RABEPK (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 9 | 57,857,269 - 57,877,333 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 9 | 57,857,269 - 57,883,761 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 9 | 57,057,134 - 57,077,183 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 9 | 58,777,947 - 58,797,659 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 9 | 58,777,947 - 58,809,553 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 9 | 57,536,110 - 57,556,338 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 9 | 57,852,819 - 57,873,069 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 9 | 57,943,499 - 57,963,812 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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RABEPK (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 9 | 125,200,542 - 125,234,161 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 9 | 125,200,542 - 125,234,161 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 9 | 127,962,821 - 127,996,440 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 9 | 127,002,874 - 127,036,259 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 9 | 98,610,755 - 98,644,425 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | q33.3 | NCBI | | | | | HuRef | 9 | 97,575,423 - 97,609,024 (+) | NCBI | | HuRef | | | CHM1_1 | 9 | 128,111,877 - 128,146,185 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 9 | 137,398,878 - 137,432,478 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Rabepk (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 34,662,946 - 34,690,200 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 34,667,568 - 34,689,924 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 34,774,609 - 34,800,196 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 34,777,556 - 34,799,912 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 34,634,186 - 34,655,311 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 34,600,675 - 34,621,800 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 34,479,143 - 34,500,323 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | B | NCBI | | | | | cM Map | 2 | 22.94 | NCBI | | | | |
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Rabepk (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 38,460,205 - 38,481,077 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 18,061,299 - 18,083,191 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 18,061,574 - 18,083,191 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 21,130,771 - 21,151,000 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 29,715,795 - 29,736,024 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 27,969,432 - 27,989,871 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 13,845,352 - 13,865,843 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 13,845,361 - 13,865,843 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 19,164,922 - 19,185,412 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 13,790,808 - 13,811,327 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 13,687,180 - 13,707,699 (-) | NCBI | | | | | Celera | 3 | 12,783,843 - 12,804,301 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | p11 | NCBI | | | | |
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Rabepk (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955419 | 3,061,838 - 3,091,020 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955419 | 3,061,838 - 3,096,693 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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RABEPK (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 11 | 14,129,490 - 14,167,619 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 9 | 14,131,838 - 14,169,967 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 9 | 96,311,269 - 96,349,433 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 9 | 124,836,057 - 124,863,049 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 9 | 124,836,057 - 124,863,049 (+) | Ensembl | panpan1.1 | | panPan2 | |
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Rabepk (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404947 | 193,552,324 - 193,578,082 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936487 | 13,324,168 - 13,346,638 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936487 | 13,320,988 - 13,346,609 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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RABEPK (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 265,905,210 - 265,929,061 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 265,898,306 - 265,929,062 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 299,672,840 - 299,702,585 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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RABEPK (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 12 | 12,923,405 - 12,953,907 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 12 | 12,927,976 - 12,951,249 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666079 | 3,152,338 - 3,187,313 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Rabepk (Heterocephalus glaber - naked mole-rat) |
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