REPIN1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 16 | 14,659,046 - 14,690,997 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 16 | 14,669,587 - 14,690,502 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 16 | 15,267,536 - 15,299,452 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 16 | 16,373,764 - 16,405,701 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 16 | 16,370,536 - 16,405,695 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 16 | 14,753,883 - 14,785,767 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 16 | 15,334,823 - 15,366,709 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 16 | 15,385,281 - 15,417,211 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
REPIN1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 7 | 150,368,096 - 150,374,039 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 7 | 150,368,189 - 150,374,044 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 7 | 150,065,185 - 150,071,128 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 7 | 149,696,812 - 149,702,066 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 7 | 149,505,905 - 149,508,772 | NCBI | | | | | Celera | 7 | 144,622,973 - 144,628,227 (+) | NCBI | | Celera | | | Cytogenetic Map | 7 | q36.1 | NCBI | | | | | HuRef | 7 | 143,882,207 - 143,887,461 (+) | NCBI | | HuRef | | | CHM1_1 | 7 | 150,072,703 - 150,077,957 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 7 | 151,546,435 - 151,552,378 (+) | NCBI | | T2T-CHM13v2.0 | | | CRA_TCAGchr7v2 | 7 | 149,403,728 - 149,408,982 (+) | NCBI | | | | |
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Repin1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 6 | 48,570,817 - 48,576,016 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 48,570,817 - 48,576,016 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 48,593,883 - 48,599,082 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 48,593,883 - 48,599,082 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 48,543,882 - 48,549,081 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 48,523,526 - 48,528,670 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 49,104,840 - 49,110,039 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | B2.3 | NCBI | | | | | cM Map | 6 | 23.57 | NCBI | | | | |
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Repin1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 4 | 78,879,910 - 78,885,143 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 77,548,724 - 77,554,242 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 77,548,849 - 77,554,257 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 82,756,470 - 82,761,680 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 78,531,969 - 78,537,179 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 76,972,250 - 76,977,460 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 78,232,454 - 78,237,498 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 78,233,332 - 78,236,781 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 142,896,159 - 142,901,182 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 76,688,429 - 76,690,141 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 4 | 72,488,962 - 72,490,674 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q24 | NCBI | | | | |
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Repin1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955491 | 4,973,797 - 4,976,974 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955491 | 4,973,192 - 4,977,970 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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REPIN1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 6 | 186,816,002 - 186,821,239 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 7 | 38,826,266 - 38,831,507 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 7 | 141,984,725 - 141,989,973 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 7 | 154,137,378 - 154,142,614 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 7 | 154,137,478 - 154,141,516 (+) | Ensembl | panpan1.1 | | panPan2 | |
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Repin1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405118 | 6,925,106 - 6,930,053 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936527 | 5,973,982 - 5,977,323 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936527 | 5,973,376 - 5,978,327 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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REPIN1 (Sus scrofa - pig) |
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REPIN1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 21 | 118,512,581 - 118,517,945 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 21 | 118,513,570 - 118,518,862 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666072 | 14,472,102 - 14,477,603 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Repin1 (Heterocephalus glaber - naked mole-rat) |
|