26-like) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: LOC102152929
Name: MICOS complex subunit MIC26-like
RGD ID: 12103692
Description: INVOLVED IN cristae formation (inferred); FOUND IN MICOS complex (inferred); mitochondrial inner membrane (inferred); mitochondrion (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: apolipoprotein O pseudogene; MICOS complex subunit MIC26 pseudogene
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.128732,032 - 732,897 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha28960,848 - 961,667 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.028907,894 - 908,713 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.128706,813 - 707,632 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.028750,490 - 751,363 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.028873,422 - 874,241 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in LOC102152929
4 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_038439762   ⟹   XP_038295690
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.028907,894 - 908,713 (-)NCBI
RefSeq Acc Id: XM_038460706   ⟹   XP_038316634
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha28960,848 - 961,667 (-)NCBI
RefSeq Acc Id: XM_038514383   ⟹   XP_038370311
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.128706,813 - 707,632 (-)NCBI
RefSeq Acc Id: XM_038578036   ⟹   XP_038433964
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.028873,422 - 874,241 (-)NCBI
RefSeq Acc Id: XM_038642195   ⟹   XP_038498123
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.028750,490 - 751,363 (-)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_038370311   ⟸   XM_038514383
RefSeq Acc Id: XP_038498123   ⟸   XM_038642195
RefSeq Acc Id: XP_038295690   ⟸   XM_038439762
- UniProtKB: A0A8C0NZ83 (UniProtKB/TrEMBL),   A0A8C0R7K3 (UniProtKB/TrEMBL),   A0A8I3P8W7 (UniProtKB/TrEMBL),   A0A8P0T0Q9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038316634   ⟸   XM_038460706
- UniProtKB: A0A8C0NZ83 (UniProtKB/TrEMBL),   A0A8C0R7K3 (UniProtKB/TrEMBL),   A0A8I3P8W7 (UniProtKB/TrEMBL),   A0A8P0T0Q9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038433964   ⟸   XM_038578036
- UniProtKB: A0A8C0NZ83 (UniProtKB/TrEMBL),   A0A8C0R7K3 (UniProtKB/TrEMBL),   A0A8I3P8W7 (UniProtKB/TrEMBL),   A0A8P0T0Q9 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000044924 UniProtKB/TrEMBL
  ENSCAFG00000049311 UniProtKB/TrEMBL
  ENSCAFG00030019280 UniProtKB/TrEMBL
  ENSCAFG00040022285 UniProtKB/TrEMBL
  ENSCAFG00845020515 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000062836.2 UniProtKB/TrEMBL
  ENSCAFT00000087216.2 UniProtKB/TrEMBL
  ENSCAFT00030035434.1 UniProtKB/TrEMBL
  ENSCAFT00040041358.1 UniProtKB/TrEMBL
  ENSCAFT00845036128 ENTREZGENE
  ENSCAFT00845036128.1 UniProtKB/TrEMBL
InterPro MIC26/MIC27 UniProtKB/TrEMBL
  MIC26/MIC27_animal UniProtKB/TrEMBL
NCBI Gene LOC102152929 ENTREZGENE
PANTHER MICOS COMPLEX SUBUNIT MIC26 UniProtKB/TrEMBL
  PTHR14564 UniProtKB/TrEMBL
Pfam ApoO UniProtKB/TrEMBL
UniProt A0A8C0NZ83 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0R7K3 ENTREZGENE
  A0A8I3P8W7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0T0Q9 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-12 LOC102152929  MICOS complex subunit MIC26-like  LOC102152929  MICOS complex subunit MIC26 pseudogene  Symbol and/or name change 5135510 APPROVED
2017-09-12 LOC102152929  MICOS complex subunit MIC26 pseudogene    apolipoprotein O pseudogene  Symbol and/or name change 5135510 APPROVED